FFCP PHASE1:Hg19::chr20:19865607..19865639,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:19865607..19865639,+ | |||
|description=CAGE_peak_at_chr20:19865607..19865639,+ | |description=CAGE_peak_at_chr20:19865607..19865639,+ | ||
|id=chr20:19865607..19865639,+ | |id=chr20:19865607..19865639,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.24e-21!254;CL:0000076!3.13e-21!62;CL:0002076!9.71e-13!43;CL:0002139!3.13e-12!24;CL:0000223!1.29e-11!59;CL:0000071!7.21e-10!18;CL:0002546!7.21e-10!18;CL:0002368!3.01e-09!13;CL:0002159!5.21e-07!13;CL:0000220!6.60e-07!246;CL:0000115!9.29e-07!35 | |ontology_enrichment_celltype=CL:0000066!1.24e-21!254;CL:0000076!3.13e-21!62;CL:0002076!9.71e-13!43;CL:0002139!3.13e-12!24;CL:0000223!1.29e-11!59;CL:0000071!7.21e-10!18;CL:0002546!7.21e-10!18;CL:0002368!3.01e-09!13;CL:0002159!5.21e-07!13;CL:0000220!6.60e-07!246;CL:0000115!9.29e-07!35 | ||
|ontology_enrichment_celltype_v019=CL:0002621;1.34e-18;3!CL:0002076;7.10e-16;42!CL:0002368;1.53e-15;13!CL:0002251;4.76e-10;20!CL:0002138;2.60e-09;6!CL:0002166;6.65e-09;3!CL:0000307;6.65e-09;3!CL:0002541;2.19e-08;3!CL:0002139;3.91e-08;24!CL:0000076;1.84e-07;63!CL:0000511;6.68e-07;1!CL:0002625;6.68e-07;1!CL:0000216;6.68e-07;1!CL:0002379;6.68e-07;1!CL:0002159;9.55e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,6.64e-21,42;CL:0000066,5.40e-19,253;CL:0002621,1.23e-18,3;CL:0000223,7.51e-17,58;CL:0002368,1.60e-15,13;CL:0000076,8.47e-13,63;CL:0002321,3.35e-10,250;CL:0002251,4.01e-10,20;CL:0005020,2.16e-09,6;CL:0002138,2.16e-09,6;CL:0005022,2.16e-09,6;CL:0002166,7.20e-09,3;CL:0000068,7.78e-09,3;CL:0000069,7.78e-09,3;CL:0000307,7.78e-09,3;CL:0000377,7.78e-09,3;CL:0002139,3.81e-08,24;CL:0002541,3.99e-08,3;CL:0000511,4.85e-07,1;CL:0002625,4.85e-07,1;CL:0000216,4.85e-07,1;CL:0002379,7.73e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000223;5.68e-11;58!CL:0005022;2.60e-09;6!CL:0000377;6.65e-09;3 | |||
|ontology_enrichment_disease=DOID:1749!4.21e-10!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.71e-19;14!DOID:3620;6.68e-07;1!DOID:3565;6.68e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,9.35e-20,14;DOID:3620,7.73e-07,1;DOID:3565,7.73e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000487!3.58e-10!22;UBERON:0001986!7.21e-10!18;UBERON:0004638!7.21e-10!18;UBERON:0004852!7.21e-10!18;UBERON:0000992!9.49e-09!13;UBERON:0004176!1.33e-08!22;UBERON:0006914!2.09e-08!25;UBERON:0000991!8.99e-08!21;UBERON:0009196!8.99e-08!21;UBERON:0009117!8.99e-08!21;UBERON:0005564!8.99e-08!21;UBERON:0005156!3.32e-07!59;UBERON:0000990!3.32e-07!59;UBERON:0003133!6.00e-07!48 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;1.34e-18;3!UBERON:0003729;9.11e-16;13!UBERON:0003343;1.33e-13;4!UBERON:0004785;1.33e-13;4!UBERON:0000486;4.40e-12;12!UBERON:0000161;1.31e-10;19!UBERON:0000166;1.31e-10;19!UBERON:0000344;4.76e-10;20!UBERON:0000974;3.13e-09;6!UBERON:0003124;2.19e-08;3!UBERON:0000920;2.19e-08;3!UBERON:0003929;3.03e-08;7!UBERON:0003350;2.89e-07;8!UBERON:0001828;2.89e-07;8!UBERON:0001473;4.32e-07;8!UBERON:0004536;4.32e-07;8!UBERON:0006558;4.32e-07;8!UBERON:0000165;5.22e-07;28!UBERON:0001004;6.30e-07;65!UBERON:0001136;6.68e-07;1!UBERON:0001343;6.68e-07;1!UBERON:0004910;6.68e-07;1!UBERON:0004813;6.68e-07;1!UBERON:0001708;7.09e-07;4!UBERON:0008895;7.09e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,1.23e-18,3;UBERON:0003729,6.94e-16,13;UBERON:0003343,9.05e-14,4;UBERON:0004785,9.05e-14,4;UBERON:0001004,1.18e-10,74;UBERON:0000344,4.01e-10,20;UBERON:0000166,3.78e-09,22;UBERON:0000920,3.99e-08,3;UBERON:0003350,2.81e-07,8;UBERON:0001828,2.81e-07,8;UBERON:0000161,3.28e-07,36;UBERON:0001473,3.78e-07,8;UBERON:0004536,3.78e-07,8;UBERON:0006558,3.78e-07,8;UBERON:0001136,4.85e-07,1;UBERON:0001343,4.85e-07,1;UBERON:0004910,4.85e-07,1;UBERON:0005154,4.85e-07,1;UBERON:0005295,4.85e-07,1;UBERON:0004813,4.85e-07,1;UBERON:0005297,4.85e-07,1;UBERON:0005294,4.85e-07,1;UBERON:0010141,4.85e-07,1;UBERON:0005891,4.85e-07,1;UBERON:0000033,5.40e-07,56;UBERON:0001708,7.53e-07,4;UBERON:0008895,7.53e-07,4;UBERON:0000165,8.52e-07,29;UBERON:0000930,8.52e-07,29 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.246301768349837,0.314843125254717,0,0.383829398097213,0,0,0.90361775633475,1.47901604066715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0.251248665256743,0.521482918420201,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0.087834785693126,0,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0.79504962946682,0,0.694281003215189,0.56530794192401,0.838998872419812,0.275118041940067,0,2.58416759169329,1.77883131343355,3.01248551488203,1.20848795132744,0,0.24406205754817,0.735326160691737,0.81014194788176,0.982297011124877,0,0.788280363383256,0,3.79706263827252,1.09921046358244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0.103052529238439,0,0,0.168776332241266,0,0.252433774244115,0,0,0.355009592516614,0,0,3.28543450377605,3.27295344709002,2.58124135850103,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0.122988438543114,0.171567810298526,0.98775256867763,1.1240175325762,0.402115889646523,0.370353780634118,0,0,0,0,0.234817388471643,0,0,0.190254152234598,0,0,0,0,0,0,3.19166043577833,2.41017665312057,0.358234090811393,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0,0,0,0,0,0.154209693802656,0,0.0821271560138091,0,0.232420756919918,0,3.80962293576241,0.184161977871793,0,0,0,0,0,0,0,0,0,0.340187410553031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,1.30012049207304,1.6068392984416,0,0,0,0,0,0,0,0,1.32227932288782,1.15314040419064,4.08360679982669,0.4046311234222,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.865999014529609,2.01090682660736,3.26672954583968,0,2.15252686335615,0,0.886860307073351,1.1486170010348,0,0,0,0,0,0,0,0,0,0,1.71528151186722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0.222617410045812,0.329607748453519,0,0,0,0,0,0,0,0.179736702294654,0,0,0.394573622547734,0,0,0,0,0,0,0,0,0.1137934482855,0.254253650292766,0,0,0,0,0,0.241192877250816,0,0,0,0,0,0,0.307801034015188,0,0,0.179515288819544,0,0,1.00757352742049,1.06606955203727,0,0,0,0,0,0,0,0,0.210998064528027,0.163232808159148,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,2.15231080825299,0,0.394584402849391,0,0,0.063186579628488,0,0,0,0.330991955875499,0,0,0,0.416024019039416,0,0.685946781900644,3.3082498500553,0.698906672968121,0,0,0,0,0.0969890164884194,0,0.225980740780532,0.548167698587004,0,0,0,0.0801588202515337,0.213452994739353,0,0,0,0,0.14405479798815,0.745515213392595,0,0,0,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0.858452096273142,0,0,0,0,0,0,0,0.196854963029498,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,1.53532157855556,0,0.662091970365432,0,0,0,0,1.19730191562487,0,0,0,0.146552233678082,0,0,0,0,0.704815022316672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0.0620964029413835,0,0.499921631848426,0,0,1.17632909849086,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0.310525913752519,0.414706207840855,0,0,0,0.380805212168795,0.406870733204662,0.363697318405119,0.644463342254931,0.928067519756987,0.796191777397232,0,0,0,0,0,0.428883182749851,0,0,0,0,0,0.308801447160972,0.438568099157414,0.530067437837643,0.578742114812744,0.168942440653073,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0.419638523158333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0,0,0,5.98701082856256,0,1.83428598521679,1.27078232765372,0,0,0,0.376051641746286,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0.255524855279191,0,0,0,0,0.177404740325278,0,0.171488009437418,0,0,0,0.667388411352415,0.078493092850514,0,0.280272163313789,0,0.431855182437243,0,0.214429632529969,0,0,0,0,0.62164849248911,0.3414369541879,0,0,0,0.0852134047591577,0.846774100381858,0,0.62041277132864,0,0.111855431797792,0,0,0,0.307988420568741,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0.196308467114945,0,0,0.169927114687817,0,0,0.399764623699716,0.892769693028288,7.76368717774522,0.240724100067505,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0.103432995861895,0,0,0,0,0.112131862580613,0,0,0.217716747896961,0,0.0673520530145875,0.143444410785353,0,0,0,0,0.538951212639521,0,0.366724332548599,0,0,0,0 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| ||
|short_description=p@chr20:19865607..19865639,+ | |short_description=p@chr20:19865607..19865639,+ | ||
}} | }} |
Latest revision as of 12:15, 28 July 2015
Short description: | p@chr20:19865607..19865639, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:19865607..19865639, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 6.64e-21 | 42 |
epithelial cell | 5.40e-19 | 253 |
gingival epithelial cell | 1.23e-18 | 3 |
endodermal cell | 7.51e-17 | 58 |
respiratory epithelial cell | 1.60e-15 | 13 |
squamous epithelial cell | 8.47e-13 | 63 |
embryonic cell | 3.35e-10 | 250 |
epithelial cell of alimentary canal | 4.01e-10 | 20 |
lymphangioblast | 2.16e-09 | 6 |
endothelial cell of lymphatic vessel | 2.16e-09 | 6 |
vascular lymphangioblast | 2.16e-09 | 6 |
epithelial cell of Malassez | 7.20e-09 | 3 |
duct epithelial cell | 7.78e-09 | 3 |
branched duct epithelial cell | 7.78e-09 | 3 |
tracheal epithelial cell | 7.78e-09 | 3 |
tracheoblast | 7.78e-09 | 3 |
endothelial cell of vascular tree | 3.81e-08 | 24 |
chorionic membrane mesenchymal stem cell | 3.99e-08 | 3 |
androgen binding protein secreting cell | 4.85e-07 | 1 |
seminiferous tubule epithelial cell | 4.85e-07 | 1 |
Sertoli cell | 4.85e-07 | 1 |
meningothelial cell | 7.73e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 1.23e-18 | 3 |
mouth mucosa | 6.94e-16 | 13 |
mucosa of oral region | 9.05e-14 | 4 |
respiratory system mucosa | 9.05e-14 | 4 |
respiratory system | 1.18e-10 | 74 |
mucosa | 4.01e-10 | 20 |
oral opening | 3.78e-09 | 22 |
egg chorion | 3.99e-08 | 3 |
epithelium of mucosa | 2.81e-07 | 8 |
gingiva | 2.81e-07 | 8 |
orifice | 3.28e-07 | 36 |
lymphatic vessel | 3.78e-07 | 8 |
lymph vasculature | 3.78e-07 | 8 |
lymphatic part of lymphoid system | 3.78e-07 | 8 |
mesothelium | 4.85e-07 | 1 |
seminiferous tubule of testis | 4.85e-07 | 1 |
epithelium of male gonad | 4.85e-07 | 1 |
epithelial cord | 4.85e-07 | 1 |
sex cord | 4.85e-07 | 1 |
seminiferous tubule epithelium | 4.85e-07 | 1 |
testis sex cord | 4.85e-07 | 1 |
genital ridge | 4.85e-07 | 1 |
primitive sex cord of indifferent gonad | 4.85e-07 | 1 |
coelomic epithelium | 4.85e-07 | 1 |
head | 5.40e-07 | 56 |
jaw skeleton | 7.53e-07 | 4 |
splanchnocranium | 7.53e-07 | 4 |
mouth | 8.52e-07 | 29 |
stomodeum | 8.52e-07 | 29 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 9.35e-20 | 14 |
central nervous system cancer | 7.73e-07 | 1 |
meningioma | 7.73e-07 | 1 |