FFCP PHASE1:Hg19::chr16:20753114..20753157,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55623 | |EntrezGene=55623 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23807 | |HGNC=23807 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NXG2,Q6MZT3 | |UniProt=Q9NXG2,Q6MZT3 | ||
|association_with_transcript=41bp_to_ENST00000396083,NM_017736,uc002dho.2,uc002dhp.2_5end | |association_with_transcript=41bp_to_ENST00000396083,NM_017736,uc002dho.2,uc002dhp.2_5end | ||
|cluster_id=chr16:20753114..20753157,- | |||
|coexpression_cluster_id=C867 | |||
|description=CAGE_peak_1_at_THUMPD1_5end | |description=CAGE_peak_1_at_THUMPD1_5end | ||
|id=chr16:20753114..20753157,- | |id=chr16:20753114..20753157,- | ||
|ontology_enrichment_celltype=CL:0000542!2.16e-17!53;CL:0000051!2.16e-17!53;CL:0000838!2.45e-17!52;CL:0000037!2.29e-15!172;CL:0000566!2.29e-15!172;CL:0000738!7.60e-14!140;CL:0000988!2.01e-13!182;CL:0002032!2.84e-13!165;CL:0000837!2.84e-13!165;CL:0000791!5.69e-11!18;CL:0000789!5.69e-11!18;CL:0002420!5.69e-11!18;CL:0002419!5.69e-11!18;CL:0000790!5.69e-11!18;CL:0002031!4.59e-10!124;CL:0002087!7.52e-10!119;CL:0000084!1.09e-09!25;CL:0000827!1.09e-09!25;CL:0000625!3.05e-08!11;CL:0000945!3.10e-07!24;CL:0000826!3.10e-07!24;CL:0000236!4.28e-07!14 | |ontology_enrichment_celltype=CL:0000542!2.16e-17!53;CL:0000051!2.16e-17!53;CL:0000838!2.45e-17!52;CL:0000037!2.29e-15!172;CL:0000566!2.29e-15!172;CL:0000738!7.60e-14!140;CL:0000988!2.01e-13!182;CL:0002032!2.84e-13!165;CL:0000837!2.84e-13!165;CL:0000791!5.69e-11!18;CL:0000789!5.69e-11!18;CL:0002420!5.69e-11!18;CL:0002419!5.69e-11!18;CL:0000790!5.69e-11!18;CL:0002031!4.59e-10!124;CL:0002087!7.52e-10!119;CL:0000084!1.09e-09!25;CL:0000827!1.09e-09!25;CL:0000625!3.05e-08!11;CL:0000945!3.10e-07!24;CL:0000826!3.10e-07!24;CL:0000236!4.28e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0000791;6.00e-11;18!CL:0000789;6.00e-11;18!CL:0002419;6.00e-11;18!CL:0000542;1.72e-10;53!CL:0000084;1.26e-09;25!CL:0000625;3.00e-08;11!CL:0000945;2.70e-07;24!CL:0000236;4.38e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,2.16e-17,53;CL:0000051,2.16e-17,53;CL:0000838,2.45e-17,52;CL:0000037,8.54e-16,168;CL:0000738,2.54e-14,136;CL:0000988,2.85e-14,177;CL:0002032,1.15e-13,161;CL:0000837,1.15e-13,161;CL:0000791,5.69e-11,18;CL:0000789,5.69e-11,18;CL:0002420,5.69e-11,18;CL:0002419,5.69e-11,18;CL:0000790,5.69e-11,18;CL:0002031,1.84e-10,120;CL:0002087,2.96e-10,115;CL:0000084,1.09e-09,25;CL:0000827,1.09e-09,25;CL:0000625,3.05e-08,11;CL:0000945,3.10e-07,24;CL:0000826,3.10e-07,24;CL:0000236,4.28e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000790;6.00e-11;18!CL:0000051;1.72e-10;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.98e-11!115 | |ontology_enrichment_uberon=UBERON:0007023!4.98e-11!115 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.13e-11,114 | |||
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|short_description=p1@THUMPD1 | |short_description=p1@THUMPD1 | ||
}} | }} |
Latest revision as of 02:26, 25 September 2015
Short description: | p1@THUMPD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_THUMPD1_5end |
Coexpression cluster: | C867_CD4_CD8_Natural_CD19_Peripheral_cerebellum_Mast |
Association with transcript: | 41bp_to_ENST00000396083, NM_017736, uc002dho.2, uc002dhp.2_5end |
EntrezGene: | THUMPD1 |
HGNC: | 23807 |
UniProt: | Q9NXG2Q6MZT3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 2.16e-17 | 53 |
common lymphoid progenitor | 2.16e-17 | 53 |
lymphoid lineage restricted progenitor cell | 2.45e-17 | 52 |
hematopoietic stem cell | 8.54e-16 | 168 |
leukocyte | 2.54e-14 | 136 |
hematopoietic cell | 2.85e-14 | 177 |
hematopoietic oligopotent progenitor cell | 1.15e-13 | 161 |
hematopoietic multipotent progenitor cell | 1.15e-13 | 161 |
mature alpha-beta T cell | 5.69e-11 | 18 |
alpha-beta T cell | 5.69e-11 | 18 |
immature T cell | 5.69e-11 | 18 |
mature T cell | 5.69e-11 | 18 |
immature alpha-beta T cell | 5.69e-11 | 18 |
hematopoietic lineage restricted progenitor cell | 1.84e-10 | 120 |
nongranular leukocyte | 2.96e-10 | 115 |
T cell | 1.09e-09 | 25 |
pro-T cell | 1.09e-09 | 25 |
CD8-positive, alpha-beta T cell | 3.05e-08 | 11 |
lymphocyte of B lineage | 3.10e-07 | 24 |
pro-B cell | 3.10e-07 | 24 |
B cell | 4.28e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
adult organism | 7.13e-11 | 114 |