FFCP PHASE1:Hg19::chr16:14605182..14605213,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:14605182..14605213,- | |||
|description=CAGE_peak_at_chr16:14605182..14605213,- | |description=CAGE_peak_at_chr16:14605182..14605213,- | ||
|id=chr16:14605182..14605213,- | |id=chr16:14605182..14605213,- | ||
|ontology_enrichment_celltype=CL:0002368!3.04e-09!13;CL:0000144!7.25e-09!625;CL:0000548!7.67e-08!679;CL:0000004!7.67e-08!679;CL:0000255!7.67e-08!679;CL:0000012!1.22e-07!682;CL:0002371!3.12e-07!591;CL:0000244!4.53e-07!4;CL:0000731!4.53e-07!4;CL:0002076!6.66e-07!43;CL:0002334!6.90e-07!12 | |ontology_enrichment_celltype=CL:0002368!3.04e-09!13;CL:0000144!7.25e-09!625;CL:0000548!7.67e-08!679;CL:0000004!7.67e-08!679;CL:0000255!7.67e-08!679;CL:0000012!1.22e-07!682;CL:0002371!3.12e-07!591;CL:0000244!4.53e-07!4;CL:0000731!4.53e-07!4;CL:0002076!6.66e-07!43;CL:0002334!6.90e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000244;2.47e-15;4!CL:0000731;2.47e-15;4!CL:0002159;3.26e-12;14!CL:0002166;5.49e-12;3!CL:0002621;2.86e-11;3!CL:0000317;1.49e-08;2!CL:1000448;1.49e-08;2!CL:0002308;1.49e-08;2!CL:0002140;1.49e-08;2!CL:0000306;3.40e-08;4!CL:0002222;3.40e-08;4!CL:0002224;3.40e-08;4!CL:0002368;8.21e-07;13!CL:0000362;8.71e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,3.13e-15,4;CL:0000731,3.13e-15,4;CL:0002159,2.82e-12,14;CL:0002166,4.03e-12,3;CL:0002621,1.71e-11,3;CL:0000317,1.50e-08,2;CL:1000448,1.50e-08,2;CL:0002308,1.50e-08,2;CL:0002140,1.50e-08,2;CL:0000306,4.07e-08,4;CL:0002222,4.07e-08,4;CL:0002224,4.07e-08,4;CL:0000066,4.08e-08,253;CL:0000362,8.72e-07,9;CL:0002368,8.87e-07,13;CL:0002076,9.90e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!6.49e-10!14;DOID:193!3.31e-08!29;DOID:120!7.26e-08!27 | |||
|ontology_enrichment_disease_v019=DOID:2394;4.92e-11;14!DOID:120;1.02e-08;27!DOID:193;5.21e-08;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,6.08e-11,14;DOID:120,1.14e-08,27;DOID:193,5.79e-08,29 | |||
|ontology_enrichment_uberon=UBERON:0007625!8.04e-08!11;UBERON:0000076!1.61e-07!8;UBERON:0002118!2.56e-07!5;UBERON:0004532!2.56e-07!5 | |ontology_enrichment_uberon=UBERON:0007625!8.04e-08!11;UBERON:0000076!1.61e-07!8;UBERON:0002118!2.56e-07!5;UBERON:0004532!2.56e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0000486;4.64e-14;12!UBERON:0010371;2.54e-13;31!UBERON:0000365;2.83e-12;5!UBERON:0001949;2.86e-11;3!UBERON:0002118;5.47e-11;5!UBERON:0005910;3.14e-10;6!UBERON:0001708;4.36e-09;4!UBERON:0008895;4.36e-09;4!UBERON:0002419;1.49e-08;2!UBERON:0007771;1.49e-08;2!UBERON:0003297;1.49e-08;2!UBERON:0001821;1.49e-08;2!UBERON:0003487;1.49e-08;2!UBERON:0001820;1.49e-08;2!UBERON:0010077;3.40e-08;4!UBERON:0005389;3.40e-08;4!UBERON:0000484;3.40e-08;4!UBERON:0000965;3.40e-08;4!UBERON:0001803;3.40e-08;4!UBERON:0011159;2.44e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,3.42e-12,5;UBERON:0001949,1.71e-11,3;UBERON:0002118,5.95e-11,5;UBERON:0005910,3.67e-10,6;UBERON:0001708,3.47e-09,4;UBERON:0008895,3.47e-09,4;UBERON:0002419,1.50e-08,2;UBERON:0007771,1.50e-08,2;UBERON:0003297,1.50e-08,2;UBERON:0001821,1.50e-08,2;UBERON:0003487,1.50e-08,2;UBERON:0001820,1.50e-08,2;UBERON:0005089,1.50e-08,2;UBERON:0005088,1.50e-08,2;UBERON:0010077,4.07e-08,4;UBERON:0005389,4.07e-08,4;UBERON:0000484,4.07e-08,4;UBERON:0002546,4.07e-08,4;UBERON:0000965,4.07e-08,4;UBERON:0001803,4.07e-08,4;UBERON:0003073,4.07e-08,4;UBERON:0005426,4.07e-08,4;UBERON:0011159,2.04e-07,5;UBERON:0000076,8.33e-07,8 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0,2.00146596706261,0,0,0,0,0,0.245733936501509,0,0.655324116390517,0,0,0,0,0,0,0.487932798790507,0,0,0.313454721478088,0.286235987131057,0.136874425072884,0,0,0,0,0,0,0,0,0.90361775633475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.15757352345989,1.45990461090791,0.0945348171640679,0.886917589850256,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0.496971951695318,0.12663051166458,0.132409180813219,0,0,0.560677600142307,0,2.22000793575444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.794025282120147,0.358779271377724,0.640672166455702,0,0.300091096084402,0.309157587715317,0.257640540045629,0,0.168776332241266,0.194874010322397,0.504867548488229,0,0,0.355009592516614,0.10075209822764,0,1.93260853163297,4.36393792945335,2.86804595389004,0,0,0,0,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02940686179115,3.51200913307602,0,3.61904300681871,0.185176890317059,0,0,1.44331342025273,0.115930404975077,1.05667824812239,0,0,0,0,0,0,0,0,4.68669169933885,13.7745345123065,2.97727704209012,0.447792613514241,0.581267877027924,1.15014803749563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03417372606222,0,0,0,0,0,0,0,0.142977993658148,0,0,0.65147236858747,0,0,1.50719688529793,1.74306691720059,0.699810938274399,0,0,0,0,0,0,0.723906533337896,0,0.895304816199478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,3.63753085735511,0,5.14063498660456,0.496215615637554,1.2276957863045,0,0.512556597022804,0.511707249066704,0.965123526861645,2.96836132889982,0.154209693802656,0.177561725313127,0.0821271560138091,0,0,0,11.6293752775905,0,0,0,0,0,0.15403067420883,0,0,0.422206515571503,0,0,0.215915916102139,0,0.270946437543853,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,4.59412430396938,4.55042172225565,0,0.290012154876366,0,0,0.137836572484531,0.107420244868274,0,0,0.534192213880424,10.9088044138246,7.87979276196935,12.888883961953,0.809262246844399,0.929691098594572,1.25924938732256,0,0,0.532306030317022,0,0.37064843820784,0.858749320451947,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405820753925408,0,0,0,0.196498082026242,0,0,0,0,0,0,0.769776901804097,1.34060455107157,1.08890984861323,0,5.59656984472599,3.36942951335251,2.21715076768338,8.04031900724358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0.146508179271894,0,0,0,7.87856799634377,0,5.83605333988541,0,0,0.111308705022906,0,0,0,0,0,0.102268682502155,0,0.622079175323615,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683652335082007,0,0,0,2.23300811812344,0.183195186803725,0.533034776018635,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.26353937109047,0,0,0,0,0,0,0,0,0.822251547880505,0,0,0,0.480952921509202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.859530882839914,0,0,0.229160424011684,0,0.199679000498991,0,0,0,0.720599767084807,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.39460383124975,0,0.340776043570843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0.306345576763462,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0,0.298509605773748,1.40227985908335,0,0.757612021100357,0,0,0,0,1.86524640699337,0.591420599958536,0.159296767163702,0,0.465788870628778,0,0.53168342911599,2.08698024724694,2.70463696194993,1.14241563650639,2.44122439922797,1.09109195521536,1.18151612746737,0.464033759878494,1.59238355479446,0.400027764663154,0,0,2.52369796457302,0,0,0,0.680117776536817,0,0,0.179088841081487,0.308801447160972,0,0,0.38582807654183,0,0,0,0,0,0,0,0,0,0.983091635014877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52552838186867,0,0,0,1.21023041222112,0,0,0,1.18284868973636,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,6.17356833974707,0,0,0,0,0,0,0,0,2.80705868584208,0,0,0,0,0,0,0,0,0.691259661814092,0.430227358820278,0,0,0.423387050190929,0,0.62041277132864,2.8666168169323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339854229375634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253397002022874,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 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| ||
|short_description=p@chr16:14605182..14605213,- | |short_description=p@chr16:14605182..14605213,- | ||
}} | }} |
Latest revision as of 06:26, 25 July 2015
Short description: | p@chr16:14605182..14605213, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:14605182..14605213, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 3.13e-15 | 4 |
urothelial cell | 3.13e-15 | 4 |
general ecto-epithelial cell | 2.82e-12 | 14 |
epithelial cell of Malassez | 4.03e-12 | 3 |
gingival epithelial cell | 1.71e-11 | 3 |
sebum secreting cell | 1.50e-08 | 2 |
epithelial cell of sweat gland | 1.50e-08 | 2 |
epithelial cell of skin gland | 1.50e-08 | 2 |
acinar cell of sebaceous gland | 1.50e-08 | 2 |
crystallin accumulating cell | 4.07e-08 | 4 |
vertebrate lens cell | 4.07e-08 | 4 |
lens epithelial cell | 4.07e-08 | 4 |
epithelial cell | 4.08e-08 | 253 |
epidermal cell | 8.72e-07 | 9 |
respiratory epithelial cell | 8.87e-07 | 13 |
endo-epithelial cell | 9.90e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
urothelium | 3.42e-12 | 5 |
gingival epithelium | 1.71e-11 | 3 |
right ovary | 5.95e-11 | 5 |
transitional epithelium | 3.67e-10 | 6 |
jaw skeleton | 3.47e-09 | 4 |
splanchnocranium | 3.47e-09 | 4 |
skin gland | 1.50e-08 | 2 |
epidermis gland | 1.50e-08 | 2 |
gland of integumental system | 1.50e-08 | 2 |
sebaceous gland | 1.50e-08 | 2 |
skin sebaceous gland | 1.50e-08 | 2 |
sweat gland | 1.50e-08 | 2 |
sweat gland placode | 1.50e-08 | 2 |
sebaceous gland placode | 1.50e-08 | 2 |
cuboidal epithelium | 4.07e-08 | 4 |
transparent eye structure | 4.07e-08 | 4 |
simple cuboidal epithelium | 4.07e-08 | 4 |
cranial placode | 4.07e-08 | 4 |
lens of camera-type eye | 4.07e-08 | 4 |
epithelium of lens | 4.07e-08 | 4 |
lens placode | 4.07e-08 | 4 |
lens vesicle | 4.07e-08 | 4 |
primary subdivision of cranial skeletal system | 2.04e-07 | 5 |
external ectoderm | 8.33e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 6.08e-11 | 14 |
female reproductive organ cancer | 1.14e-08 | 27 |
reproductive organ cancer | 5.79e-08 | 29 |