FFCP PHASE1:Hg19::chr1:66798231..66798235,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5142 | |EntrezGene=5142 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=8781 | |HGNC=8781 | ||
|TSSclassifier=strong | |||
|UniProt=B4DG71 | |UniProt=B4DG71 | ||
|association_with_transcript=134bp_to_AK294441_5end | |association_with_transcript=134bp_to_AK294441_5end | ||
|cluster_id=chr1:66798231..66798235,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_23_at_PDE4B_5end | |description=CAGE_peak_23_at_PDE4B_5end | ||
|id=chr1:66798231..66798235,+ | |id=chr1:66798231..66798235,+ | ||
|ontology_enrichment_celltype=CL:0000738!4.91e-36!140;CL:0002087!6.20e-28!119;CL:0000037!3.09e-27!172;CL:0000566!3.09e-27!172;CL:0000988!5.72e-27!182;CL:0002031!1.13e-24!124;CL:0002032!3.35e-23!165;CL:0000837!3.35e-23!165;CL:0002057!8.59e-19!42;CL:0000860!7.12e-17!45;CL:0000766!9.66e-16!76;CL:0000838!1.66e-13!52;CL:0002009!3.78e-13!65;CL:0000542!4.48e-13!53;CL:0000051!4.48e-13!53;CL:0000791!5.55e-13!18;CL:0000789!5.55e-13!18;CL:0002420!5.55e-13!18;CL:0002419!5.55e-13!18;CL:0000790!5.55e-13!18;CL:0002194!1.11e-12!63;CL:0000576!1.11e-12!63;CL:0000040!1.11e-12!63;CL:0000559!1.11e-12!63;CL:0000557!6.07e-12!71;CL:0000839!3.52e-11!70;CL:0000763!5.71e-11!112;CL:0000049!5.71e-11!112;CL:0000134!1.44e-09!358;CL:0000084!3.20e-09!25;CL:0000827!3.20e-09!25;CL:0002320!6.67e-09!365;CL:0000624!5.55e-08!6;CL:0000625!6.24e-08!11;CL:0000219!1.39e-07!390;CL:0000080!4.94e-07!6;CL:0000048!5.68e-07!430 | |ontology_enrichment_celltype=CL:0000738!4.91e-36!140;CL:0002087!6.20e-28!119;CL:0000037!3.09e-27!172;CL:0000566!3.09e-27!172;CL:0000988!5.72e-27!182;CL:0002031!1.13e-24!124;CL:0002032!3.35e-23!165;CL:0000837!3.35e-23!165;CL:0002057!8.59e-19!42;CL:0000860!7.12e-17!45;CL:0000766!9.66e-16!76;CL:0000838!1.66e-13!52;CL:0002009!3.78e-13!65;CL:0000542!4.48e-13!53;CL:0000051!4.48e-13!53;CL:0000791!5.55e-13!18;CL:0000789!5.55e-13!18;CL:0002420!5.55e-13!18;CL:0002419!5.55e-13!18;CL:0000790!5.55e-13!18;CL:0002194!1.11e-12!63;CL:0000576!1.11e-12!63;CL:0000040!1.11e-12!63;CL:0000559!1.11e-12!63;CL:0000557!6.07e-12!71;CL:0000839!3.52e-11!70;CL:0000763!5.71e-11!112;CL:0000049!5.71e-11!112;CL:0000134!1.44e-09!358;CL:0000084!3.20e-09!25;CL:0000827!3.20e-09!25;CL:0002320!6.67e-09!365;CL:0000624!5.55e-08!6;CL:0000625!6.24e-08!11;CL:0000219!1.39e-07!390;CL:0000080!4.94e-07!6;CL:0000048!5.68e-07!430 | ||
|ontology_enrichment_celltype_v019=CL:0000860;7.88e-15;33!CL:0002057;7.88e-15;33!CL:0000236;9.28e-15;13!CL:0000898;2.14e-13;3!CL:0000624;2.10e-11;6!CL:0000771;2.28e-10;2!CL:0002087;3.44e-10;104!CL:0000766;7.56e-10;69!CL:0000473;8.36e-10;39!CL:0000234;8.36e-10;39!CL:0000815;9.79e-10;2!CL:0000792;9.79e-10;2!CL:0002677;9.79e-10;2!CL:0000094;2.33e-09;8!CL:0000576;4.16e-09;48!CL:0000738;2.12e-08;136!CL:0000542;2.17e-08;53!CL:0000453;3.95e-08;5!CL:0000791;7.96e-08;18!CL:0000789;7.96e-08;18!CL:0002419;7.96e-08;18!CL:0000945;1.45e-07;24!CL:0000775;5.88e-07;3!CL:0000081;8.42e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.66e-32,136;CL:0000037,2.71e-26,168;CL:0000988,1.52e-24,177;CL:0002032,1.12e-22,161;CL:0000837,1.12e-22,161;CL:0002087,7.49e-22,115;CL:0002031,9.39e-21,120;CL:0000860,5.76e-17,42;CL:0002057,5.76e-17,42;CL:0000766,4.79e-15,72;CL:0000473,1.90e-14,48;CL:0000234,1.90e-14,48;CL:0000236,1.27e-13,14;CL:0000898,3.49e-13,3;CL:0000763,1.71e-12,108;CL:0000049,1.71e-12,108;CL:0002009,2.94e-12,61;CL:0000624,3.73e-11,6;CL:0002194,6.18e-11,59;CL:0000576,6.18e-11,59;CL:0000040,6.18e-11,59;CL:0000559,6.18e-11,59;CL:0000557,7.04e-11,67;CL:0000838,1.38e-10,52;CL:0000771,2.19e-10,2;CL:0000542,2.45e-10,53;CL:0000051,2.45e-10,53;CL:0000134,8.73e-10,354;CL:0000815,1.27e-09,2;CL:0000792,1.27e-09,2;CL:0002677,1.27e-09,2;CL:0000839,1.79e-09,66;CL:0002320,1.97e-09,361;CL:0000094,2.56e-09,8;CL:0000453,3.20e-08,5;CL:0000219,3.44e-08,386;CL:0000791,1.08e-07,18;CL:0000789,1.08e-07,18;CL:0002420,1.08e-07,18;CL:0002419,1.08e-07,18;CL:0000790,1.08e-07,18;CL:0000945,1.47e-07,24;CL:0000826,1.47e-07,24;CL:0000775,6.91e-07,3;CL:0000034,8.09e-07,441;CL:0000081,9.02e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;7.30e-13;42!CL:0000051;2.17e-08;53!CL:0000790;7.96e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.44e-13!112;UBERON:0002390!1.45e-12!102;UBERON:0003061!1.45e-12!102;UBERON:0001474!2.35e-11!86;UBERON:0002371!4.69e-11!80;UBERON:0004765!2.46e-09!101;UBERON:0001434!2.46e-09!101;UBERON:0002405!5.59e-09!115;UBERON:0002384!5.16e-08!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,1.61e-12,82;UBERON:0004765,4.70e-11,90;UBERON:0002371,1.38e-10,76;UBERON:0002390,9.49e-10,98;UBERON:0003061,9.49e-10,98;UBERON:0001434,1.48e-09,100;UBERON:0002405,3.46e-09,93;UBERON:0002384,5.96e-09,371;UBERON:0002193,1.73e-08,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0.0787107813136792,0,0.767658796194425,0.619264493264304,0,0,0,0.0774672005803016,0,1.17440175733939,2.76997704265939,0.601633342410425,1.51907609501096,0,0,0.257575567634187,0.436194716338694,0,0,0,0.411167888021826,0.619412741790207,0.863077176966451,1.0246428261164,0.47296445977717,2.75796544589295,0,0,1.12945403725563,0,2.02251136000576,3.06083892370903,2.88836124368484,0,0.329851300186716,0.199463657621632,0.426224750532694,2.61188314765726,2.8369261234557,3.11411124497787,0,0.521482918420201,0.217188844705117,3.02699751316684,2.94622108790052,2.53169909952708,0.422510572623884,0,0,0.112328631146495,0.450530678524519,0.48217676009124,0,0,0,0,0,0,0,1.20118796110804,1.14950487990897,1.32208974556972,2.86216126360609,1.70763890732835,1.17447437874188,3.05818582500183,0,1.68152568894461,0,0.393419540227666,0.393010762749165,1.02800749499755,0.334372990781356,2.28145586643513,0,1.94826728407911,0.557052284425868,2.3568472597987,0.886135578334485,2.16643091012012,0,0.390178042679635,0.164437904603676,0,0.869409257205157,0.296573126324121,0.535081656179426,0,0.113309342697566,1.14966148080576,1.37450978193052,1.77113784413652,0.318565414324097,0.651083453856419,0.950452044448374,0.602300476311091,0,2.49861453104692,0.236777252044017,0,1.20964045934839,0.267440195783507,0.579297615531196,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0.715471872916026,1.71598473234038,0.371457501329565,0.39752481473341,0,0,0,0.838998872419812,0,0.208994966536811,0,0,0.66944122552934,0.402829317109147,0.760272105718513,0,0,0,0.357198913136319,0.22452937262617,0,1.53316637465883,0,0,7.9068250461638,7.75560528296651,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0.772921620136887,0,0.675105328965065,0.584622030967192,0,0.184099797284599,0,0.710019185033229,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288732895522148,0,0.570762456703795,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0.126995788584338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788123040807709,0.431255149719035,0.898401253958239,0.254094624222463,0,0,0,0,2.24702107184155,0,7.45947924184864,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,2.06768026122887,0.647142602455851,0.533637789017222,0,0,0,0,0.460385919864187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0.308033580176089,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,3.3780065300479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0.455768223388005,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593042257361244,0.370691816839509,0.104421949505455,0,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.50106246126651,0,0,0,0,0.195551382734803,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0.687481272035051,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,3.59958226482401,0,0.182248669974074,0,0,0,0,1.07572403599707,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0.129282956361551,0,0.342173675768659,0,0,0,0,0,0,0.365377795142688,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0.570930667089935,0,0,0,0,0,0,0.189403005275089,0,0,0,0.151230923763239,0.310874401165561,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.974301544196942,1.32864840313363,1.63565394255844,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41070377476274,0.918736432059601,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0.381382095467167,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0.313972371402056,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0.150962843566674,0.0771741581079447,0,2.82190377816914,0,0.471353094203252,0.196308467114945,0,0,0,0.375935671919414,0.0644578879735772,0,0,0,0,0,0,0.143339583151451,0.315543124386369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0,0,0,0,0,0,0,0.684466602170562,0.202056159043763,0.286888821570705,0,0,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0.0787107813136792,0,0.767658796194425,0.619264493264304,0,0,0,0.0774672005803016,0,1.17440175733939,2.76997704265939,0.601633342410425,1.51907609501096,0,0,0.257575567634187,0.436194716338694,0,0,0,0.411167888021826,0.619412741790207,0.863077176966451,1.0246428261164,0.47296445977717,2.75796544589295,0,0,1.12945403725563,0,2.02251136000576,3.06083892370903,2.88836124368484,0,0.329851300186716,0.199463657621632,0.426224750532694,2.61188314765726,2.8369261234557,3.11411124497787,0,0.521482918420201,0.217188844705117,3.02699751316684,2.94622108790052,2.53169909952708,0.422510572623884,0,0,0.112328631146495,0.450530678524519,0.48217676009124,0,0,0,0,0,0,0,1.20118796110804,1.14950487990897,1.32208974556972,2.86216126360609,1.70763890732835,1.17447437874188,3.05818582500183,0,1.68152568894461,0,0.393419540227666,0.393010762749165,1.02800749499755,0.334372990781356,2.28145586643513,0,1.94826728407911,0.557052284425868,2.3568472597987,0.886135578334485,2.16643091012012,0,0.390178042679635,0.164437904603676,0,0.869409257205157,0.296573126324121,0.535081656179426,0,0.113309342697566,1.14966148080576,1.37450978193052,1.77113784413652,0.318565414324097,0.651083453856419,0.950452044448374,0.602300476311091,0,2.49861453104692,0.236777252044017,0,1.20964045934839,0.267440195783507,0.579297615531196,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0.715471872916026,1.71598473234038,0.371457501329565,0.39752481473341,0,0,0,0.838998872419812,0,0.208994966536811,0,0,0.66944122552934,0.402829317109147,0.760272105718513,0,0,0,0.357198913136319,0.22452937262617,0,1.53316637465883,0,0,7.9068250461638,7.75560528296651,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0.772921620136887,0,0.675105328965065,0.584622030967192,0,0.184099797284599,0,0.710019185033229,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288732895522148,0,0.570762456703795,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0.126995788584338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788123040807709,0.431255149719035,0.898401253958239,0.254094624222463,0,0,0,0,2.24702107184155,0,7.45947924184864,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,2.06768026122887,0.647142602455851,0.533637789017222,0,0,0,0,0.460385919864187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0.308033580176089,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,3.3780065300479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0.455768223388005,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593042257361244,0.370691816839509,0.104421949505455,0,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.50106246126651,0,0,0,0,0.195551382734803,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0.687481272035051,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,3.59958226482401,0,0.182248669974074,0,0,0,0,1.07572403599707,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0.129282956361551,0,0.342173675768659,0,0,0,0,0,0,0.365377795142688,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0.570930667089935,0,0,0,0,0,0,0.189403005275089,0,0,0,0.151230923763239,0.310874401165561,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.974301544196942,1.32864840313363,1.63565394255844,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41070377476274,0.918736432059601,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0.381382095467167,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0.313972371402056,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0.150962843566674,0.0771741581079447,0,2.82190377816914,0,0.471353094203252,0.196308467114945,0,0,0,0.375935671919414,0.0644578879735772,0,0,0,0,0,0,0.143339583151451,0.315543124386369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0,0,0,0,0,0,0,0.684466602170562,0.202056159043763,0.286888821570705,0,0,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | ||
|short_description=p23@PDE4B | |short_description=p23@PDE4B | ||
}} | }} |
Latest revision as of 00:26, 19 September 2015
Short description: | p23@PDE4B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_23_at_PDE4B_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 134bp_to_AK294441_5end |
EntrezGene: | PDE4B |
HGNC: | 8781 |
UniProt: | B4DG71 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone element | 1.61e-12 | 82 |
skeletal element | 4.70e-11 | 90 |
bone marrow | 1.38e-10 | 76 |
hematopoietic system | 9.49e-10 | 98 |
blood island | 9.49e-10 | 98 |
skeletal system | 1.48e-09 | 100 |
immune system | 3.46e-09 | 93 |
connective tissue | 5.96e-09 | 371 |
hemolymphoid system | 1.73e-08 | 108 |