FFCP PHASE1:Hg19::chr1:2487932..2487943,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8764 | |EntrezGene=8764 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11912 | |HGNC=11912 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-52bp_to_ENST00000496064_5end | |association_with_transcript=-52bp_to_ENST00000496064_5end | ||
|cluster_id=chr1:2487932..2487943,+ | |||
|coexpression_cluster_id=C58 | |||
|description=CAGE_peak_10_at_TNFRSF14_5end | |description=CAGE_peak_10_at_TNFRSF14_5end | ||
|id=chr1:2487932..2487943,+ | |id=chr1:2487932..2487943,+ | ||
|ontology_enrichment_celltype=CL:0000738!2.52e-16!140;CL:0002031!3.94e-16!124;CL:0002087!1.36e-15!119;CL:0000557!2.72e-15!71;CL:0000766!8.13e-15!76;CL:0000839!2.50e-14!70;CL:0000988!9.70e-14!182;CL:0002009!2.68e-13!65;CL:0002194!3.42e-13!63;CL:0000576!3.42e-13!63;CL:0000040!3.42e-13!63;CL:0000559!3.42e-13!63;CL:0002057!2.14e-12!42;CL:0000037!2.50e-12!172;CL:0000566!2.50e-12!172;CL:0002032!4.15e-12!165;CL:0000837!4.15e-12!165;CL:0000860!1.07e-10!45;CL:0000763!4.56e-09!112;CL:0000049!4.56e-09!112 | |ontology_enrichment_celltype=CL:0000738!2.52e-16!140;CL:0002031!3.94e-16!124;CL:0002087!1.36e-15!119;CL:0000557!2.72e-15!71;CL:0000766!8.13e-15!76;CL:0000839!2.50e-14!70;CL:0000988!9.70e-14!182;CL:0002009!2.68e-13!65;CL:0002194!3.42e-13!63;CL:0000576!3.42e-13!63;CL:0000040!3.42e-13!63;CL:0000559!3.42e-13!63;CL:0002057!2.14e-12!42;CL:0000037!2.50e-12!172;CL:0000566!2.50e-12!172;CL:0002032!4.15e-12!165;CL:0000837!4.15e-12!165;CL:0000860!1.07e-10!45;CL:0000763!4.56e-09!112;CL:0000049!4.56e-09!112 | ||
|ontology_enrichment_celltype_v019=CL:0000148;2.56e-14;10!CL:0002567;4.20e-10;3!CL:0000147;7.31e-10;14!CL:0002144;1.04e-09;3!CL:0000766;1.23e-08;69!CL:0000576;2.81e-08;48!CL:0000473;1.31e-07;39!CL:0000234;1.31e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,5.21e-16,72;CL:0000557,5.35e-16,67;CL:0000148,2.96e-14,10;CL:0000541,2.96e-14,10;CL:0002009,2.09e-13,61;CL:0000839,2.65e-13,66;CL:0000763,8.12e-13,108;CL:0000049,8.12e-13,108;CL:0000988,1.08e-12,177;CL:0002194,1.72e-12,59;CL:0000576,1.72e-12,59;CL:0000040,1.72e-12,59;CL:0000559,1.72e-12,59;CL:0000738,1.99e-12,136;CL:0002032,6.74e-12,161;CL:0000837,6.74e-12,161;CL:0002031,8.06e-12,120;CL:0000473,8.81e-12,48;CL:0000234,8.81e-12,48;CL:0000037,4.86e-11,168;CL:0002567,4.31e-10,3;CL:0000147,8.06e-10,14;CL:0002087,1.22e-09,115;CL:0002144,1.25e-09,3;CL:0000860,6.87e-09,42;CL:0002057,6.87e-09,42 | |||
|ontology_enrichment_development_v019=CL:0002057;5.37e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;4.74e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,4.20e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0002193!4.87e-20!112;UBERON:0002390!5.71e-17!102;UBERON:0003061!5.71e-17!102;UBERON:0002405!3.57e-15!115;UBERON:0002371!1.76e-12!80;UBERON:0001474!1.04e-11!86;UBERON:0004765!3.59e-09!101;UBERON:0001434!3.59e-09!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0010523;1.04e-09;3!UBERON:0001915;1.04e-09;3!UBERON:0001982;1.04e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002405,1.19e-14,93;UBERON:0002193,6.16e-14,108;UBERON:0002371,2.09e-13,76;UBERON:0001474,3.26e-13,82;UBERON:0002390,2.90e-12,98;UBERON:0003061,2.90e-12,98;UBERON:0004765,1.68e-11,90;UBERON:0001434,9.25e-10,100;UBERON:0010523,1.25e-09,3;UBERON:0001915,1.25e-09,3;UBERON:0001982,1.25e-09,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0.136874425072884,0,0.61130724598361,0.164201178899891,0.236132343941038,0,0,0.464448369948228,0,0.30120591877825,0,0.154934401160603,1.42169232487422,0,0.553995408531877,0.401088894940283,1.30206522429511,0.671746422719773,1.29557466407592,1.54545340580512,0.436194716338694,0.377875943688809,0,1.62700325833979,1.6446715520873,3.09706370895104,1.1507695692886,0.256160706529101,0.709446689665756,0.689491361473237,1.29096936716765,0,0.752969358170419,1.63743690034707,1.34834090667051,0.918251677112708,0.641858054152187,0.639337125799041,0,0.598390972864896,0,0.290209238628584,0,0,0.502497330513487,2.08593167368081,1.08594422352558,0,1.10483290796269,1.58231193720442,0.422510572623884,1.06302149982522,1.04829322754188,0.22465726229299,0.300353785683013,0,0.855038231223746,0.99458338599545,0.182664153764634,0,0,0,0,0.400395987036012,0,0,0,0.569212969109448,0.587237189370939,1.14681968437569,0,1.68152568894461,0.526768169550154,0.393419540227666,0,0,0.501559486172034,0,0,0,0.445641827540694,0.294605907474837,0.221533894583621,0,0.768547918354051,0.260118695119756,0.164437904603676,1.10540007114339,0.579606171470105,0,0.267540828089713,0,0.339928028092699,0.383220493601921,0,0,0,0,0,0,0.383959833463255,0,0.473554504088034,0.821127996921047,1.00803371612366,0,0.434473211648397,0,0,0,0,0,0.144846518960824,0,0,0.189069634328136,0.665188192387692,0.351339142772504,0.196468613246569,0.364295288292542,0.370784442784429,0,0.522389211897802,1.19662164466979,0,0,0,0,0,0,0,0.419499436209906,0.550236083880135,0,0.775250277507987,0.71153252537342,0.66944122552934,4.02829317109147,3.04108842287405,2.19655851793353,0,0,0.357198913136319,0,0,0,0,0.183201743930407,2.63560834872127,0,0.436094052142534,0,0,0.264818361626438,0,0,0,0,0,0,0,0,0.454072282934794,0,0,0,0.570471821544449,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0.150238058906597,0.113432183160021,0,0,0,0,0,0.515281080091258,0.18611685633159,0,0,0,0,0.161646056818812,0,0,0.169560592310488,0.386521706326594,0,1.14721838155602,0,0,0,0,0,0,0,0.643240938192885,1.38134921352481,0,0,0,0,0,0,0.217879444092406,0,0,0,0,0.738155454624648,0,0,0,2.53510069643662,0.982827216677626,0,0.882926198829301,0,0.171567810298526,0.219500570817251,0,0.100528972411631,0,0,0,0,0,0.117408694235822,1.29929802984966,2.77791307545966,3.42457474022277,0,0,0.984868024349589,0.702012795417713,0.445893486866185,0.93733833986777,0.16798212819886,0.425325291727159,0.179117045405697,0,0,0,0.968532774145487,0.414656231081544,1.15295962733569,1.38866676769018,3.36538839748496,6.49380323449072,17.582617081507,8.55362230113526,2.05654985406647,19.5222987598546,11.7188837378537,0.224262168690721,0.43596006883328,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0.099972991182057,3.64871341923571,2.00902836572851,4.21667878966063,0.239624855491583,0,0,0,0,0,0.112085143993527,0.394061520403854,0,0,0,0,0,0.167516265334349,0,1.49801404789436,0,1.24324654030811,0,0,0,0,0.178428988797162,0,0.117141414992713,0,0,0,0,0.184369168541703,0.0868836144680828,7.04884166865866,1.37257369524342,0.206768026122887,0.431428401637234,0.213455115606889,0,1.66435439510497,0,0,0,0,0.128139149255701,0.511707249066704,0,0,0,0,0,0,0,0,0.200506470303285,0.0920809889358963,0.114814448164607,0.182091168006717,0.655622074797121,0,0,0,0,0,1.13733384070897,0.170093705276516,0,0,0,0,0,0,0,0.219259876645935,0,0.256450125116389,0.328014645699706,0.325378394664303,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0.495854746082934,0,0.382838137483752,0,0.464845549297286,0.31481234683064,0.6970372701606,0,0,0,0,0,1.116475108079,0.316379424718726,0,0,0.42793898803392,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0.272999822815972,0,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43050537267123,0,0.886860307073351,0.229723400206959,0.507447609232169,0,0.569647187174163,0.476463550915578,0.411362273086194,1.94541993357815,0,0,0,0,0.245040215981032,0.185803175125719,0.144269212976445,0.426851060090485,0.159426272728822,0.59873811429845,1.53204296105893,4.44514523720154,0,0.280797178113459,0.228234679033192,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0.439524537815682,0,0,0,0,0,0,0.994147647766298,0.422008249231538,0,0.329607748453519,0,0,0.552567831062295,0,0,1.96935688737711,0,0,0,0,0.295930216910801,0,0,0,0.185536196323703,0,0,0,0,0.1137934482855,0,0,0,0,0.173624994933292,0,0.120596438625408,0,0,0.295547618953547,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0.638002319463839,0.0915975934018623,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0.611030144933625,1.48260564340311,0.86494757262552,0.208843899010911,0.134802265961354,0,0.234264445725339,0,0.391329237864179,0,0.789168805698781,1.20990716048664,0,0.126373159256976,0,0,0,0,0,0,0,0,0.347119476670262,0,0,0.17472666824203,0.171986032471617,0,0,0,0.0969890164884194,0.353024506766001,0,0.137041924646751,0.397429223405979,0.253243183823515,0.1955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| 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| ||
|short_description=p10@TNFRSF14 | |short_description=p10@TNFRSF14 | ||
}} | }} |
Latest revision as of 01:01, 17 September 2015
Short description: | p10@TNFRSF14 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_TNFRSF14_5end |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | -52bp_to_ENST00000496064_5end |
EntrezGene: | TNFRSF14 |
HGNC: | 11912 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 5.21e-16 | 72 |
granulocyte monocyte progenitor cell | 5.35e-16 | 67 |
melanocyte | 2.96e-14 | 10 |
melanoblast | 2.96e-14 | 10 |
macrophage dendritic cell progenitor | 2.09e-13 | 61 |
myeloid lineage restricted progenitor cell | 2.65e-13 | 66 |
myeloid cell | 8.12e-13 | 108 |
common myeloid progenitor | 8.12e-13 | 108 |
hematopoietic cell | 1.08e-12 | 177 |
monopoietic cell | 1.72e-12 | 59 |
monocyte | 1.72e-12 | 59 |
monoblast | 1.72e-12 | 59 |
promonocyte | 1.72e-12 | 59 |
leukocyte | 1.99e-12 | 136 |
hematopoietic oligopotent progenitor cell | 6.74e-12 | 161 |
hematopoietic multipotent progenitor cell | 6.74e-12 | 161 |
hematopoietic lineage restricted progenitor cell | 8.06e-12 | 120 |
defensive cell | 8.81e-12 | 48 |
phagocyte | 8.81e-12 | 48 |
hematopoietic stem cell | 4.86e-11 | 168 |
light melanocyte | 4.31e-10 | 3 |
pigment cell | 8.06e-10 | 14 |
nongranular leukocyte | 1.22e-09 | 115 |
capillary endothelial cell | 1.25e-09 | 3 |
classical monocyte | 6.87e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.87e-09 | 42 |
Ontology term | p-value | n |
---|---|---|
immune system | 1.19e-14 | 93 |
hemolymphoid system | 6.16e-14 | 108 |
bone marrow | 2.09e-13 | 76 |
bone element | 3.26e-13 | 82 |
hematopoietic system | 2.90e-12 | 98 |
blood island | 2.90e-12 | 98 |
skeletal element | 1.68e-11 | 90 |
skeletal system | 9.25e-10 | 100 |
microcirculatory vessel | 1.25e-09 | 3 |
endothelium of capillary | 1.25e-09 | 3 |
capillary | 1.25e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
melanoma | 4.20e-07 | 2 |