FFCP PHASE1:Hg19::chr16:69791973..69791975,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:69791973..69791975,- | |||
|description=CAGE_peak_at_chr16:69791973..69791975,- | |description=CAGE_peak_at_chr16:69791973..69791975,- | ||
|id=chr16:69791973..69791975,- | |id=chr16:69791973..69791975,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002591;1.96e-12;1!CL:0000244;4.82e-12;4!CL:0000731;4.82e-12;4!CL:0002539;1.46e-10;10!CL:0002262;7.60e-07;2!CL:1000398;7.60e-07;2!CL:0002575;7.60e-07;2!CL:0002253;7.60e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,3.27e-12,4;CL:0000731,3.27e-12,4;CL:0002591,3.45e-12,1;CL:0002539,1.13e-10,10;CL:0002575,4.83e-07,2;CL:0002262,6.07e-07,2;CL:1000398,6.07e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!2.03e-09!235;DOID:14566!6.11e-09!239;DOID:0050687!1.55e-07!143 | |ontology_enrichment_disease=DOID:162!2.03e-09!235;DOID:14566!6.11e-09!239;DOID:0050687!1.55e-07!143 | ||
|ontology_enrichment_disease_v019=DOID:4235;1.96e-12;1!DOID:4468;7.60e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4235,4.31e-12,1;DOID:4468,7.61e-07,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004237;1.46e-10;10!UBERON:0004695;1.46e-10;10!UBERON:0002111;1.46e-10;10!UBERON:0004178;1.46e-10;10!UBERON:0000365;8.11e-10;5!UBERON:0005910;2.51e-08;6!UBERON:0001135;3.28e-07;15!UBERON:0000007;7.60e-07;2!UBERON:0001281;7.60e-07;2!UBERON:0003497;7.60e-07;2!UBERON:0003909;7.60e-07;2!UBERON:0000078;7.60e-07;2!UBERON:0003835;7.60e-07;2!UBERON:0002012;7.60e-07;2!UBERON:0008886;7.60e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004237,1.13e-10,10;UBERON:0004695,1.13e-10,10;UBERON:0002111,1.13e-10,10;UBERON:0004178,1.13e-10,10;UBERON:0000365,5.95e-10,5;UBERON:0005910,1.94e-08,6;UBERON:0001135,2.77e-07,15;UBERON:0001281,6.07e-07,2;UBERON:0003497,6.07e-07,2;UBERON:0003909,6.07e-07,2;UBERON:0003835,6.07e-07,2;UBERON:0000007,8.52e-07,2 | |||
|phase1_expression=0,0,0,1.0007329835313,0,0,0,0,0.261185628199839,0,0.697801167972428,0,0.263766978228454,0.123766352960047,0,0,1.20538905604795,0.730310090387373,0.487932798790507,0.738726348460727,0.204000691244253,0.313454721478088,0,0.273748850145768,0.251085279189606,0.458480434487708,0.0821005894499457,0.236132343941038,0,0,0.309632246632152,0,0,0.739508020333575,0.309868802321207,0,0,0,0.200544447470142,0,0.223915474239924,0,0.257575567634187,0,0.377875943688809,0.242584061187816,0.232429036905685,0,0,0.575384784644301,0.256160706529101,0,0.689491361473237,0,0,0.376484679085209,0,0,0,0,0.639337125799041,0.989553900560148,0.199463657621632,0.426224750532694,0,0.56738522469114,0,0.251248665256743,0,0,1.21079900526674,0,0.316462387440884,0.211255286311942,0,0,0,0.600707571366025,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0.786021525498329,0.205601498999509,0.167186495390678,0,0,0,0.222820913770347,0,0,0,0,0.130059347559878,0.328875809207352,0,0.869409257205157,0,0,0,0.226618685395132,0,0,0,0,0,0,0,0.511946444617674,0,0,0,0.201606743224732,0.267440195783507,0,0,0,0.12786256184353,0.361439152384566,0,0,0,0,0.472674085820339,0.221729397462564,0.351339142772504,0.0654895377488563,0,0.741568885568859,0,0.174129737299267,0.132957960518865,0,0,0,0,0,0.347140501607594,0,0.419499436209906,0.275118041940067,0.208994966536811,0,0.35576626268671,0,0.402829317109147,0,0,0,0.81014194788176,0.357198913136319,0,0.563057402416611,0,0,0.183201743930407,0,0,0.436094052142534,0,0.379891534993739,0.264818361626438,0,0,0,0,0,0.622422070799533,0.134710672069688,0,0.454072282934794,0.576175924479999,0.234321431833797,0.312160076830321,0,0.149448680551801,0.117434498643765,0.971237666208789,0.140450806702248,0.204154171254893,0.368502951935304,0,0,0,0,0,0.168336113954066,0.250237039743928,0.831192346452549,0,0,0.150238058906597,0,0.538168907066586,0,0,0,0.103052529238439,0,0,0.168776332241266,0.389748020644795,0.757301322732344,0.276149695926898,0,0,0.302256294682921,0,0.57978255948989,0,0,0.243947412259191,0.265059536642971,0.232387885739037,0.207322110030741,0,0.36497735907583,0,0.643240938192885,0,0,0,0.236613600079688,0.168584690078102,0.723033089650446,0.55146986366197,0.435758888184812,0,0.404493924480493,0,0,0,1.40241773803446,0.8231480226628,0,0,0,0,0.441463099414651,0.737930631258681,0,0.329250856225877,0,0.100528972411631,0.277765335475589,0,0,0,0.231860809950154,0.234817388471643,0,0.925971025153221,0.380508304469197,0,0,0,0.234004265139238,0.148631162288728,0,0,0.283550194484773,0.268675568108545,0.290633938513962,0.383382679165211,0.492663237895943,0.088048434013226,0.207328115540772,0.144119953416961,0.12624243342638,0.190493682876507,0,0,0,0.102827492703324,0,0.285826432630578,0.672786506072164,0,0.5867062865676,0.387815147273333,0,0,0,0,0.257207374262142,0,0,0.428933980974443,0,0.823240336780769,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0.179060963239896,0.224170287987055,0.591092280605782,0,0,0.254094624222463,0,0,0.335032530668698,0.637938751653163,0,0,0,0.613457458595699,0.500170521059677,0.542530047399471,0.207970861530807,0,0.157702415033935,0.234282829985426,0.300946099727719,0,0,0.664225598535437,0.184369168541703,0.0868836144680828,1.76221041716467,0,0.413536052245775,0.215714200818617,0.213455115606889,0.303127571446259,0,0.30239029332968,0,0.460385919864187,0,0,0,0,0,0,0.355123450626254,0.164254312027618,0.519254429183621,0.232420756919918,0.120859449591622,0.200506470303285,0,0.459257792658427,0.182091168006717,0,1.35359883872224,0.385076685522074,0,0,0.105551628892876,0,0.510281115829547,0.431831832204279,0,0,0,0,0,0.447749509444357,0,0,0,0,0.976135183992909,0,0.366277859273374,0.660075999364704,0,0.650060246036521,0,0.870036464629098,0.616194468458578,0.15350367472613,0.551346289938122,0.322260734604821,0.145016693914229,0.170453254832202,0.0890320356467374,0,0.192190067365106,0.127612712494584,0.30347334256665,0,0,0,1.54016790088044,0,1.73986598415015,0.18532421910392,0.429374660225974,0.372158369359667,0,0,0.255897791311334,0,0,0,0,0.274537029736055,0.235624804691373,0.202182481573316,0,0,0.48763373908959,0,0,0.272999822815972,0,1.13008116620243,0,0,0.438450885253763,0,0,0.608731130888112,0,0.281695602532241,0,0.0982490410131212,0.35667105148125,0,0.211107635297664,0,0.379473173765715,0.699869440489966,0.0962221127255121,0.670302275535787,0,0.282431402330337,0,1.68471475667626,1.33029046061003,0.689170200620878,0,0,0,0.238231775457789,0.822724546172388,0,0.540031437238115,0,0.427296284509893,0,0,0.743212700502875,0,0.782560276832555,0,0.798317485731266,0,0.211673582723883,0.324621940274555,0.842391534340376,0.456469358066384,0.156679895773023,0,0,0,0,0,0,0.307240764308458,0.447352215784832,0.166849141711909,0.586164286206121,0,1.23087398947712,0.270455678475983,0.66614393599564,0,0,0,0.242721043499027,0.222886768554957,0.568272293612826,0,0.593929361665277,0.614321404198464,0,0.281338832821026,0.667852230137435,0.16480387422676,0.844501632511974,0,0.276283915531148,0.7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| ||
|short_description=p@chr16:69791973..69791975,- | |short_description=p@chr16:69791973..69791975,- | ||
}} | }} |
Latest revision as of 11:54, 25 July 2015
Short description: | p@chr16:69791973..69791975, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:69791973..69791975, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 3.27e-12 | 4 |
urothelial cell | 3.27e-12 | 4 |
smooth muscle cell of the pulmonary artery | 3.45e-12 | 1 |
aortic smooth muscle cell | 1.13e-10 | 10 |
central nervous system pericyte | 4.83e-07 | 2 |
endothelial cell of sinusoid | 6.07e-07 | 2 |
endothelial cell of hepatic sinusoid | 6.07e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
blood vessel smooth muscle | 1.13e-10 | 10 |
arterial system smooth muscle | 1.13e-10 | 10 |
artery smooth muscle tissue | 1.13e-10 | 10 |
aorta smooth muscle tissue | 1.13e-10 | 10 |
urothelium | 5.95e-10 | 5 |
transitional epithelium | 1.94e-08 | 6 |
smooth muscle tissue | 2.77e-07 | 15 |
hepatic sinusoid | 6.07e-07 | 2 |
abdomen blood vessel | 6.07e-07 | 2 |
sinusoid | 6.07e-07 | 2 |
abdominal segment blood vessel | 6.07e-07 | 2 |
pituitary gland | 8.52e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
spindle cell sarcoma | 4.31e-12 | 1 |
clear cell adenocarcinoma | 7.61e-07 | 2 |