FFCP PHASE1:Hg19::chr16:55600580..55600632,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84290 | |EntrezGene=84290 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16371 | |HGNC=16371 | ||
|TSSclassifier=strong | |||
|UniProt=P04632,Q96L46 | |UniProt=P04632,Q96L46 | ||
|association_with_transcript=0bp_to_ENST00000457326,NM_032330,uc002eid.1_5end | |association_with_transcript=0bp_to_ENST00000457326,NM_032330,uc002eid.1_5end | ||
|cluster_id=chr16:55600580..55600632,+ | |||
|coexpression_cluster_id=C441 | |||
|description=CAGE_peak_1_at_CAPNS2_5end | |description=CAGE_peak_1_at_CAPNS2_5end | ||
|id=chr16:55600580..55600632,+ | |id=chr16:55600580..55600632,+ | ||
|ontology_enrichment_celltype=CL:0002076!1.17e-26!43;CL:0000223!6.13e-19!59;CL:0002368!2.78e-18!13;CL:0002159!6.00e-15!13;CL:0002251!3.26e-14!21;CL:0000622!5.14e-11!5;CL:0002202!9.13e-11!9;CL:0002632!9.13e-11!9;CL:0000066!3.32e-10!254;CL:0000244!4.10e-09!4;CL:0000731!4.10e-09!4;CL:0000154!4.32e-09!6;CL:0002621!9.26e-08!3;CL:0000076!2.43e-07!62;CL:0000362!2.94e-07!8;CL:0000068!3.86e-07!3;CL:0000069!3.86e-07!3;CL:0000307!3.86e-07!3;CL:0000377!3.86e-07!3;CL:0002328!4.20e-07!3;CL:0002623!7.16e-07!3;CL:0002077!8.88e-07!33 | |ontology_enrichment_celltype=CL:0002076!1.17e-26!43;CL:0000223!6.13e-19!59;CL:0002368!2.78e-18!13;CL:0002159!6.00e-15!13;CL:0002251!3.26e-14!21;CL:0000622!5.14e-11!5;CL:0002202!9.13e-11!9;CL:0002632!9.13e-11!9;CL:0000066!3.32e-10!254;CL:0000244!4.10e-09!4;CL:0000731!4.10e-09!4;CL:0000154!4.32e-09!6;CL:0002621!9.26e-08!3;CL:0000076!2.43e-07!62;CL:0000362!2.94e-07!8;CL:0000068!3.86e-07!3;CL:0000069!3.86e-07!3;CL:0000307!3.86e-07!3;CL:0000377!3.86e-07!3;CL:0002328!4.20e-07!3;CL:0002623!7.16e-07!3;CL:0002077!8.88e-07!33 | ||
|ontology_enrichment_celltype_v019=CL:0002368;8.95e-26;13!CL:0002076;1.50e-24;42!CL:0002159;4.24e-16;14!CL:0002202;5.27e-15;9!CL:0002632;5.27e-15;9!CL:0002251;1.90e-13;20!CL:0000244;2.62e-12;4!CL:0000731;2.62e-12;4!CL:0002621;2.11e-10;3!CL:0000622;2.35e-10;5!CL:0000307;1.66e-09;3!CL:0002328;1.84e-09;3!CL:0000240;6.32e-09;6!CL:0000311;6.32e-09;6!CL:0000079;6.32e-09;6!CL:0000237;6.32e-09;6!CL:0000362;6.37e-09;9!CL:0000154;1.27e-08;6!CL:0002077;9.52e-08;34!CL:0000317;1.33e-07;2!CL:1000448;1.33e-07;2!CL:0002308;1.33e-07;2!CL:0002140;1.33e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,5.45e-32,42;CL:0002368,8.95e-26,13;CL:0000223,1.40e-23,58;CL:0002159,3.76e-16,14;CL:0002202,5.27e-15,9;CL:0002632,5.27e-15,9;CL:0002251,2.01e-13,20;CL:0000066,7.13e-13,253;CL:0000244,2.51e-12,4;CL:0000731,2.51e-12,4;CL:0002621,2.11e-10,3;CL:0000622,2.44e-10,5;CL:0000068,1.61e-09,3;CL:0000069,1.61e-09,3;CL:0000307,1.61e-09,3;CL:0000377,1.61e-09,3;CL:0002328,1.81e-09,3;CL:0000240,6.26e-09,6;CL:0000311,6.26e-09,6;CL:0000079,6.26e-09,6;CL:0000237,6.26e-09,6;CL:0000036,6.26e-09,6;CL:0000357,6.26e-09,6;CL:0000114,6.26e-09,6;CL:0000362,6.32e-09,9;CL:0000154,1.31e-08,6;CL:0002077,1.52e-08,34;CL:0000317,1.31e-07,2;CL:1000448,1.31e-07,2;CL:0002308,1.31e-07,2;CL:0002140,1.31e-07,2;CL:0000076,2.48e-07,63;CL:0000575,9.83e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000223;4.49e-12;58!CL:0000377;1.66e-09;3!CL:0000357;6.32e-09;6!CL:0000114;6.32e-09;6 | |||
|ontology_enrichment_disease=DOID:1749!3.70e-15!14 | |ontology_enrichment_disease=DOID:1749!3.70e-15!14 | ||
|ontology_enrichment_disease_v019=DOID:1749;1.87e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.95e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0001004!9.64e-21!72;UBERON:0000166!3.62e-19!21;UBERON:0000161!1.13e-18!35;UBERON:0000165!1.68e-15!28;UBERON:0000930!1.68e-15!28;UBERON:0004119!3.17e-14!169;UBERON:0000925!3.17e-14!169;UBERON:0006595!3.17e-14!169;UBERON:0003102!5.30e-13!95;UBERON:0000065!9.00e-12!53;UBERON:0001444!9.75e-11!48;UBERON:0007196!1.09e-10!14;UBERON:0001558!1.09e-10!14;UBERON:0003729!4.31e-10!5;UBERON:0001007!2.03e-09!155;UBERON:0001555!2.03e-09!155;UBERON:0007026!2.03e-09!155;UBERON:0000974!7.17e-09!10;UBERON:0005178!1.33e-08!34;UBERON:0002224!1.33e-08!34;UBERON:0005181!2.92e-08!35;UBERON:0001044!3.29e-08!6;UBERON:0003293!3.29e-08!6;UBERON:0003294!3.29e-08!6;UBERON:0010047!3.29e-08!6;UBERON:0000167!3.29e-08!6;UBERON:0003343!4.57e-08!4;UBERON:0004785!4.57e-08!4;UBERON:0001949!9.26e-08!3;UBERON:0000078!1.01e-07!18;UBERON:0003126!1.69e-07!7;UBERON:0001005!1.69e-07!7;UBERON:0000365!2.91e-07!5;UBERON:0001723!3.41e-07!3;UBERON:0001033!3.41e-07!3;UBERON:0010056!3.41e-07!3;UBERON:0004815!4.20e-07!3;UBERON:0002031!4.20e-07!3;UBERON:0004921!8.30e-07!129;UBERON:0004185!8.30e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0007196;4.31e-14;15!UBERON:0001558;4.31e-14;15!UBERON:0000165;2.98e-13;28!UBERON:0000486;9.07e-12;12!UBERON:0000161;2.86e-11;19!UBERON:0000166;2.86e-11;19!UBERON:0001949;2.11e-10;3!UBERON:0003126;2.57e-10;7!UBERON:0001005;2.57e-10;7!UBERON:0000365;7.51e-10;5!UBERON:0004815;1.84e-09;3!UBERON:0002031;1.84e-09;3!UBERON:0005910;3.30e-08;6!UBERON:0000974;3.91e-08;6!UBERON:0003729;4.64e-08;13!UBERON:0002419;1.33e-07;2!UBERON:0007771;1.33e-07;2!UBERON:0003297;1.33e-07;2!UBERON:0001821;1.33e-07;2!UBERON:0003487;1.33e-07;2!UBERON:0001820;1.33e-07;2!UBERON:0006562;2.30e-07;2!UBERON:0005178;2.69e-07;34!UBERON:0002224;2.69e-07;34!UBERON:0001003;2.70e-07;15!UBERON:0007376;2.70e-07;15!UBERON:0005181;3.84e-07;35!UBERON:0000341;4.26e-07;2!UBERON:0007811;4.28e-07;52!UBERON:0010371;8.07e-07;31!UBERON:0003127;9.69e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000161,2.84e-17,36;UBERON:0001004,3.84e-17,74;UBERON:0003102,1.26e-16,99;UBERON:0004119,6.50e-16,160;UBERON:0000925,6.50e-16,160;UBERON:0006595,6.50e-16,160;UBERON:0000166,1.25e-14,22;UBERON:0007196,4.27e-14,15;UBERON:0001558,4.27e-14,15;UBERON:0000165,1.12e-12,29;UBERON:0000930,1.12e-12,29;UBERON:0000153,3.45e-11,62;UBERON:0007811,3.45e-11,62;UBERON:0000065,1.99e-10,54;UBERON:0001949,2.11e-10,3;UBERON:0003126,2.50e-10,7;UBERON:0001005,2.50e-10,7;UBERON:0000365,7.25e-10,5;UBERON:0000033,7.74e-10,56;UBERON:0001007,1.30e-09,145;UBERON:0001555,1.30e-09,145;UBERON:0007026,1.30e-09,145;UBERON:0004815,1.81e-09,3;UBERON:0002031,1.81e-09,3;UBERON:0001444,6.50e-09,49;UBERON:0005910,3.20e-08,6;UBERON:0005178,3.60e-08,34;UBERON:0002224,3.60e-08,34;UBERON:0003729,4.70e-08,13;UBERON:0005181,7.14e-08,35;UBERON:0002419,1.31e-07,2;UBERON:0007771,1.31e-07,2;UBERON:0003297,1.31e-07,2;UBERON:0001821,1.31e-07,2;UBERON:0003487,1.31e-07,2;UBERON:0001820,1.31e-07,2;UBERON:0005089,1.31e-07,2;UBERON:0005088,1.31e-07,2;UBERON:0001003,2.69e-07,15;UBERON:0007376,2.69e-07,15;UBERON:0007383,2.69e-07,15;UBERON:0004921,2.91e-07,118;UBERON:0000341,4.39e-07,2;UBERON:0003127,9.55e-07,2 | |||
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|short_description=p1@CAPNS2 | |short_description=p1@CAPNS2 | ||
}} | }} |
Latest revision as of 00:30, 17 September 2015
Short description: | p1@CAPNS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CAPNS2_5end |
Coexpression cluster: | C441_keratoacanthoma_skin_tongue_esophagus_cervical_salivary_Sebocyte |
Association with transcript: | 0bp_to_ENST00000457326, NM_032330, uc002eid.1_5end |
EntrezGene: | CAPNS2 |
HGNC: | 16371 |
UniProt: | P04632Q96L46 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.95e-09 | 14 |