FFCP PHASE1:Hg19::chr1:44820685..44820695,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79033 | |EntrezGene=79033 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17276 | |HGNC=17276 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=214bp_to_ENST00000495828_5end | |association_with_transcript=214bp_to_ENST00000495828_5end | ||
|cluster_id=chr1:44820685..44820695,- | |||
|description=CAGE_peak_10_at_ERI3_5end | |description=CAGE_peak_10_at_ERI3_5end | ||
|id=chr1:44820685..44820695,- | |id=chr1:44820685..44820695,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002363;5.04e-34;2!CL:0000062;1.12e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002363,5.04e-34,2;CL:0000008,5.04e-34,2;CL:0000062,2.63e-07,11;CL:0000375,2.63e-07,11;CL:0000335,2.63e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000008;5.04e-34;2!UBERON:0009117;6.13e-08;10!UBERON:0005564;6.13e-08;10!CL:0000335;2.47e-07;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.26e-17!57;UBERON:0005068!3.26e-17!57;UBERON:0006241!3.26e-17!57;UBERON:0007135!3.26e-17!57;UBERON:0002616!1.86e-16!59;UBERON:0000955!1.48e-14!69;UBERON:0006238!1.48e-14!69;UBERON:0002780!2.36e-14!41;UBERON:0001890!2.36e-14!41;UBERON:0006240!2.36e-14!41;UBERON:0003080!6.30e-14!42;UBERON:0001893!1.81e-13!34;UBERON:0003075!2.36e-13!86;UBERON:0007284!2.36e-13!86;UBERON:0002346!1.68e-12!90;UBERON:0003056!1.70e-12!61;UBERON:0000033!1.99e-12!123;UBERON:0001869!2.32e-12!32;UBERON:0002791!6.63e-12!33;UBERON:0005743!8.21e-12!86;UBERON:0000153!1.57e-11!129;UBERON:0007811!1.57e-11!129;UBERON:0001017!1.90e-11!82;UBERON:0000073!2.91e-11!94;UBERON:0001016!2.91e-11!94;UBERON:0001950!5.56e-10!20;UBERON:0002020!1.13e-09!34;UBERON:0003528!1.13e-09!34;UBERON:0007023!1.17e-09!115;UBERON:0001896!2.81e-09!3;UBERON:0005290!2.81e-09!3;UBERON:0010096!2.81e-09!3;UBERON:0002619!5.78e-09!22;UBERON:0004121!1.21e-08!169;UBERON:0000200!2.40e-08!6;UBERON:0000924!2.77e-08!173;UBERON:0006601!2.77e-08!173;UBERON:0000956!9.80e-08!25;UBERON:0000203!9.80e-08!25;UBERON:0000369!2.97e-07!4;UBERON:0002435!2.97e-07!4;UBERON:0000204!2.97e-07!4;UBERON:0010082!2.97e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0003566;5.04e-34;2!UBERON:0001777;5.04e-34;2!UBERON:0003891;8.69e-18;4!UBERON:0000964;8.69e-18;4!UBERON:0010409;8.69e-18;4!UBERON:0000473;1.35e-09;8!UBERON:0010313;6.13e-08;10!UBERON:0003135;2.47e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003566,5.04e-34,2;UBERON:0001777,5.04e-34,2;UBERON:0003891,8.69e-18,4;UBERON:0000964,8.69e-18,4;UBERON:0010409,8.69e-18,4;UBERON:0004348,8.69e-18,4;UBERON:0005427,8.69e-18,4;UBERON:0000473,1.24e-09,8;UBERON:0010313,6.13e-08,10;UBERON:0002342,6.13e-08,10;UBERON:0005062,6.13e-08,10;UBERON:0003135,2.32e-07,11 | |||
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| ||
|short_description=p10@ERI3 | |short_description=p10@ERI3 | ||
}} | }} |
Latest revision as of 06:04, 18 September 2015
Short description: | p10@ERI3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_ERI3_5end |
Coexpression cluster: | NA |
Association with transcript: | 214bp_to_ENST00000495828_5end |
EntrezGene: | ERI3 |
HGNC: | 17276 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
keratocyte | 5.04e-34 | 2 |
migratory cranial neural crest cell | 5.04e-34 | 2 |
osteoblast | 2.63e-07 | 11 |
osteoprogenitor cell | 2.63e-07 | 11 |
mesenchyme condensation cell | 2.63e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
head connective tissue | 5.04e-34 | 2 |
substantia propria of cornea | 5.04e-34 | 2 |
stroma | 8.69e-18 | 4 |
cornea | 8.69e-18 | 4 |
eye surface | 8.69e-18 | 4 |
optic eminence | 8.69e-18 | 4 |
corneal primordium | 8.69e-18 | 4 |
testis | 1.24e-09 | 8 |
neural crest-derived structure | 6.13e-08 | 10 |
neural crest | 6.13e-08 | 10 |
neural fold | 6.13e-08 | 10 |
male reproductive organ | 2.32e-07 | 11 |