FFCP PHASE1:Hg19::chr11:62649322..62649383,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:62649322..62649383,+
|short_description=p7@SLC3A2
|description=CAGE_peak_7_at_SLC3A2_5end
|association_with_transcript=45bp_to_ENST00000457660_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6520 | |EntrezGene=6520 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11026 | |HGNC=11026 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=45bp_to_ENST00000457660_5end | |||
|cluster_id=chr11:62649322..62649383,+ | |||
|coexpression_cluster_id=C19 | |||
|description=CAGE_peak_7_at_SLC3A2_5end | |||
|id=chr11:62649322..62649383,+ | |||
|ontology_enrichment_celltype=CL:0000548!1.64e-15!679;CL:0000004!1.64e-15!679;CL:0000255!1.64e-15!679;CL:0000012!1.78e-15!682;CL:0002057!3.80e-14!42;CL:0000860!3.98e-14!45;CL:0000063!3.82e-11!578;CL:0000003!1.92e-10!722;CL:0002009!1.55e-09!65;CL:0002194!2.40e-09!63;CL:0000576!2.40e-09!63;CL:0000040!2.40e-09!63;CL:0000559!2.40e-09!63;CL:0000066!2.44e-09!254;CL:0000839!3.70e-09!70;CL:0000557!2.24e-08!71;CL:0000144!5.86e-08!625;CL:0000766!3.40e-07!76;CL:0002076!5.03e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.20e-25;33!CL:0002057;7.20e-25;33!CL:0000473;9.02e-18;39!CL:0000234;9.02e-18;39!CL:0000576;1.03e-09;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.11e-18,42;CL:0002057,2.11e-18,42;CL:0000473,1.29e-16,48;CL:0000234,1.29e-16,48;CL:0000839,1.47e-11,66;CL:0002194,1.77e-11,59;CL:0000576,1.77e-11,59;CL:0000040,1.77e-11,59;CL:0000559,1.77e-11,59;CL:0002009,1.01e-10,61;CL:0000557,8.03e-10,67;CL:0000766,1.57e-09,72;CL:0002076,1.20e-07,42;CL:0000066,6.72e-07,253 | |||
|ontology_enrichment_development_v019=CL:0002057;4.64e-14;42 | |||
|ontology_enrichment_disease=DOID:0050687!1.94e-08!143;DOID:305!5.73e-08!106;DOID:14566!7.84e-08!239;DOID:162!4.46e-07!235 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.16e-07,106 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.46e-08,76;UBERON:0001474,1.39e-07,82 | |||
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| ||
|short_description=p7@SLC3A2 | |||
}} | }} |
Latest revision as of 22:08, 18 September 2015
Short description: | p7@SLC3A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_SLC3A2_5end |
Coexpression cluster: | C19_embryonic_testis_cord_chronic_CD14_NK_mesothelioma |
Association with transcript: | 45bp_to_ENST00000457660_5end |
EntrezGene: | SLC3A2 |
HGNC: | 11026 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.11e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.11e-18 | 42 |
defensive cell | 1.29e-16 | 48 |
phagocyte | 1.29e-16 | 48 |
myeloid lineage restricted progenitor cell | 1.47e-11 | 66 |
monopoietic cell | 1.77e-11 | 59 |
monocyte | 1.77e-11 | 59 |
monoblast | 1.77e-11 | 59 |
promonocyte | 1.77e-11 | 59 |
macrophage dendritic cell progenitor | 1.01e-10 | 61 |
granulocyte monocyte progenitor cell | 8.03e-10 | 67 |
myeloid leukocyte | 1.57e-09 | 72 |
endo-epithelial cell | 1.20e-07 | 42 |
epithelial cell | 6.72e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.46e-08 | 76 |
bone element | 1.39e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.16e-07 | 106 |