FFCP PHASE1:Hg19::chr1:94375085..94375096,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2730 | |EntrezGene=2730 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4312 | |HGNC=4312 | ||
|TSSclassifier=strong | |||
|UniProt=P48507 | |UniProt=P48507 | ||
|association_with_transcript=-73bp_to_NM_002061,uc001dqg.1_5end | |association_with_transcript=-73bp_to_NM_002061,uc001dqg.1_5end | ||
|cluster_id=chr1:94375085..94375096,- | |||
|description=CAGE_peak_5_at_GCLM_5end | |description=CAGE_peak_5_at_GCLM_5end | ||
|id=chr1:94375085..94375096,- | |id=chr1:94375085..94375096,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.74e-15!115;UBERON:0000073!2.83e-14!94;UBERON:0001016!2.83e-14!94;UBERON:0005743!9.02e-14!86;UBERON:0001017!2.74e-13!82;UBERON:0000955!3.17e-12!69;UBERON:0006238!3.17e-12!69;UBERON:0001049!2.99e-11!57;UBERON:0005068!2.99e-11!57;UBERON:0006241!2.99e-11!57;UBERON:0007135!2.99e-11!57;UBERON:0002616!1.26e-10!59;UBERON:0003080!1.37e-08!42;UBERON:0002346!2.82e-08!90;UBERON:0002780!4.05e-08!41;UBERON:0001890!4.05e-08!41;UBERON:0006240!4.05e-08!41;UBERON:0003075!5.76e-08!86;UBERON:0007284!5.76e-08!86;UBERON:0000153!6.09e-08!129;UBERON:0007811!6.09e-08!129;UBERON:0001893!3.15e-07!34;UBERON:0002020!3.25e-07!34;UBERON:0003528!3.25e-07!34;UBERON:0000033!3.93e-07!123;UBERON:0002791!6.98e-07!33;UBERON:0001869!7.82e-07!32;UBERON:0000924!8.20e-07!173;UBERON:0006601!8.20e-07!173;UBERON:0003056!9.45e-07!61 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.08e-12,81;UBERON:0001016,5.14e-12,89;UBERON:0000955,4.56e-11,68;UBERON:0006238,4.56e-11,68;UBERON:0007023,6.02e-11,114;UBERON:0000073,4.33e-10,53;UBERON:0002616,4.33e-10,53;UBERON:0001049,6.38e-10,56;UBERON:0005068,6.38e-10,56;UBERON:0006241,6.38e-10,56;UBERON:0007135,6.38e-10,56;UBERON:0003075,1.82e-08,82;UBERON:0007284,1.82e-08,82;UBERON:0002346,4.18e-08,86;UBERON:0011216,2.91e-07,223;UBERON:0003528,9.45e-07,34;UBERON:0002020,9.45e-07,34 | |||
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| ||
|short_description=p5@GCLM | |short_description=p5@GCLM | ||
}} | }} |
Latest revision as of 22:26, 19 September 2015
Short description: | p5@GCLM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_GCLM_5end |
Coexpression cluster: | NA |
Association with transcript: | -73bp_to_NM_002061, uc001dqg.1_5end |
EntrezGene: | GCLM |
HGNC: | 4312 |
UniProt: | P48507 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system | 3.08e-12 | 81 |
nervous system | 5.14e-12 | 89 |
brain | 4.56e-11 | 68 |
future brain | 4.56e-11 | 68 |
adult organism | 6.02e-11 | 114 |
regional part of nervous system | 4.33e-10 | 53 |
regional part of brain | 4.33e-10 | 53 |
neural tube | 6.38e-10 | 56 |
neural rod | 6.38e-10 | 56 |
future spinal cord | 6.38e-10 | 56 |
neural keel | 6.38e-10 | 56 |
neural plate | 1.82e-08 | 82 |
presumptive neural plate | 1.82e-08 | 82 |
neurectoderm | 4.18e-08 | 86 |
organ system subdivision | 2.91e-07 | 223 |
brain grey matter | 9.45e-07 | 34 |
gray matter | 9.45e-07 | 34 |