FFCP PHASE1:Hg19::chr16:68119250..68119293,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4775 | |EntrezGene=4775 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7777 | |HGNC=7777 | ||
|TSSclassifier=strong | |||
|UniProt=B5B2S0,Q12968,B5B2S1 | |UniProt=B5B2S0,Q12968,B5B2S1 | ||
|association_with_transcript=0bp_to_NM_004555,NM_173163,NM_173165_5end | |association_with_transcript=0bp_to_NM_004555,NM_173163,NM_173165_5end | ||
|cluster_id=chr16:68119250..68119293,+ | |||
|description=CAGE_peak_2_at_NFATC3_5end | |description=CAGE_peak_2_at_NFATC3_5end | ||
|id=chr16:68119250..68119293,+ | |id=chr16:68119250..68119293,+ | ||
|ontology_enrichment_celltype=CL:0000037!1.21e-15!172;CL:0000566!1.21e-15!172;CL:0000988!5.15e-14!182;CL:0002032!7.31e-14!165;CL:0000837!7.31e-14!165;CL:0000838!3.56e-12!52;CL:0000542!5.28e-12!53;CL:0000051!5.28e-12!53;CL:0000791!8.62e-10!18;CL:0000789!8.62e-10!18;CL:0002420!8.62e-10!18;CL:0002419!8.62e-10!18;CL:0000790!8.62e-10!18;CL:0000084!1.10e-09!25;CL:0000827!1.10e-09!25;CL:0000738!3.49e-08!140;CL:0000625!7.88e-07!11 | |ontology_enrichment_celltype=CL:0000037!1.21e-15!172;CL:0000566!1.21e-15!172;CL:0000988!5.15e-14!182;CL:0002032!7.31e-14!165;CL:0000837!7.31e-14!165;CL:0000838!3.56e-12!52;CL:0000542!5.28e-12!53;CL:0000051!5.28e-12!53;CL:0000791!8.62e-10!18;CL:0000789!8.62e-10!18;CL:0002420!8.62e-10!18;CL:0002419!8.62e-10!18;CL:0000790!8.62e-10!18;CL:0000084!1.10e-09!25;CL:0000827!1.10e-09!25;CL:0000738!3.49e-08!140;CL:0000625!7.88e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000791;7.24e-10;18!CL:0000789;7.24e-10;18!CL:0002419;7.24e-10;18!CL:0000084;9.31e-10;25!CL:0000542;1.04e-07;53!CL:0000625;7.33e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.41e-16,168;CL:0000988,1.10e-14,177;CL:0002032,1.60e-14,161;CL:0000837,1.60e-14,161;CL:0000838,3.56e-12,52;CL:0000542,5.28e-12,53;CL:0000051,5.28e-12,53;CL:0000791,8.62e-10,18;CL:0000789,8.62e-10,18;CL:0002420,8.62e-10,18;CL:0002419,8.62e-10,18;CL:0000790,8.62e-10,18;CL:0000084,1.10e-09,25;CL:0000827,1.10e-09,25;CL:0000738,1.11e-08,136;CL:0000625,7.88e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000790;7.24e-10;18!CL:0000051;1.04e-07;53 | |||
|ontology_enrichment_disease=DOID:1240!3.21e-10!39;DOID:2531!3.94e-09!51;DOID:0060083!3.94e-09!51;DOID:8692!8.36e-09!31 | |ontology_enrichment_disease=DOID:1240!3.21e-10!39;DOID:2531!3.94e-09!51;DOID:0060083!3.94e-09!51;DOID:8692!8.36e-09!31 | ||
|ontology_enrichment_disease_v019=DOID:8692;1.11e-08;31!DOID:1240;2.33e-08;39 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,3.21e-10,39;DOID:2531,3.94e-09,51;DOID:0060083,3.94e-09,51;DOID:8692,8.36e-09,31 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.51e-08!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.29e-08,114 | |||
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| ||
|short_description=p2@NFATC3 | |short_description=p2@NFATC3 | ||
}} | }} |
Latest revision as of 12:57, 17 September 2015
Short description: | p2@NFATC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NFATC3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_004555, NM_173163, NM_173165_5end |
EntrezGene: | NFATC3 |
HGNC: | 7777 |
UniProt: | B5B2S0Q12968B5B2S1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 2.41e-16 | 168 |
hematopoietic cell | 1.10e-14 | 177 |
hematopoietic oligopotent progenitor cell | 1.60e-14 | 161 |
hematopoietic multipotent progenitor cell | 1.60e-14 | 161 |
lymphoid lineage restricted progenitor cell | 3.56e-12 | 52 |
lymphocyte | 5.28e-12 | 53 |
common lymphoid progenitor | 5.28e-12 | 53 |
mature alpha-beta T cell | 8.62e-10 | 18 |
alpha-beta T cell | 8.62e-10 | 18 |
immature T cell | 8.62e-10 | 18 |
mature T cell | 8.62e-10 | 18 |
immature alpha-beta T cell | 8.62e-10 | 18 |
T cell | 1.10e-09 | 25 |
pro-T cell | 1.10e-09 | 25 |
leukocyte | 1.11e-08 | 136 |
CD8-positive, alpha-beta T cell | 7.88e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.29e-08 | 114 |
Ontology term | p-value | n |
---|---|---|
leukemia | 3.21e-10 | 39 |
hematologic cancer | 3.94e-09 | 51 |
immune system cancer | 3.94e-09 | 51 |
myeloid leukemia | 8.36e-09 | 31 |