FFCP PHASE1:Hg19::chr11:63273696..63273707,+: Difference between revisions
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|id=chr11:63273696..63273707,+
|short_description=p4@LGALS12
|description=CAGE_peak_4_at_LGALS12_5end
|association_with_transcript=122bp_to_ENST00000394618_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=85329 | |EntrezGene=85329 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15788 | |HGNC=15788 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=122bp_to_ENST00000394618_5end | |||
|cluster_id=chr11:63273696..63273707,+ | |||
|coexpression_cluster_id=C29 | |||
|description=CAGE_peak_4_at_LGALS12_5end | |||
|id=chr11:63273696..63273707,+ | |||
|ontology_enrichment_celltype=CL:0000763!4.42e-29!112;CL:0000049!4.42e-29!112;CL:0000136!7.21e-19!15;CL:0000766!8.39e-18!76;CL:0000037!1.15e-17!172;CL:0000566!1.15e-17!172;CL:0002057!1.32e-17!42;CL:0002032!3.42e-16!165;CL:0000837!3.42e-16!165;CL:0000860!5.34e-16!45;CL:0000988!6.58e-16!182;CL:0000839!8.47e-13!70;CL:0002194!1.61e-11!63;CL:0000576!1.61e-11!63;CL:0000040!1.61e-11!63;CL:0000559!1.61e-11!63;CL:0000557!1.79e-11!71;CL:0002009!5.67e-11!65;CL:0000094!2.66e-09!8;CL:0000134!1.12e-08!358;CL:0000738!2.43e-08!140;CL:0002320!3.35e-08!365;CL:0000775!1.42e-07!3;CL:0002521!2.02e-07!3;CL:0002615!3.19e-07!3;CL:0000219!5.09e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000136;5.79e-37;13!CL:0000094;9.54e-19;8!CL:0000775;1.03e-18;3!CL:0000081;1.40e-13;11!CL:0002521;2.62e-09;3!CL:0002615;7.72e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,9.77e-32,15;CL:0000775,9.11e-19,3;CL:0000094,9.38e-19,8;CL:0000081,1.38e-13,11;CL:0002521,2.62e-09,3;CL:0002615,1.02e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0005425;5.18e-07;1!UBERON:0004874;5.18e-07;1 | |||
|ontology_enrichment_disease=DOID:8692!4.68e-16!31;DOID:1240!9.62e-12!39;DOID:2531!6.84e-08!51;DOID:0060083!6.84e-08!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.51e-10;31!DOID:1240;1.64e-07;39!DOID:225;2.16e-07;1!DOID:9119;2.93e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,5.80e-11,31;DOID:1240,1.78e-08,39;DOID:225,2.23e-07,1;DOID:9119,3.41e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!5.91e-17!102;UBERON:0003061!5.91e-17!102;UBERON:0002193!1.63e-14!112;UBERON:0000178!1.18e-11!15;UBERON:0000179!1.18e-11!15;UBERON:0000463!1.18e-11!15;UBERON:0002371!1.96e-09!80;UBERON:0001474!4.24e-09!86;UBERON:0002384!1.39e-08!375;UBERON:0002190!2.02e-07!3;UBERON:0002405!6.10e-07!115;UBERON:0004765!8.59e-07!101;UBERON:0001434!8.59e-07!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.96e-09;15!UBERON:0000179;1.96e-09;15!UBERON:0000463;1.96e-09;15!UBERON:0002190;2.62e-09;3!UBERON:0000989;5.18e-07;1!UBERON:0002146;5.18e-07;1!UBERON:0000941;5.18e-07;1!UBERON:0001785;5.18e-07;1!UBERON:0002464;5.18e-07;1!UBERON:0004904;5.18e-07;1!UBERON:0008811;5.18e-07;1!UBERON:0001021;5.18e-07;1!UBERON:0005623;5.18e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.13e-09,15;UBERON:0000179,2.13e-09,15;UBERON:0000463,2.13e-09,15;UBERON:0002190,2.62e-09,3;UBERON:0000989,4.89e-07,1;UBERON:0008811,4.89e-07,1;UBERON:0006258,4.89e-07,1;UBERON:0005876,4.89e-07,1;UBERON:0004874,4.89e-07,1;UBERON:0000941,5.50e-07,1;UBERON:0001785,5.50e-07,1;UBERON:0002464,5.50e-07,1;UBERON:0004904,5.50e-07,1;UBERON:0001021,5.50e-07,1;UBERON:0003902,5.50e-07,1;UBERON:0005425,5.50e-07,1;UBERON:0002146,6.57e-07,1;UBERON:0005623,6.57e-07,1 | |||
|phase1_expression=0.181678379270557,3.63970890614671,0.986680828671798,1.0007329835313,4.46961094427288,0,22.796989035148,0.631719873426831,6.00726944859629,0,0,0,0,0,0,0,0,0,0,0,0,0.940364164434263,0,0,0,0,0,0,2.36018566109342,0,0.154816123316076,0,0,0,0,0,0,0,0,0.434021741431704,0,0,0,0.581592955118259,0.377875943688809,0,0.697287110717054,0,0.309706370895104,0.28769239232215,0.512321413058201,0.945928919554341,0.344745680736619,0.645484683583826,0,0,0.545812300115692,0.224723484445085,0,0.320929027076094,0,0.329851300186716,0.398927315243264,0.426224750532694,0.870627715885752,0,0,0.251248665256743,0.521482918420201,0.434377689410233,0,0,0,0,0,0.209658645508376,0.336985893439485,0,0.64290234678832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64342657158052,1.68152568894461,0.263384084775077,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.75560528296651,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264145302039678,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.99602809578873,8.97484377612075,2.48649308061621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.647142602455851,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0.308097234229289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,3.0585488285695,0,1.42939065274673,0.411362273086194,1.29694662238543,1.62009431171434,0.79312517629427,0,0,0,0,0,0,0,4.59032554295478,1.1490322207942,0,0.973865820823666,0,0.456469358066384,2.82023812391442,0,0,0.1605880751037,0.201799707191048,0.425846237690326,4.80907482658071,0,0.223676107892416,0.333698283423817,1.9538809540204,0.556812347790485,0,0,2.33150377598474,0,0,3.95572084034114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53471711068062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,1.56980256395025,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,1.14580212005842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0.339936274560377,0,0,0,0,0,0,0,0,0,0,0,0,0,25.5688367583653,11.5317351250442,20.5251536431519,27.8691736103334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.62751880960079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,1.48863353516788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0.307988420568741,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0.193373663920732,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0.26721740526556,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0.217716747896961,0,0,0.0717222053926763,0,0,0,0,0,0,0.244482888365733,0,0,0.805095174364105,0 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|phase1_expression=0.181678379270557,3.63970890614671,0.986680828671798,1.0007329835313,4.46961094427288,0,22.796989035148,0.631719873426831,6.00726944859629,0,0,0,0,0,0,0,0,0,0,0,0,0.940364164434263,0,0,0,0,0,0,2.36018566109342,0,0.154816123316076,0,0,0,0,0,0,0,0,0.434021741431704,0,0,0,0.581592955118259,0.377875943688809,0,0.697287110717054,0,0.309706370895104,0.28769239232215,0.512321413058201,0.945928919554341,0.344745680736619,0.645484683583826,0,0,0.545812300115692,0.224723484445085,0,0.320929027076094,0,0.329851300186716,0.398927315243264,0.426224750532694,0.870627715885752,0,0,0.251248665256743,0.521482918420201,0.434377689410233,0,0,0,0,0,0.209658645508376,0.336985893439485,0,0.64290234678832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64342657158052,1.68152568894461,0.263384084775077,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.75560528296651,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264145302039678,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.99602809578873,8.97484377612075,2.48649308061621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.647142602455851,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0.308097234229289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,3.0585488285695,0,1.42939065274673,0.411362273086194,1.29694662238543,1.62009431171434,0.79312517629427,0,0,0,0,0,0,0,4.59032554295478,1.1490322207942,0,0.973865820823666,0,0.456469358066384,2.82023812391442,0,0,0.1605880751037,0.201799707191048,0.425846237690326,4.80907482658071,0,0.223676107892416,0.333698283423817,1.9538809540204,0.556812347790485,0,0,2.33150377598474,0,0,3.95572084034114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53471711068062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,1.56980256395025,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,1.14580212005842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0.339936274560377,0,0,0,0,0,0,0,0,0,0,0,0,0,25.5688367583653,11.5317351250442,20.5251536431519,27.8691736103334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.62751880960079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,1.48863353516788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0.307988420568741,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0.193373663920732,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0.26721740526556,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0.217716747896961,0,0,0.0717222053926763,0,0,0,0,0,0,0.244482888365733,0,0,0.805095174364105,0 | ||
|short_description=p4@LGALS12 | |||
}} | }} |
Latest revision as of 23:03, 18 September 2015
Short description: | p4@LGALS12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LGALS12_5end |
Coexpression cluster: | C29_mature_adipose_Adipocyte_breast_Lymphatic_vein_heart |
Association with transcript: | 122bp_to_ENST00000394618_5end |
EntrezGene: | LGALS12 |
HGNC: | 15788 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 9.77e-32 | 15 |
neutrophil | 9.11e-19 | 3 |
granulocyte | 9.38e-19 | 8 |
blood cell | 1.38e-13 | 11 |
subcutaneous fat cell | 2.62e-09 | 3 |
adipocyte of omentum tissue | 1.02e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 2.13e-09 | 15 |
haemolymphatic fluid | 2.13e-09 | 15 |
organism substance | 2.13e-09 | 15 |
subcutaneous adipose tissue | 2.62e-09 | 3 |
penis | 4.89e-07 | 1 |
intromittent organ | 4.89e-07 | 1 |
lateral plate mesenchyme | 4.89e-07 | 1 |
undifferentiated genital tubercle | 4.89e-07 | 1 |
somatopleure | 4.89e-07 | 1 |
cranial nerve II | 5.50e-07 | 1 |
cranial nerve | 5.50e-07 | 1 |
nerve trunk | 5.50e-07 | 1 |
nerve connecting eye with brain | 5.50e-07 | 1 |
nerve | 5.50e-07 | 1 |
retinal neural layer | 5.50e-07 | 1 |
presumptive neural retina | 5.50e-07 | 1 |
pulmonary valve | 6.57e-07 | 1 |
semi-lunar valve | 6.57e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 5.80e-11 | 31 |
leukemia | 1.78e-08 | 39 |
syndrome | 2.23e-07 | 1 |
acute myeloid leukemia | 3.41e-07 | 1 |