FFCP PHASE1:Hg19::chr16:15900134..15900136,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:15900134..15900136,- | |||
|coexpression_cluster_id=C48 | |||
|description=CAGE_peak_at_chr16:15900134..15900136,- | |description=CAGE_peak_at_chr16:15900134..15900136,- | ||
|id=chr16:15900134..15900136,- | |id=chr16:15900134..15900136,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0000358;2.46e-13;1!UBERON:0005754;2.46e-13;1!UBERON:0005425;4.23e-13;1!UBERON:0004874;7.68e-13;1!UBERON:0007297;2.66e-07;2!UBERON:0006965;3.48e-07;2!UBERON:0006603;5.86e-07;65 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.99e-18!115;UBERON:0006947!7.11e-10!3;UBERON:0004054!7.11e-10!3;UBERON:0003135!2.51e-09!11;UBERON:0005904!1.75e-07!4;UBERON:0005409!2.88e-07!35 | |ontology_enrichment_uberon=UBERON:0007023!3.99e-18!115;UBERON:0006947!7.11e-10!3;UBERON:0004054!7.11e-10!3;UBERON:0003135!2.51e-09!11;UBERON:0005904!1.75e-07!4;UBERON:0005409!2.88e-07!35 | ||
|ontology_enrichment_uberon_v019=UBERON:0003135;2.59e-17;11!UBERON:0006947;6.22e-17;3!UBERON:0004054;6.22e-17;3!UBERON:0006834;1.71e-13;1!UBERON:0001000;2.46e-13;1!UBERON:0000998;2.46e-13;1!UBERON:0006868;2.46e-13;1!UBERON:0005352;2.46e-13;1!UBERON:0003101;3.22e-13;22!UBERON:0000079;3.22e-13;22!UBERON:0000941;4.23e-13;1!UBERON:0001785;4.23e-13;1!UBERON:0002464;4.23e-13;1!UBERON:0004904;4.23e-13;1!UBERON:0001021;4.23e-13;1!UBERON:0005904;6.07e-13;4!UBERON:0005795;7.68e-13;1!UBERON:0000989;7.68e-13;1!UBERON:0008811;7.68e-13;1!UBERON:0004175;2.63e-09;21!UBERON:0003714;3.48e-07;2!UBERON:0005162;3.48e-07;2!UBERON:0000122;3.48e-07;2!UBERON:0000473;8.73e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003135,2.71e-17,11;UBERON:0006947,7.30e-17,3;UBERON:0004054,7.30e-17,3;UBERON:0006834,1.82e-13,1;UBERON:0001000,2.62e-13,1;UBERON:0005352,2.62e-13,1;UBERON:0000998,2.95e-13,1;UBERON:0006868,2.95e-13,1;UBERON:0003101,3.57e-13,22;UBERON:0000079,3.57e-13,22;UBERON:0000941,3.76e-13,1;UBERON:0001785,3.76e-13,1;UBERON:0002464,3.76e-13,1;UBERON:0004904,3.76e-13,1;UBERON:0001021,3.76e-13,1;UBERON:0003902,3.76e-13,1;UBERON:0005425,3.76e-13,1;UBERON:0000989,5.38e-13,1;UBERON:0008811,5.38e-13,1;UBERON:0006258,5.38e-13,1;UBERON:0005876,5.38e-13,1;UBERON:0004874,5.38e-13,1;UBERON:0005904,6.84e-13,4;UBERON:0007023,5.17e-11,114;UBERON:0005156,4.30e-09,59;UBERON:0000990,4.30e-09,59;UBERON:0003133,1.85e-08,48;UBERON:0004175,7.80e-08,25;UBERON:0003714,3.28e-07,2;UBERON:0005162,3.28e-07,2;UBERON:0000122,3.28e-07,2;UBERON:0000473,9.66e-07,8 | |||
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| ||
|short_description=p@chr16:15900134..15900136,- | |short_description=p@chr16:15900134..15900136,- | ||
}} | }} |
Latest revision as of 06:39, 25 July 2015
Short description: | p@chr16:15900134..15900136, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:15900134..15900136, - |
Coexpression cluster: | C48_smooth_bladder_esophagus_colon_penis_aorta_uterus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
male reproductive organ | 2.71e-17 | 11 |
male genital duct | 7.30e-17 | 3 |
internal male genitalia | 7.30e-17 | 3 |
uterus or analog | 1.82e-13 | 1 |
vas deferens | 2.62e-13 | 1 |
spermatic cord | 2.62e-13 | 1 |
seminal vesicle | 2.95e-13 | 1 |
seminal fluid secreting gland | 2.95e-13 | 1 |
male organism | 3.57e-13 | 22 |
male reproductive system | 3.57e-13 | 22 |
cranial nerve II | 3.76e-13 | 1 |
cranial nerve | 3.76e-13 | 1 |
nerve trunk | 3.76e-13 | 1 |
nerve connecting eye with brain | 3.76e-13 | 1 |
nerve | 3.76e-13 | 1 |
retinal neural layer | 3.76e-13 | 1 |
presumptive neural retina | 3.76e-13 | 1 |
penis | 5.38e-13 | 1 |
intromittent organ | 5.38e-13 | 1 |
lateral plate mesenchyme | 5.38e-13 | 1 |
undifferentiated genital tubercle | 5.38e-13 | 1 |
somatopleure | 5.38e-13 | 1 |
duct of male reproductive system | 6.84e-13 | 4 |
adult organism | 5.17e-11 | 114 |
reproductive structure | 4.30e-09 | 59 |
reproductive system | 4.30e-09 | 59 |
reproductive organ | 1.85e-08 | 48 |
internal genitalia | 7.80e-08 | 25 |
neural tissue | 3.28e-07 | 2 |
multi cell component structure | 3.28e-07 | 2 |
neuron projection bundle | 3.28e-07 | 2 |
testis | 9.66e-07 | 8 |