FFCP PHASE1:Hg19::chr11:65430617..65430624,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:65430617..65430624,-
|short_description=p8@RELA
|description=CAGE_peak_8_at_RELA_5end
|association_with_transcript=-52bp_to_ENST00000406246_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5970 | |EntrezGene=5970 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9955 | |HGNC=9955 | ||
|TSSclassifier=strong | |||
|UniProt=Q04206 | |UniProt=Q04206 | ||
|association_with_transcript=-52bp_to_ENST00000406246_5end | |||
|cluster_id=chr11:65430617..65430624,- | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_8_at_RELA_5end | |||
|id=chr11:65430617..65430624,- | |||
|ontology_enrichment_celltype=CL:0000860!3.10e-14!45;CL:0002057!8.33e-14!42;CL:0000839!2.24e-08!70;CL:0000766!4.68e-07!76;CL:0002194!7.63e-07!63;CL:0000576!7.63e-07!63;CL:0000040!7.63e-07!63;CL:0000559!7.63e-07!63;CL:0000557!8.95e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.04e-44;33!CL:0002057;3.04e-44;33!CL:0000473;3.82e-32;39!CL:0000234;3.82e-32;39!CL:0000576;5.90e-20;48!CL:0000766;2.67e-11;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.93e-37,42;CL:0002057,1.93e-37,42;CL:0000473,3.94e-32,48;CL:0000234,3.94e-32,48;CL:0002194,1.05e-24,59;CL:0000576,1.05e-24,59;CL:0000040,1.05e-24,59;CL:0000559,1.05e-24,59;CL:0002009,9.54e-24,61;CL:0000839,1.32e-21,66;CL:0000766,1.49e-21,72;CL:0000557,3.26e-21,67;CL:0000763,9.42e-13,108;CL:0000049,9.42e-13,108;CL:0002087,1.90e-10,115;CL:0002031,7.98e-10,120;CL:0000738,3.80e-09,136;CL:0000988,1.68e-07,177;CL:0002032,5.17e-07,161;CL:0000837,5.17e-07,161 | |||
|ontology_enrichment_development_v019=CL:0002057;1.18e-26;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.24e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002133;3.98e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.69e-18,76;UBERON:0001474,1.71e-16,82;UBERON:0004765,1.28e-14,90;UBERON:0002405,5.35e-14,93;UBERON:0002390,4.76e-13,98;UBERON:0003061,4.76e-13,98;UBERON:0001434,1.07e-12,100;UBERON:0002193,2.03e-11,108;UBERON:0002133,1.87e-09,2;UBERON:0003081,4.47e-09,203;UBERON:0002204,1.87e-07,167 | |||
|phase1_expression=0,0.214100523890983,0.281908808191942,0,0,0,0,0,0.261185628199839,0,0,0.655324116390517,0,0.123766352960047,0.331397375727916,0,0,0,0.487932798790507,0,0.204000691244253,0.313454721478088,0.286235987131057,0.136874425072884,0,0.152826811495903,0,0,0.393364276848904,0,0.309632246632152,0,0.6024118375565,0,0,0,0,0,0.200544447470142,0.217010870715852,0,0.32389366601898,0,0.436194716338694,0.755751887377619,0.727752183563449,0.929716147622738,0.411167888021826,1.85823822537062,13.2338500468189,8.70946402198942,9.69577142543199,1.72372840368309,1.29096936716765,4.06279459783025,0.941211697713023,0.545812300115692,0.674170453335254,1.53041946185451,0.962787081228281,1.27867425159808,4.61791820261403,3.59034583718937,4.68847225585964,2.32167390902867,1.70215567407342,3.11411124497787,6.28121663141858,4.69334626578181,8.25317609879443,4.23779651843358,2.20966581592539,0.632924774881769,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0.426730222566507,0,0,0,0,0,0,0.382273228125229,0,0.560508562981536,0,0.786839080455332,0.393010762749165,0.205601498999509,0,0,0,0,0,0,0,0,0.128091319725675,0,0.164437904603676,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.403213486449465,0.534880391567015,0.579297615531196,0,0,0,0,0.50133791063589,0,0,0.486634870302636,0.283604451492204,0,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0.198762407366705,0.860234595106124,0.347140501607594,0,0.419499436209906,0.550236083880135,0.417989933073621,0.258416759169329,0,0.66944122552934,0,0,0.488124115096339,1.10298924103761,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,1.06748995729705,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0.206651562351531,2.37600571456411,0.247266929278557,0,0.718618141816238,0.168336113954066,0.250237039743928,0,0,0.30648779579902,0.45071417671979,0,0.179389635688862,0,0,0,0.103052529238439,0,0.18611685633159,0,0,0.504867548488229,0.0920498986422993,0.161646056818812,0,0.10075209822764,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0.435758888184812,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0.201057944823262,0,0,0,0,0,0,0.577465791044295,0,0.190254152234598,2.37061319387782,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0.088048434013226,0.829312462163088,0.864719720501769,0.75745460055828,0.063497894292169,0.381988425558278,0,0,0.205654985406647,0,0,0.112131084345361,0,0,0.129271715757778,0,0,0.26593811658487,0,0.257207374262142,0,0,0,0,0.823240336780769,0,0,0,0,0,0.499864955910285,0,0,0,0,1.14861935834114,1.42636905040718,0,0.205476322550383,0,0,0.788123040807709,0.431255149719035,0.513372145118994,0,0,0.773288812777695,0,1.27587750330633,0,0,1.24324654030811,0,0,0,0,0.178428988797162,0,0.234282829985426,0,2.27407504055985,0,0,0.368738337083406,0.260650843404249,0,0,0,0.215714200818617,0.213455115606889,0,0,0.907170879989041,0,0,0.280660094433074,0,0,0,0,0.154209693802656,0.355123450626254,0.246381468041427,0,0,0,0.40101294060657,0.184161977871793,0,0.182091168006717,0,0.451199612907412,0.15403067420883,3.13739907670742,0,0.211103257785751,0,0.170093705276516,0,0,0.541892875087706,1.00337954770971,0.254876273045038,0.831076008928724,0,0.438519753291869,0.784306353074702,0,0.656029291399411,0,0.824328093181778,0,0,0.574265537996172,0,0,0.290012154876366,0.154048617114644,0,0,0.107420244868274,0,0.255679882248303,0.0890320356467374,0.165284915360978,0,0.127612712494584,0,0,0,2.0911118104818,0,0,0.869932992075073,0,0,0,0.316379424718726,0.190630193923825,0.255897791311334,0,0,0,0,0,0.117812402345686,0,0,0,0,0.243713489631284,0,0.272999822815972,0.141405431953713,0,0,0,0,0,0.655894752046633,0.608731130888112,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0.670302275535787,0,0.564862804660675,0.43050537267123,0,1.33029046061003,0.459446800413919,0,0.764637207142375,0,0,0,0,0,0.79312517629427,0,0.962479855263359,0.490080431962063,0,0,0.0711418433484141,0,0,0,0.423347165447766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0.222886768554957,0,0,0.296964680832639,0.307160702099232,0,0.140669416410513,0.222617410045812,0.329607748453519,0,0.597743964753209,0.276283915531148,0,0.102268682502155,0.123084805461069,0.311039587661807,0,0.358042349351218,0,0.493217028184668,0,0,0,0.0927680981618513,0,0,0.0874599999961957,2.17499872630438,0,0,0,0,0,0,0,0.723578631752448,0,0.110579259931225,0,0.219385397153973,0.10893846351899,0.139423744278603,0.307801034015188,1.13942055847001,0,0,0,0.31900115973192,0.274792780205587,0,0,0,0,0,0,0,0,0.158936578980379,0.210998064528027,0.163232808159148,0,0,0,0.265372693510018,0,0,0.123563938946503,0.104421949505455,0.471807930864739,0.802577647298789,0.234264445725339,0,0,0,0.394584402849391,0,0,0.252746318513952,0,0.103688191397247,0.664653872707185,0.330991955875499,0.313932918407225,1.19472429772959,0,0,0.173559738335131,0,0.34823682632161,0,0.171986032471617,0.0967563312890851,0.438535902517113,0.246346371159628,0.484945082442097,0.529536760149002,0,0.274083849293502,0,0.0633107959558787,0,0.320635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| ||
|short_description=p8@RELA | |||
}} | }} |
Latest revision as of 10:42, 19 September 2015
Short description: | p8@RELA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_RELA_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | -52bp_to_ENST00000406246_5end |
EntrezGene: | RELA |
HGNC: | 9955 |
UniProt: | Q04206 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.93e-37 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.93e-37 | 42 |
defensive cell | 3.94e-32 | 48 |
phagocyte | 3.94e-32 | 48 |
monopoietic cell | 1.05e-24 | 59 |
monocyte | 1.05e-24 | 59 |
monoblast | 1.05e-24 | 59 |
promonocyte | 1.05e-24 | 59 |
macrophage dendritic cell progenitor | 9.54e-24 | 61 |
myeloid lineage restricted progenitor cell | 1.32e-21 | 66 |
myeloid leukocyte | 1.49e-21 | 72 |
granulocyte monocyte progenitor cell | 3.26e-21 | 67 |
myeloid cell | 9.42e-13 | 108 |
common myeloid progenitor | 9.42e-13 | 108 |
nongranular leukocyte | 1.90e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 7.98e-10 | 120 |
leukocyte | 3.80e-09 | 136 |
hematopoietic cell | 1.68e-07 | 177 |
hematopoietic oligopotent progenitor cell | 5.17e-07 | 161 |
hematopoietic multipotent progenitor cell | 5.17e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.69e-18 | 76 |
bone element | 1.71e-16 | 82 |
skeletal element | 1.28e-14 | 90 |
immune system | 5.35e-14 | 93 |
hematopoietic system | 4.76e-13 | 98 |
blood island | 4.76e-13 | 98 |
skeletal system | 1.07e-12 | 100 |
hemolymphoid system | 2.03e-11 | 108 |
atrioventricular valve | 1.87e-09 | 2 |
lateral plate mesoderm | 4.47e-09 | 203 |
musculoskeletal system | 1.87e-07 | 167 |