FFCP PHASE1:Hg19::chr11:62475140..62475195,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:62475140..62475195,+
|short_description=p1@GNG3
|description=CAGE_peak_1_at_GNG3_5end
|association_with_transcript=10bp_to_ENST00000294117_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2785 | |EntrezGene=2785 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4405 | |HGNC=4405 | ||
|TSSclassifier=strong | |||
|UniProt=P63215 | |UniProt=P63215 | ||
|association_with_transcript=10bp_to_ENST00000294117_5end | |||
|cluster_id=chr11:62475140..62475195,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_GNG3_5end | |||
|id=chr11:62475140..62475195,+ | |||
|ontology_enrichment_celltype=CL:0000047!9.73e-10!8;CL:0002319!1.79e-08!25;CL:0000540!1.50e-07!6;CL:0000031!1.50e-07!6;CL:0000404!1.50e-07!6;CL:0000133!3.82e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002319;2.07e-10;25!CL:0000540;2.68e-10;6!CL:0000404;2.68e-10;6!CL:0002322;7.49e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.78e-13,8;CL:0000133,5.94e-11,59;CL:0002319,2.06e-10,25;CL:0000540,2.70e-10,6;CL:0000031,2.70e-10,6;CL:0000404,2.70e-10,6;CL:0000221,7.15e-08,72;CL:0002322,7.85e-08,5 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.08e-17;82!CL:0000031;2.68e-10;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001869;1.27e-50;32!UBERON:0001893;2.15e-50;34!UBERON:0002791;3.56e-50;32!UBERON:0003528;3.77e-50;34!UBERON:0002020;3.77e-50;34!UBERON:0002780;4.47e-49;41!UBERON:0001890;4.47e-49;41!UBERON:0000073;1.81e-47;53!UBERON:0002616;1.81e-47;53!UBERON:0000956;4.29e-44;25!UBERON:0000203;4.29e-44;25!UBERON:0002619;3.43e-40;22!UBERON:0001950;6.54e-37;20!UBERON:0000955;4.90e-32;68!UBERON:0001017;8.99e-31;75!UBERON:0001016;8.88e-29;83!UBERON:0004732;1.81e-17;13!UBERON:0004733;3.30e-16;12!UBERON:0002028;3.30e-16;12!UBERON:0002420;9.99e-16;9!UBERON:0007245;9.99e-16;9!UBERON:0010009;9.99e-16;9!UBERON:0010011;9.99e-16;9!UBERON:0000454;9.99e-16;9!UBERON:0000125;2.16e-15;9!UBERON:0002308;2.16e-15;9!UBERON:0007023;2.50e-14;114!UBERON:0001871;5.90e-13;6!UBERON:0009663;2.28e-12;7!UBERON:0011216;3.07e-12;132!UBERON:0000200;5.62e-12;6!UBERON:0002680;8.65e-12;9!UBERON:0001895;8.65e-12;9!UBERON:0001894;1.49e-11;7!UBERON:0002298;7.05e-11;6!UBERON:0001872;4.35e-10;5!UBERON:0002021;4.39e-10;5!UBERON:0000349;5.32e-10;5!UBERON:0000369;3.13e-08;4!UBERON:0002435;3.13e-08;4!UBERON:0000204;3.13e-08;4!UBERON:0010314;1.51e-07;132!UBERON:0002037;3.37e-07;6!UBERON:0002784;3.85e-07;4!UBERON:0000922;6.51e-07;49!UBERON:0003296;6.52e-07;4!UBERON:0010133;6.52e-07;4!UBERON:0001870;7.81e-07;3 | |||
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| ||
|short_description=p1@GNG3 | |||
}} | }} |
Latest revision as of 20:55, 18 September 2015
Short description: | p1@GNG3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GNG3_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 10bp_to_ENST00000294117_5end |
EntrezGene: | GNG3 |
HGNC: | 4405 |
UniProt: | P63215 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.78e-13 | 8 |
neurectodermal cell | 5.94e-11 | 59 |
neural cell | 2.06e-10 | 25 |
neuron | 2.70e-10 | 6 |
neuroblast | 2.70e-10 | 6 |
electrically signaling cell | 2.70e-10 | 6 |
ectodermal cell | 7.15e-08 | 72 |
embryonic stem cell | 7.85e-08 | 5 |