FFCP PHASE1:Hg19::chr11:65201095..65201135,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:65201095..65201135,+
|short_description=p@chr11:65201095..65201135,+
|description=CAGE_peak_at_chr11:65201095..65201135,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:65201095..65201135,+ | |||
|coexpression_cluster_id=C1640 | |||
|description=CAGE_peak_at_chr11:65201095..65201135,+ | |||
|id=chr11:65201095..65201135,+ | |||
|ontology_enrichment_celltype=CL:0002057!9.68e-11!42;CL:0000860!2.25e-09!45;CL:0000766!1.28e-08!76;CL:0002009!4.73e-08!65;CL:0002194!1.40e-07!63;CL:0000576!1.40e-07!63;CL:0000040!1.40e-07!63;CL:0000559!1.40e-07!63;CL:0000557!4.48e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.48e-10;33!CL:0002057;1.48e-10;33!CL:0000473;9.02e-08;39!CL:0000234;9.02e-08;39!CL:0000576;2.52e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.36e-11,42;CL:0002057,2.36e-11,42;CL:0000766,6.06e-11,72;CL:0000473,1.77e-10,48;CL:0000234,1.77e-10,48;CL:0002009,8.18e-10,61;CL:0002194,1.54e-09,59;CL:0000576,1.54e-09,59;CL:0000040,1.54e-09,59;CL:0000559,1.54e-09,59;CL:0000557,1.57e-08,67;CL:0000839,5.56e-08,66 | |||
|ontology_enrichment_development_v019=CL:0002057;1.43e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.91e-14!115;UBERON:0001017!1.33e-07!82;UBERON:0000955!2.61e-07!69;UBERON:0006238!2.61e-07!69;UBERON:0002616!4.95e-07!59;UBERON:0001049!5.15e-07!57;UBERON:0005068!5.15e-07!57;UBERON:0006241!5.15e-07!57;UBERON:0007135!5.15e-07!57;UBERON:0005743!7.17e-07!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.75e-14,114;UBERON:0001049,1.35e-08,56;UBERON:0005068,1.35e-08,56;UBERON:0006241,1.35e-08,56;UBERON:0007135,1.35e-08,56;UBERON:0001017,1.91e-08,81;UBERON:0001016,3.36e-08,89;UBERON:0002371,2.17e-07,76;UBERON:0000955,4.98e-07,68;UBERON:0006238,4.98e-07,68;UBERON:0000073,6.96e-07,53;UBERON:0002616,6.96e-07,53 | |||
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| ||
|short_description=p@chr11:65201095..65201135,+ | |||
}} | }} |
Latest revision as of 00:35, 24 July 2015
Short description: | p@chr11:65201095..65201135, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:65201095..65201135, + |
Coexpression cluster: | C1640_heart_Cardiac_skeletal_acute_Hepatocyte_renal_CD14 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.36e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.36e-11 | 42 |
myeloid leukocyte | 6.06e-11 | 72 |
defensive cell | 1.77e-10 | 48 |
phagocyte | 1.77e-10 | 48 |
macrophage dendritic cell progenitor | 8.18e-10 | 61 |
monopoietic cell | 1.54e-09 | 59 |
monocyte | 1.54e-09 | 59 |
monoblast | 1.54e-09 | 59 |
promonocyte | 1.54e-09 | 59 |
granulocyte monocyte progenitor cell | 1.57e-08 | 67 |
myeloid lineage restricted progenitor cell | 5.56e-08 | 66 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.75e-14 | 114 |
neural tube | 1.35e-08 | 56 |
neural rod | 1.35e-08 | 56 |
future spinal cord | 1.35e-08 | 56 |
neural keel | 1.35e-08 | 56 |
central nervous system | 1.91e-08 | 81 |
nervous system | 3.36e-08 | 89 |
bone marrow | 2.17e-07 | 76 |
brain | 4.98e-07 | 68 |
future brain | 4.98e-07 | 68 |
regional part of nervous system | 6.96e-07 | 53 |
regional part of brain | 6.96e-07 | 53 |