FFCP PHASE1:Hg19::chr20:19194889..19194900,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:19194889..19194900,- | |||
|coexpression_cluster_id=C2459 | |||
|description=CAGE_peak_at_chr20:19194889..19194900,- | |description=CAGE_peak_at_chr20:19194889..19194900,- | ||
|id=chr20:19194889..19194900,- | |id=chr20:19194889..19194900,- | ||
|ontology_enrichment_celltype=CL:0002274!2.06e-32!5;CL:0000457!2.06e-32!5;CL:0002191!2.06e-32!5;CL:0000097!2.06e-32!5;CL:0000831!2.06e-32!5;CL:0002028!2.06e-32!5;CL:0000163!5.99e-18!9;CL:0000810!9.44e-08!1;CL:0000895!9.44e-08!1;CL:0002436!9.44e-08!1;CL:0002427!9.44e-08!1;CL:0002428!9.44e-08!1;CL:0002429!9.44e-08!1;CL:0002433!9.44e-08!1;CL:0002431!9.44e-08!1;CL:0002432!9.44e-08!1;CL:0001024!1.39e-07!1 | |ontology_enrichment_celltype=CL:0002274!2.06e-32!5;CL:0000457!2.06e-32!5;CL:0002191!2.06e-32!5;CL:0000097!2.06e-32!5;CL:0000831!2.06e-32!5;CL:0002028!2.06e-32!5;CL:0000163!5.99e-18!9;CL:0000810!9.44e-08!1;CL:0000895!9.44e-08!1;CL:0002436!9.44e-08!1;CL:0002427!9.44e-08!1;CL:0002428!9.44e-08!1;CL:0002429!9.44e-08!1;CL:0002433!9.44e-08!1;CL:0002431!9.44e-08!1;CL:0002432!9.44e-08!1;CL:0001024!1.39e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000333;1.82e-27;5!CL:0000097;4.06e-27;5!CL:0000163;1.41e-15;9!CL:0002321;7.09e-10;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,4.06e-27,5;CL:0002028,4.06e-27,5;CL:0000163,1.41e-15,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:171!5.23e-23!10;DOID:3095!3.69e-10!22;DOID:2994!3.69e-10!22;DOID:9119!1.22e-07!1;DOID:225!2.31e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:171;4.61e-53;10!DOID:3095;1.43e-24;22!DOID:2994;1.43e-24;22!DOID:169;4.34e-23;6!DOID:3193;7.67e-18;2!DOID:962;7.67e-18;2!DOID:1192;2.31e-12;3 | |||
|ontology_enrichment_disease_v019_2=DOID:171,4.61e-53,10;DOID:3095,1.43e-24,22;DOID:2994,1.43e-24,22;DOID:169,4.34e-23,6;DOID:3193,7.67e-18,2;DOID:962,7.67e-18,2;DOID:1192,2.31e-12,3 | |||
|ontology_enrichment_uberon=UBERON:0006834!1.07e-07!1;UBERON:0001301!2.04e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;8.36e-34;4!UBERON:0000923;8.36e-34;4!UBERON:0010316;8.36e-34;4!UBERON:0005291;8.36e-34;4!UBERON:0000013;1.82e-27;5!UBERON:0002410;1.82e-27;5!UBERON:0002050;2.72e-27;5!UBERON:0005423;2.72e-27;5!UBERON:0003714;7.67e-18;2!UBERON:0000010;9.04e-16;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,1.82e-27,5;UBERON:0002410,1.82e-27,5;UBERON:0003714,7.67e-18,2;UBERON:0000010,9.04e-16,8 | |||
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|short_description=p@chr20:19194889..19194900,- | |short_description=p@chr20:19194889..19194900,- | ||
}} | }} |
Latest revision as of 12:13, 28 July 2015
Short description: | p@chr20:19194889..19194900, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:19194889..19194900, - |
Coexpression cluster: | C2459_neuroepithelioma_neuroectodermal_neuroblastoma_Hepatocyte_peripheral_Melanocyte_liver |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 4.06e-27 | 5 |
basophil mast progenitor cell | 4.06e-27 | 5 |
endocrine cell | 1.41e-15 | 9 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 1.82e-27 | 5 |
autonomic nervous system | 1.82e-27 | 5 |
neural tissue | 7.67e-18 | 2 |
peripheral nervous system | 9.04e-16 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 4.61e-53 | 10 |
germ cell and embryonal cancer | 1.43e-24 | 22 |
germ cell cancer | 1.43e-24 | 22 |
neuroendocrine tumor | 4.34e-23 | 6 |
peripheral nerve sheath neoplasm | 7.67e-18 | 2 |
neurofibroma | 7.67e-18 | 2 |
peripheral nervous system neoplasm | 2.31e-12 | 3 |