FFCP PHASE1:Hg19::chr1:54751075..54751101,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000426901,uc001cxi.1_5end | |association_with_transcript=0bp_to_ENST00000426901,uc001cxi.1_5end | ||
|cluster_id=chr1:54751075..54751101,+ | |||
|coexpression_cluster_id=C386 | |||
|description=CAGE_peak_1_at_ENST00000426901_5end,CAGE_peak_1_at_uc001cxi.1_5end | |description=CAGE_peak_1_at_ENST00000426901_5end,CAGE_peak_1_at_uc001cxi.1_5end | ||
|id=chr1:54751075..54751101,+ | |id=chr1:54751075..54751101,+ | ||
|ontology_enrichment_celltype=CL:0000084!1.76e-38!25;CL:0000827!1.76e-38!25;CL:0000791!2.24e-36!18;CL:0000789!2.24e-36!18;CL:0002420!2.24e-36!18;CL:0002419!2.24e-36!18;CL:0000790!2.24e-36!18;CL:0000625!1.12e-31!11;CL:0000838!2.46e-18!52;CL:0000542!6.66e-18!53;CL:0000051!6.66e-18!53;CL:0000738!1.00e-12!140;CL:0002087!3.71e-11!119;CL:0000842!4.44e-11!3;CL:0000037!3.83e-09!172;CL:0000566!3.83e-09!172;CL:0000224!2.04e-08!4;CL:0000988!2.72e-08!182;CL:0000893!3.84e-08!2;CL:0002489!3.84e-08!2;CL:0000809!3.84e-08!2;CL:0000808!3.84e-08!2;CL:0000894!3.84e-08!2;CL:0000806!3.84e-08!2;CL:0000807!3.84e-08!2;CL:0000805!3.84e-08!2;CL:0002425!3.84e-08!2;CL:0002031!1.57e-07!124 | |ontology_enrichment_celltype=CL:0000084!1.76e-38!25;CL:0000827!1.76e-38!25;CL:0000791!2.24e-36!18;CL:0000789!2.24e-36!18;CL:0002420!2.24e-36!18;CL:0002419!2.24e-36!18;CL:0000790!2.24e-36!18;CL:0000625!1.12e-31!11;CL:0000838!2.46e-18!52;CL:0000542!6.66e-18!53;CL:0000051!6.66e-18!53;CL:0000738!1.00e-12!140;CL:0002087!3.71e-11!119;CL:0000842!4.44e-11!3;CL:0000037!3.83e-09!172;CL:0000566!3.83e-09!172;CL:0000224!2.04e-08!4;CL:0000988!2.72e-08!182;CL:0000893!3.84e-08!2;CL:0002489!3.84e-08!2;CL:0000809!3.84e-08!2;CL:0000808!3.84e-08!2;CL:0000894!3.84e-08!2;CL:0000806!3.84e-08!2;CL:0000807!3.84e-08!2;CL:0000805!3.84e-08!2;CL:0002425!3.84e-08!2;CL:0002031!1.57e-07!124 | ||
|ontology_enrichment_celltype_v019=CL:0000625;6.10e-43;11!CL:0000084;2.40e-38;25!CL:0000791;4.83e-26;18!CL:0000789;4.83e-26;18!CL:0002419;4.83e-26;18!CL:0000542;9.36e-10;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,6.52e-43,11;CL:0000084,2.50e-38,25;CL:0000827,2.50e-38,25;CL:0000791,5.02e-26,18;CL:0000789,5.02e-26,18;CL:0002420,5.02e-26,18;CL:0002419,5.02e-26,18;CL:0000790,5.02e-26,18;CL:0000838,9.73e-18,52;CL:0000542,2.23e-17,53;CL:0000051,2.23e-17,53;CL:0002087,9.75e-09,115;CL:0000738,1.19e-08,136;CL:0002031,8.26e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000790;4.83e-26;18!CL:0000051;9.36e-10;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.52e-17!15;UBERON:0000179!1.52e-17!15;UBERON:0000463!1.52e-17!15;UBERON:0002370!6.20e-15!4;UBERON:0005058!6.20e-15!4;UBERON:0009113!6.20e-15!4;UBERON:0003295!6.20e-15!4;UBERON:0005562!6.20e-15!4;UBERON:0004177!9.54e-13!7;UBERON:0003351!5.73e-10!6;UBERON:0001042!7.79e-09!10;UBERON:0009145!7.79e-09!10;UBERON:0006562!5.34e-08!11 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@ENST00000426901,p1@uc001cxi.1 | |short_description=p1@ENST00000426901,p1@uc001cxi.1 | ||
}} | }} |
Latest revision as of 09:13, 28 July 2015
Short description: | p1@ENST00000426901, p1@uc001cxi.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000426901_5end, CAGE_peak_1_at_uc001cxi.1_5end |
Coexpression cluster: | C386_chronic_acute_Hodgkin_NK_thymus_liver_blood |
Association with transcript: | 0bp_to_ENST00000426901, uc001cxi.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 6.52e-43 | 11 |
T cell | 2.50e-38 | 25 |
pro-T cell | 2.50e-38 | 25 |
mature alpha-beta T cell | 5.02e-26 | 18 |
alpha-beta T cell | 5.02e-26 | 18 |
immature T cell | 5.02e-26 | 18 |
mature T cell | 5.02e-26 | 18 |
immature alpha-beta T cell | 5.02e-26 | 18 |
lymphoid lineage restricted progenitor cell | 9.73e-18 | 52 |
lymphocyte | 2.23e-17 | 53 |
common lymphoid progenitor | 2.23e-17 | 53 |
nongranular leukocyte | 9.75e-09 | 115 |
leukocyte | 1.19e-08 | 136 |
hematopoietic lineage restricted progenitor cell | 8.26e-07 | 120 |