FFCP PHASE1:Hg19::chr1:33219592..33219626,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57648 | |EntrezGene=57648 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29301 | |HGNC=29301 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000373481,ENST00000468130_5end | |association_with_transcript=0bp_to_ENST00000373481,ENST00000468130_5end | ||
|cluster_id=chr1:33219592..33219626,+ | |||
|coexpression_cluster_id=C3971 | |||
|description=CAGE_peak_1_at_KIAA1522_5end | |description=CAGE_peak_1_at_KIAA1522_5end | ||
|id=chr1:33219592..33219626,+ | |id=chr1:33219592..33219626,+ | ||
|ontology_enrichment_celltype=CL:0000066!5.29e-20!254;CL:0002076!1.22e-10!43;CL:0000076!3.33e-07!62;CL:0002368!6.50e-07!13 | |ontology_enrichment_celltype=CL:0000066!5.29e-20!254;CL:0002076!1.22e-10!43;CL:0000076!3.33e-07!62;CL:0002368!6.50e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0002076;5.50e-09;42!CL:0002368;2.53e-07;13!CL:0000077;6.85e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.14e-22,253;CL:0002076,2.58e-12,42;CL:0000223,1.94e-08,58;CL:0002368,2.30e-07,13;CL:0000076,4.15e-07,63;CL:0000077,8.42e-07,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!6.65e-10!143;DOID:305!2.65e-09!106;DOID:299!3.24e-08!25;DOID:1749!1.42e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:299;3.83e-09;25!DOID:1749;4.49e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,6.17e-11,106;DOID:0050687,6.88e-11,143;DOID:299,3.68e-09,25;DOID:1749,4.44e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0004121!3.99e-17!169;UBERON:0000924!4.21e-17!173;UBERON:0006601!4.21e-17!173;UBERON:0000153!4.42e-14!129;UBERON:0007811!4.42e-14!129;UBERON:0000033!6.65e-14!123;UBERON:0000464!3.29e-13!104;UBERON:0003075!3.99e-12!86;UBERON:0007284!3.99e-12!86;UBERON:0005743!4.17e-12!86;UBERON:0003056!5.59e-12!61;UBERON:0002346!5.61e-12!90;UBERON:0001017!1.97e-11!82;UBERON:0000475!1.00e-10!365;UBERON:0000073!1.10e-10!94;UBERON:0001016!1.10e-10!94;UBERON:0001049!3.22e-10!57;UBERON:0005068!3.22e-10!57;UBERON:0006241!3.22e-10!57;UBERON:0007135!3.22e-10!57;UBERON:0000064!4.22e-10!219;UBERON:0001869!7.20e-10!32;UBERON:0000955!7.48e-10!69;UBERON:0006238!7.48e-10!69;UBERON:0000466!7.63e-10!126;UBERON:0003080!1.29e-09!42;UBERON:0002616!1.32e-09!59;UBERON:0002780!1.88e-09!41;UBERON:0001890!1.88e-09!41;UBERON:0006240!1.88e-09!41;UBERON:0000062!1.98e-09!511;UBERON:0001893!2.07e-09!34;UBERON:0007023!2.12e-09!115;UBERON:0002020!2.52e-09!34;UBERON:0003528!2.52e-09!34;UBERON:0002791!3.86e-09!33;UBERON:0002619!4.43e-09!22;UBERON:0002553!8.90e-09!70;UBERON:0000956!9.38e-09!25;UBERON:0000203!9.38e-09!25;UBERON:0000481!9.46e-09!347;UBERON:0004119!1.56e-08!169;UBERON:0000925!1.56e-08!169;UBERON:0006595!1.56e-08!169;UBERON:0001950!1.57e-08!20;UBERON:0005156!5.60e-08!59;UBERON:0000990!5.60e-08!59;UBERON:0003133!9.43e-08!48;UBERON:0000922!8.63e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.02e-09;22!UBERON:0001869;1.21e-09;32!UBERON:0000956;2.30e-09;25!UBERON:0000203;2.30e-09;25!UBERON:0001950;4.09e-09;20!UBERON:0001893;6.54e-09;34!UBERON:0003528;8.22e-09;34!UBERON:0002020;8.22e-09;34!UBERON:0002791;8.65e-09;32!UBERON:0002780;1.93e-07;41!UBERON:0001890;1.93e-07;41!UBERON:0001041;6.65e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.79e-15,171;UBERON:0000924,2.79e-15,171;UBERON:0006601,2.79e-15,171;UBERON:0010371,3.73e-12,104;UBERON:0001017,5.00e-12,81;UBERON:0011216,1.01e-11,223;UBERON:0003056,2.28e-11,61;UBERON:0001049,1.38e-10,56;UBERON:0005068,1.38e-10,56;UBERON:0006241,1.38e-10,56;UBERON:0007135,1.38e-10,56;UBERON:0001869,1.45e-10,32;UBERON:0000073,1.66e-10,53;UBERON:0002616,1.66e-10,53;UBERON:0003075,2.18e-10,82;UBERON:0007284,2.18e-10,82;UBERON:0000955,2.54e-10,68;UBERON:0006238,2.54e-10,68;UBERON:0001016,3.79e-10,89;UBERON:0002346,4.19e-10,86;UBERON:0002780,6.44e-10,41;UBERON:0001890,6.44e-10,41;UBERON:0003080,6.44e-10,41;UBERON:0006240,6.44e-10,41;UBERON:0001893,7.45e-10,34;UBERON:0003528,9.18e-10,34;UBERON:0002020,9.18e-10,34;UBERON:0002619,1.04e-09,22;UBERON:0002791,1.51e-09,32;UBERON:0007023,1.66e-09,114;UBERON:0000956,2.34e-09,25;UBERON:0000203,2.34e-09,25;UBERON:0001950,4.09e-09,20;UBERON:0003133,3.99e-08,48;UBERON:0001008,5.34e-08,48;UBERON:0005156,6.23e-08,59;UBERON:0000990,6.23e-08,59;UBERON:0004119,1.05e-07,160;UBERON:0000925,1.05e-07,160;UBERON:0006595,1.05e-07,160;UBERON:0006554,1.27e-07,47;UBERON:0002553,2.39e-07,61;UBERON:0005177,3.46e-07,101 | |||
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| ||
|short_description=p1@KIAA1522 | |short_description=p1@KIAA1522 | ||
}} | }} |
Latest revision as of 15:48, 17 September 2015
Short description: | p1@KIAA1522 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KIAA1522_5end |
Coexpression cluster: | C3971_Mast_breast_lung_Wilms_salivary_mesothelioma_oral |
Association with transcript: | 0bp_to_ENST00000373481, ENST00000468130_5end |
EntrezGene: | KIAA1522 |
HGNC: | 29301 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.14e-22 | 253 |
endo-epithelial cell | 2.58e-12 | 42 |
endodermal cell | 1.94e-08 | 58 |
respiratory epithelial cell | 2.30e-07 | 13 |
squamous epithelial cell | 4.15e-07 | 63 |
mesothelial cell | 8.42e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 6.17e-11 | 106 |
cell type cancer | 6.88e-11 | 143 |
adenocarcinoma | 3.68e-09 | 25 |
squamous cell carcinoma | 4.44e-08 | 14 |