FFCP PHASE1:Hg19::chr16:56223492..56223503,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:56223492..56223503,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_at_chr16:56223492..56223503,- | |description=CAGE_peak_at_chr16:56223492..56223503,- | ||
|id=chr16:56223492..56223503,- | |id=chr16:56223492..56223503,- | ||
|ontology_enrichment_celltype=CL:0000242!1.72e-10!2;CL:0002535!2.27e-10!2 | |ontology_enrichment_celltype=CL:0000242!1.72e-10!2;CL:0002535!2.27e-10!2 | ||
|ontology_enrichment_celltype_v019=CL:0000123;8.10e-26;2!CL:0000242;8.10e-26;2!CL:0000312;3.42e-11;5!CL:0000240;1.50e-09;6!CL:0000311;1.50e-09;6!CL:0000079;1.50e-09;6!CL:0000237;1.50e-09;6!CL:0000362;8.61e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,7.14e-26,2;CL:0000312,3.26e-11,5;CL:0000240,1.44e-09,6;CL:0000311,1.44e-09,6;CL:0000079,1.44e-09,6;CL:0000237,1.44e-09,6;CL:0000036,1.44e-09,6;CL:0000357,1.44e-09,6;CL:0000114,1.44e-09,6;CL:0000362,8.37e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0009117;6.99e-21;10!UBERON:0005564;6.99e-21;10!CL:0000357;1.50e-09;6!CL:0000114;1.50e-09;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001882!4.69e-19!1;UBERON:0005403!4.69e-19!1;UBERON:0002363!5.62e-19!1;UBERON:0007647!5.62e-19!1;UBERON:0010115!5.62e-19!1;UBERON:0000369!6.77e-19!4;UBERON:0002435!6.77e-19!4;UBERON:0000204!6.77e-19!4;UBERON:0010082!6.77e-19!4;UBERON:0009663!3.14e-11!7;UBERON:0001873!2.07e-10!2;UBERON:0010122!2.07e-10!2;UBERON:0006955!2.27e-10!2;UBERON:0004801!2.27e-10!2;UBERON:0001897!2.99e-10!2;UBERON:0000473!3.52e-10!8;UBERON:0002360!3.58e-10!2;UBERON:0000094!3.58e-10!2;UBERON:0007645!3.58e-10!2;UBERON:0007023!1.50e-09!115;UBERON:0002308!6.11e-09!9;UBERON:0002420!6.11e-09!9;UBERON:0000125!6.11e-09!9;UBERON:0007245!6.11e-09!9;UBERON:0010009!6.11e-09!9;UBERON:0010011!6.11e-09!9;UBERON:0000454!6.11e-09!9;UBERON:0001049!8.40e-08!57;UBERON:0005068!8.40e-08!57;UBERON:0006241!8.40e-08!57;UBERON:0007135!8.40e-08!57;UBERON:0003135!1.20e-07!11;UBERON:0002616!1.53e-07!59;UBERON:0001017!1.62e-07!82;UBERON:0005383!2.32e-07!3;UBERON:0005382!2.32e-07!3;UBERON:0002771!2.63e-07!3;UBERON:0003075!3.00e-07!86;UBERON:0007284!3.00e-07!86;UBERON:0005743!3.65e-07!86;UBERON:0002780!3.71e-07!41;UBERON:0001890!3.71e-07!41;UBERON:0006240!3.71e-07!41;UBERON:0003080!5.37e-07!42;UBERON:0002346!6.40e-07!90 | |ontology_enrichment_uberon=UBERON:0001882!4.69e-19!1;UBERON:0005403!4.69e-19!1;UBERON:0002363!5.62e-19!1;UBERON:0007647!5.62e-19!1;UBERON:0010115!5.62e-19!1;UBERON:0000369!6.77e-19!4;UBERON:0002435!6.77e-19!4;UBERON:0000204!6.77e-19!4;UBERON:0010082!6.77e-19!4;UBERON:0009663!3.14e-11!7;UBERON:0001873!2.07e-10!2;UBERON:0010122!2.07e-10!2;UBERON:0006955!2.27e-10!2;UBERON:0004801!2.27e-10!2;UBERON:0001897!2.99e-10!2;UBERON:0000473!3.52e-10!8;UBERON:0002360!3.58e-10!2;UBERON:0000094!3.58e-10!2;UBERON:0007645!3.58e-10!2;UBERON:0007023!1.50e-09!115;UBERON:0002308!6.11e-09!9;UBERON:0002420!6.11e-09!9;UBERON:0000125!6.11e-09!9;UBERON:0007245!6.11e-09!9;UBERON:0010009!6.11e-09!9;UBERON:0010011!6.11e-09!9;UBERON:0000454!6.11e-09!9;UBERON:0001049!8.40e-08!57;UBERON:0005068!8.40e-08!57;UBERON:0006241!8.40e-08!57;UBERON:0007135!8.40e-08!57;UBERON:0003135!1.20e-07!11;UBERON:0002616!1.53e-07!59;UBERON:0001017!1.62e-07!82;UBERON:0005383!2.32e-07!3;UBERON:0005382!2.32e-07!3;UBERON:0002771!2.63e-07!3;UBERON:0003075!3.00e-07!86;UBERON:0007284!3.00e-07!86;UBERON:0005743!3.65e-07!86;UBERON:0002780!3.71e-07!41;UBERON:0001890!3.71e-07!41;UBERON:0006240!3.71e-07!41;UBERON:0003080!5.37e-07!42;UBERON:0002346!6.40e-07!90 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;8.65e-26;8!UBERON:0003135;4.28e-19;11!UBERON:0000991;1.53e-10;21!UBERON:0003101;4.14e-10;22!UBERON:0000079;4.14e-10;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,8.65e-26,8;UBERON:0003135,4.28e-19,11;UBERON:0000991,1.53e-10,21;UBERON:0009196,1.53e-10,21;UBERON:0009117,1.53e-10,21;UBERON:0005564,1.53e-10,21;UBERON:0004176,4.14e-10,22;UBERON:0003101,4.14e-10,22;UBERON:0000079,4.14e-10,22 | |||
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|short_description=p@chr16:56223492..56223503,- | |short_description=p@chr16:56223492..56223503,- | ||
}} | }} |
Latest revision as of 09:56, 25 July 2015
Short description: | p@chr16:56223492..56223503, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:56223492..56223503, - |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 7.14e-26 | 2 |
keratinocyte | 3.26e-11 | 5 |
stratified squamous epithelial cell | 1.44e-09 | 6 |
keratin accumulating cell | 1.44e-09 | 6 |
stratified epithelial cell | 1.44e-09 | 6 |
keratinizing barrier epithelial cell | 1.44e-09 | 6 |
epithelial fate stem cell | 1.44e-09 | 6 |
stratified epithelial stem cell | 1.44e-09 | 6 |
surface ectodermal cell | 1.44e-09 | 6 |
epidermal cell | 8.37e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
testis | 8.65e-26 | 8 |
male reproductive organ | 4.28e-19 | 11 |
gonad | 1.53e-10 | 21 |
indifferent external genitalia | 1.53e-10 | 21 |
indifferent gonad | 1.53e-10 | 21 |
gonad primordium | 1.53e-10 | 21 |
external genitalia | 4.14e-10 | 22 |
male organism | 4.14e-10 | 22 |
male reproductive system | 4.14e-10 | 22 |