FFCP PHASE1:Hg19::chr1:32257811..32257816,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=473bp_to_BC098449_5end | |association_with_transcript=473bp_to_BC098449_5end | ||
|cluster_id=chr1:32257811..32257816,- | |||
|description=CAGE_peak_1_at_BC098449_5end | |description=CAGE_peak_1_at_BC098449_5end | ||
|id=chr1:32257811..32257816,- | |id=chr1:32257811..32257816,- | ||
|ontology_enrichment_celltype=CL:0000055!3.95e-27!180;CL:0000183!1.89e-19!59;CL:0000680!5.21e-19!57;CL:0000056!5.21e-19!57;CL:0000355!5.21e-19!57;CL:0000187!2.46e-18!54;CL:0000222!5.11e-17!119;CL:0000393!2.21e-16!60;CL:0000211!2.21e-16!60;CL:0000192!2.64e-15!42;CL:0000514!2.64e-15!42;CL:0002371!7.24e-15!591;CL:0000144!1.78e-13!625;CL:0000359!9.46e-13!32;CL:0000057!8.32e-12!75;CL:0000548!9.27e-12!679;CL:0000004!9.27e-12!679;CL:0000255!9.27e-12!679;CL:0000012!1.64e-11!682;CL:0000220!2.09e-10!246;CL:0002321!3.69e-10!248;CL:0002620!5.15e-10!23;CL:0000071!1.23e-09!18;CL:0002546!1.23e-09!18;CL:0002139!1.69e-09!24;CL:0000003!2.11e-08!722;CL:0000115!7.12e-07!35;CL:0000048!8.25e-07!430 | |ontology_enrichment_celltype=CL:0000055!3.95e-27!180;CL:0000183!1.89e-19!59;CL:0000680!5.21e-19!57;CL:0000056!5.21e-19!57;CL:0000355!5.21e-19!57;CL:0000187!2.46e-18!54;CL:0000222!5.11e-17!119;CL:0000393!2.21e-16!60;CL:0000211!2.21e-16!60;CL:0000192!2.64e-15!42;CL:0000514!2.64e-15!42;CL:0002371!7.24e-15!591;CL:0000144!1.78e-13!625;CL:0000359!9.46e-13!32;CL:0000057!8.32e-12!75;CL:0000548!9.27e-12!679;CL:0000004!9.27e-12!679;CL:0000255!9.27e-12!679;CL:0000012!1.64e-11!682;CL:0000220!2.09e-10!246;CL:0002321!3.69e-10!248;CL:0002620!5.15e-10!23;CL:0000071!1.23e-09!18;CL:0002546!1.23e-09!18;CL:0002139!1.69e-09!24;CL:0000003!2.11e-08!722;CL:0000115!7.12e-07!35;CL:0000048!8.25e-07!430 | ||
|ontology_enrichment_celltype_v019=CL:0000359;8.55e-24;32!CL:0000192;2.63e-17;43!CL:0002539;1.42e-15;10!CL:0002596;8.04e-14;2!CL:0000187;1.52e-11;55!CL:0002595;1.66e-11;5!CL:0000393;1.43e-09;61!CL:0000211;1.43e-09;61!CL:0002601;1.00e-07;1!CL:0000511;2.74e-07;1!CL:0002625;2.74e-07;1!CL:0000216;2.74e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.40e-25,32;CL:0000192,8.09e-22,43;CL:0000514,8.09e-22,43;CL:0000187,3.37e-19,55;CL:0000680,4.66e-18,58;CL:0000056,4.66e-18,58;CL:0000355,4.66e-18,58;CL:0000393,4.98e-17,61;CL:0000211,4.98e-17,61;CL:0002539,1.36e-15,10;CL:0002596,8.06e-14,2;CL:0000222,7.39e-13,121;CL:0002595,1.39e-11,5;CL:0002601,9.71e-08,1;CL:0000511,2.07e-07,1;CL:0002625,2.07e-07,1;CL:0000216,2.07e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000514;2.63e-17;43!CL:0000355;1.75e-11;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!1.38e-25!79;UBERON:0007798!1.38e-25!79;UBERON:0000055!2.72e-22!69;UBERON:0001981!1.06e-20!60;UBERON:0007500!1.06e-20!60;UBERON:0004537!1.06e-20!60;UBERON:0006965!1.06e-20!60;UBERON:0000490!9.80e-19!138;UBERON:0001637!2.11e-18!42;UBERON:0003509!2.11e-18!42;UBERON:0004572!2.11e-18!42;UBERON:0000914!5.74e-18!83;UBERON:0002329!5.74e-18!83;UBERON:0003077!5.74e-18!83;UBERON:0003059!5.74e-18!83;UBERON:0007282!5.74e-18!83;UBERON:0009618!5.74e-18!83;UBERON:0007285!5.74e-18!83;UBERON:0004535!1.67e-17!110;UBERON:0001134!5.46e-17!61;UBERON:0002036!5.46e-17!61;UBERON:0003082!5.46e-17!61;UBERON:0004290!8.86e-17!70;UBERON:0001009!1.32e-16!113;UBERON:0004872!4.07e-16!84;UBERON:0002385!4.41e-16!63;UBERON:0001015!4.41e-16!63;UBERON:0000383!4.41e-16!63;UBERON:0000486!3.50e-15!82;UBERON:0004573!9.92e-14!33;UBERON:0004571!9.92e-14!33;UBERON:0005256!7.29e-13!143;UBERON:0003914!9.26e-13!118;UBERON:0000487!2.59e-11!22;UBERON:0000119!5.78e-10!312;UBERON:0001986!1.23e-09!18;UBERON:0004638!1.23e-09!18;UBERON:0004852!1.23e-09!18;UBERON:0006914!2.19e-09!25;UBERON:0000483!2.51e-09!309;UBERON:0000475!1.10e-07!365;UBERON:0002100!2.00e-07!216;UBERON:0000477!2.68e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.69e-17;33!UBERON:0004571;1.69e-17;33!UBERON:0004237;1.42e-15;10!UBERON:0004695;1.42e-15;10!UBERON:0002111;1.42e-15;10!UBERON:0004178;1.42e-15;10!UBERON:0005396;8.04e-14;2!UBERON:0007500;9.12e-13;56!UBERON:0001981;9.12e-13;56!UBERON:0004537;9.12e-13;56!UBERON:0000055;4.23e-12;65!UBERON:0001637;1.43e-11;42!UBERON:0003509;1.43e-11;42!UBERON:0004572;1.43e-11;42!UBERON:0003834;1.66e-11;5!UBERON:0001533;1.66e-11;5!UBERON:0001135;2.63e-10;15!UBERON:0003513;2.36e-08;7!UBERON:0002049;2.95e-08;75!UBERON:0007798;2.95e-08;75!UBERON:0001136;2.74e-07;1!UBERON:0001343;2.74e-07;1!UBERON:0004910;2.74e-07;1!UBERON:0004813;2.74e-07;1!UBERON:0000947;2.75e-07;21!UBERON:0010191;2.75e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004573,9.73e-21,33;UBERON:0004571,9.73e-21,33;UBERON:0007500,1.11e-20,59;UBERON:0001981,1.11e-20,59;UBERON:0004537,1.11e-20,59;UBERON:0006965,1.11e-20,59;UBERON:0000055,4.36e-20,68;UBERON:0001637,6.21e-19,42;UBERON:0003509,6.21e-19,42;UBERON:0004572,6.21e-19,42;UBERON:0002329,6.58e-19,71;UBERON:0003059,6.58e-19,71;UBERON:0007282,6.58e-19,71;UBERON:0004290,6.58e-19,71;UBERON:0009618,6.58e-19,71;UBERON:0003077,1.34e-18,72;UBERON:0007285,1.34e-18,72;UBERON:0007524,2.68e-18,73;UBERON:0004872,3.66e-18,83;UBERON:0002049,4.40e-17,78;UBERON:0007798,4.40e-17,78;UBERON:0007503,6.51e-17,78;UBERON:0001134,1.04e-16,62;UBERON:0002036,1.04e-16,62;UBERON:0003082,1.04e-16,62;UBERON:0002385,4.25e-16,64;UBERON:0001015,4.25e-16,64;UBERON:0000383,4.25e-16,64;UBERON:0000486,1.08e-15,83;UBERON:0004237,1.36e-15,10;UBERON:0004695,1.36e-15,10;UBERON:0002111,1.36e-15,10;UBERON:0004178,1.36e-15,10;UBERON:0000490,4.79e-14,148;UBERON:0005396,8.06e-14,2;UBERON:0004535,5.62e-13,109;UBERON:0001009,1.56e-12,112;UBERON:0003834,1.39e-11,5;UBERON:0001533,1.39e-11,5;UBERON:0005256,4.78e-11,122;UBERON:0003914,2.39e-10,117;UBERON:0001135,2.55e-10,15;UBERON:0003513,2.08e-08,7;UBERON:0003104,1.32e-07,160;UBERON:0009142,1.32e-07,160;UBERON:0001136,2.07e-07,1;UBERON:0001343,2.07e-07,1;UBERON:0004910,2.07e-07,1;UBERON:0005154,2.07e-07,1;UBERON:0005295,2.07e-07,1;UBERON:0004813,2.07e-07,1;UBERON:0005297,2.07e-07,1;UBERON:0005294,2.07e-07,1;UBERON:0010141,2.07e-07,1;UBERON:0005891,2.07e-07,1;UBERON:0000947,2.70e-07,21;UBERON:0010191,2.70e-07,21 | |||
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| ||
|short_description=p1@BC098449 | |short_description=p1@BC098449 | ||
}} | }} |
Latest revision as of 07:14, 28 July 2015
Short description: | p1@BC098449 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BC098449_5end |
Coexpression cluster: | NA |
Association with transcript: | 473bp_to_BC098449_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.40e-25 | 32 |
smooth muscle cell | 8.09e-22 | 43 |
smooth muscle myoblast | 8.09e-22 | 43 |
muscle cell | 3.37e-19 | 55 |
muscle precursor cell | 4.66e-18 | 58 |
myoblast | 4.66e-18 | 58 |
multi-potent skeletal muscle stem cell | 4.66e-18 | 58 |
electrically responsive cell | 4.98e-17 | 61 |
electrically active cell | 4.98e-17 | 61 |
aortic smooth muscle cell | 1.36e-15 | 10 |
smooth muscle cell of the carotid artery | 8.06e-14 | 2 |
mesodermal cell | 7.39e-13 | 121 |
smooth muscle cell of the subclavian artery | 1.39e-11 | 5 |
uterine smooth muscle cell | 9.71e-08 | 1 |
androgen binding protein secreting cell | 2.07e-07 | 1 |
seminiferous tubule epithelial cell | 2.07e-07 | 1 |
Sertoli cell | 2.07e-07 | 1 |