FFCP PHASE1:Hg19::chr1:33338030..33338037,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=252995 | |EntrezGene=252995 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20240 | |HGNC=20240 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=43bp_to_ENST00000496770_5end | |association_with_transcript=43bp_to_ENST00000496770_5end | ||
|cluster_id=chr1:33338030..33338037,- | |||
|coexpression_cluster_id=C171 | |||
|description=CAGE_peak_9_at_FNDC5_5end | |description=CAGE_peak_9_at_FNDC5_5end | ||
|id=chr1:33338030..33338037,- | |id=chr1:33338030..33338037,- | ||
|ontology_enrichment_celltype=CL:0000188!3.50e-25!9;CL:0000242!6.44e-20!2;CL:0000594!7.86e-13!3;CL:0000312!1.63e-08!5;CL:0000035!1.52e-07!20;CL:0000240!3.14e-07!6;CL:0000311!3.14e-07!6;CL:0000079!3.14e-07!6;CL:0000237!3.14e-07!6;CL:0000036!3.14e-07!6;CL:0000357!3.14e-07!6;CL:0000114!3.14e-07!6 | |ontology_enrichment_celltype=CL:0000188!3.50e-25!9;CL:0000242!6.44e-20!2;CL:0000594!7.86e-13!3;CL:0000312!1.63e-08!5;CL:0000035!1.52e-07!20;CL:0000240!3.14e-07!6;CL:0000311!3.14e-07!6;CL:0000079!3.14e-07!6;CL:0000237!3.14e-07!6;CL:0000036!3.14e-07!6;CL:0000357!3.14e-07!6;CL:0000114!3.14e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000123;3.61e-34;2!CL:0000242;3.61e-34;2!CL:0000188;3.59e-30;9!CL:0000312;1.40e-14;5!CL:0000240;2.19e-12;6!CL:0000311;2.19e-12;6!CL:0000079;2.19e-12;6!CL:0000237;2.19e-12;6!CL:0000362;1.04e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,3.61e-34,2;CL:0000188,3.59e-30,9;CL:0000312,1.40e-14,5;CL:0000240,2.19e-12,6;CL:0000311,2.19e-12,6;CL:0000079,2.19e-12,6;CL:0000237,2.19e-12,6;CL:0000036,2.19e-12,6;CL:0000357,2.19e-12,6;CL:0000114,2.19e-12,6;CL:0000362,1.04e-08,9 | |||
|ontology_enrichment_development_v019=CL:0000357;2.19e-12;6!CL:0000114;2.19e-12;6 | |||
|ontology_enrichment_disease=DOID:169!4.80e-07!6 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002581!4.75e-10!1;UBERON:0000013!2.73e-08!5;UBERON:0002410!2.73e-08!5;UBERON:0001872!3.92e-08!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;1.51e-17;16!UBERON:0002036;1.51e-17;16!UBERON:0002385;2.91e-09;31!UBERON:0001015;2.91e-09;31!UBERON:0000383;2.91e-09;31 | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p9@FNDC5 | |short_description=p9@FNDC5 | ||
}} | }} |
Latest revision as of 16:05, 17 September 2015
Short description: | p9@FNDC5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_FNDC5_5end |
Coexpression cluster: | C171_merkel_neuroblastoma_pineal_retinoblastoma_carcinoid_small_eye |
Association with transcript: | 43bp_to_ENST00000496770_5end |
EntrezGene: | FNDC5 |
HGNC: | 20240 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 3.61e-34 | 2 |
cell of skeletal muscle | 3.59e-30 | 9 |
keratinocyte | 1.40e-14 | 5 |
stratified squamous epithelial cell | 2.19e-12 | 6 |
keratin accumulating cell | 2.19e-12 | 6 |
stratified epithelial cell | 2.19e-12 | 6 |
keratinizing barrier epithelial cell | 2.19e-12 | 6 |
epithelial fate stem cell | 2.19e-12 | 6 |
stratified epithelial stem cell | 2.19e-12 | 6 |
surface ectodermal cell | 2.19e-12 | 6 |
epidermal cell | 1.04e-08 | 9 |