FFCP PHASE1:Hg19::chr1:26607589..26607601,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:26607589..26607601,+ | |||
|coexpression_cluster_id=C853 | |||
|description=CAGE_peak_at_chr1:26607589..26607601,+ | |description=CAGE_peak_at_chr1:26607589..26607601,+ | ||
|id=chr1:26607589..26607601,+ | |id=chr1:26607589..26607601,+ | ||
|ontology_enrichment_celltype=CL:0002371!2.85e-21!591;CL:0000723!6.45e-20!436;CL:0000048!1.19e-19!430;CL:0000034!3.33e-19!444;CL:0000144!3.95e-18!625;CL:0002057!2.35e-16!42;CL:0000766!5.44e-15!76;CL:0000839!1.89e-14!70;CL:0000860!3.52e-14!45;CL:0000557!5.55e-14!71;CL:0002009!1.66e-12!65;CL:0002194!2.16e-12!63;CL:0000576!2.16e-12!63;CL:0000040!2.16e-12!63;CL:0000559!2.16e-12!63;CL:0002320!5.40e-12!365;CL:0000134!5.76e-12!358;CL:0000003!2.11e-11!722;CL:0000012!7.78e-10!682;CL:0000548!8.75e-10!679;CL:0000004!8.75e-10!679;CL:0000255!8.75e-10!679;CL:0000219!4.83e-09!390;CL:0000763!1.63e-08!112;CL:0000049!1.63e-08!112;CL:0000192!9.99e-08!42;CL:0000514!9.99e-08!42;CL:0000055!2.25e-07!180;CL:0000222!6.15e-07!119;CL:0000359!9.89e-07!32 | |ontology_enrichment_celltype=CL:0002371!2.85e-21!591;CL:0000723!6.45e-20!436;CL:0000048!1.19e-19!430;CL:0000034!3.33e-19!444;CL:0000144!3.95e-18!625;CL:0002057!2.35e-16!42;CL:0000766!5.44e-15!76;CL:0000839!1.89e-14!70;CL:0000860!3.52e-14!45;CL:0000557!5.55e-14!71;CL:0002009!1.66e-12!65;CL:0002194!2.16e-12!63;CL:0000576!2.16e-12!63;CL:0000040!2.16e-12!63;CL:0000559!2.16e-12!63;CL:0002320!5.40e-12!365;CL:0000134!5.76e-12!358;CL:0000003!2.11e-11!722;CL:0000012!7.78e-10!682;CL:0000548!8.75e-10!679;CL:0000004!8.75e-10!679;CL:0000255!8.75e-10!679;CL:0000219!4.83e-09!390;CL:0000763!1.63e-08!112;CL:0000049!1.63e-08!112;CL:0000192!9.99e-08!42;CL:0000514!9.99e-08!42;CL:0000055!2.25e-07!180;CL:0000222!6.15e-07!119;CL:0000359!9.89e-07!32 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.97e-20;33!CL:0002057;1.97e-20;33!CL:0000473;2.33e-18;39!CL:0000234;2.33e-18;39!CL:0000576;3.44e-11;48!CL:0000766;4.91e-11;69!CL:0000359;4.03e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,4.48e-23,48;CL:0000234,4.48e-23,48;CL:0000766,5.05e-22,72;CL:0000048,2.65e-21,427;CL:0000723,3.08e-21,433;CL:0000860,6.95e-21,42;CL:0002057,6.95e-21,42;CL:0000034,6.12e-20,441;CL:0000557,9.14e-20,67;CL:0000839,1.43e-19,66;CL:0002194,7.07e-18,59;CL:0000576,7.07e-18,59;CL:0000040,7.07e-18,59;CL:0000559,7.07e-18,59;CL:0002009,1.92e-17,61;CL:0000134,5.93e-14,354;CL:0002320,1.11e-13,361;CL:0000763,5.23e-11,108;CL:0000049,5.23e-11,108;CL:0000219,1.48e-10,386;CL:0000192,5.27e-08,43;CL:0000514,5.27e-08,43;CL:0000359,3.17e-07,32 | |||
|ontology_enrichment_development_v019=CL:0002057;2.56e-15;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!1.30e-17!216;UBERON:0002204!2.26e-16!167;UBERON:0002371!1.35e-13!80;UBERON:0002193!1.14e-12!112;UBERON:0002390!2.54e-12!102;UBERON:0003061!2.54e-12!102;UBERON:0001474!1.15e-11!86;UBERON:0002384!1.60e-11!375;UBERON:0004765!4.18e-11!101;UBERON:0001434!4.18e-11!101;UBERON:0001637!6.43e-08!42;UBERON:0003509!6.43e-08!42;UBERON:0004572!6.43e-08!42;UBERON:0002405!9.13e-08!115;UBERON:0000486!2.17e-07!82 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,5.76e-20,167;UBERON:0003081,5.84e-20,203;UBERON:0000926,2.45e-19,315;UBERON:0004120,2.45e-19,315;UBERON:0006603,2.45e-19,315;UBERON:0002371,1.41e-18,76;UBERON:0001474,2.18e-16,82;UBERON:0002390,1.32e-15,98;UBERON:0003061,1.32e-15,98;UBERON:0002193,3.03e-15,108;UBERON:0002405,4.62e-15,93;UBERON:0004765,9.07e-15,90;UBERON:0001434,9.70e-15,100;UBERON:0002384,6.16e-13,371;UBERON:0001637,1.57e-08,42;UBERON:0003509,1.57e-08,42;UBERON:0004572,1.57e-08,42;UBERON:0000486,1.42e-07,83;UBERON:0007503,3.19e-07,78;UBERON:0004573,3.50e-07,33;UBERON:0004571,3.50e-07,33 | |||
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| ||
|short_description=p@chr1:26607589..26607601,+ | |short_description=p@chr1:26607589..26607601,+ | ||
}} | }} |
Latest revision as of 06:35, 28 July 2015
Short description: | p@chr1:26607589..26607601, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:26607589..26607601, + |
Coexpression cluster: | C853_Neutrophils_leiomyoma_Smooth_Monocytederived_CD14_Osteoblast_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 4.48e-23 | 48 |
phagocyte | 4.48e-23 | 48 |
myeloid leukocyte | 5.05e-22 | 72 |
multi fate stem cell | 2.65e-21 | 427 |
somatic stem cell | 3.08e-21 | 433 |
classical monocyte | 6.95e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.95e-21 | 42 |
stem cell | 6.12e-20 | 441 |
granulocyte monocyte progenitor cell | 9.14e-20 | 67 |
myeloid lineage restricted progenitor cell | 1.43e-19 | 66 |
monopoietic cell | 7.07e-18 | 59 |
monocyte | 7.07e-18 | 59 |
monoblast | 7.07e-18 | 59 |
promonocyte | 7.07e-18 | 59 |
macrophage dendritic cell progenitor | 1.92e-17 | 61 |
mesenchymal cell | 5.93e-14 | 354 |
connective tissue cell | 1.11e-13 | 361 |
myeloid cell | 5.23e-11 | 108 |
common myeloid progenitor | 5.23e-11 | 108 |
motile cell | 1.48e-10 | 386 |
smooth muscle cell | 5.27e-08 | 43 |
smooth muscle myoblast | 5.27e-08 | 43 |
vascular associated smooth muscle cell | 3.17e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 5.76e-20 | 167 |
lateral plate mesoderm | 5.84e-20 | 203 |
mesoderm | 2.45e-19 | 315 |
mesoderm-derived structure | 2.45e-19 | 315 |
presumptive mesoderm | 2.45e-19 | 315 |
bone marrow | 1.41e-18 | 76 |
bone element | 2.18e-16 | 82 |
hematopoietic system | 1.32e-15 | 98 |
blood island | 1.32e-15 | 98 |
hemolymphoid system | 3.03e-15 | 108 |
immune system | 4.62e-15 | 93 |
skeletal element | 9.07e-15 | 90 |
skeletal system | 9.70e-15 | 100 |
connective tissue | 6.16e-13 | 371 |
artery | 1.57e-08 | 42 |
arterial blood vessel | 1.57e-08 | 42 |
arterial system | 1.57e-08 | 42 |
multilaminar epithelium | 1.42e-07 | 83 |
epithelial vesicle | 3.19e-07 | 78 |
systemic artery | 3.50e-07 | 33 |
systemic arterial system | 3.50e-07 | 33 |