FFCP PHASE1:Hg19::chr1:248020527..248020554,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25893 | |EntrezGene=25893 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24150 | |HGNC=24150 | ||
|TSSclassifier=strong | |||
|UniProt=Q8NG06 | |UniProt=Q8NG06 | ||
|association_with_transcript=26bp_to_ENST00000366481,NM_015431,uc001ido.2_5end | |association_with_transcript=26bp_to_ENST00000366481,NM_015431,uc001ido.2_5end | ||
|cluster_id=chr1:248020527..248020554,+ | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_3_at_TRIM58_5end | |description=CAGE_peak_3_at_TRIM58_5end | ||
|id=chr1:248020527..248020554,+ | |id=chr1:248020527..248020554,+ | ||
|ontology_enrichment_celltype=CL:0000077!1.41e-09!19;CL:0000763!1.29e-07!112;CL:0000049!1.29e-07!112 | |ontology_enrichment_celltype=CL:0000077!1.41e-09!19;CL:0000763!1.29e-07!112;CL:0000049!1.29e-07!112 | ||
|ontology_enrichment_celltype_v019=CL:0000077;3.58e-10;19!CL:0000174;7.48e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,3.31e-10,19;CL:0000763,4.45e-10,108;CL:0000049,4.45e-10,108;CL:0000174,5.28e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0007123;3.55e-08;5 | |||
|ontology_enrichment_disease=DOID:8692!1.59e-12!31;DOID:1240!5.72e-10!39;DOID:2531!4.57e-07!51;DOID:0060083!4.57e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;9.15e-24;31!DOID:1240;2.47e-17;39!DOID:2531;1.08e-12;51!DOID:0060083;1.08e-12;51!DOID:1036;1.18e-09;8 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,6.64e-25,31;DOID:1240,1.34e-20,39;DOID:2531,1.21e-17,51;DOID:0060083,1.21e-17,51;DOID:1036,6.64e-10,8;DOID:0050686,1.19e-08,137 | |||
|ontology_enrichment_uberon=UBERON:0000178!2.34e-13!15;UBERON:0000179!2.34e-13!15;UBERON:0000463!2.34e-13!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.94e-18;15!UBERON:0000179;1.94e-18;15!UBERON:0000463;1.94e-18;15!UBERON:0002390;6.66e-15;32!UBERON:0002046;3.55e-08;5!UBERON:0002193;2.66e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.99e-18,15;UBERON:0000179,1.99e-18,15;UBERON:0000463,1.99e-18,15;UBERON:0002046,4.68e-08,5;UBERON:0004117,4.68e-08,5;UBERON:0007689,4.68e-08,5;UBERON:0007123,4.68e-08,5;UBERON:0003091,4.68e-08,5 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0.872338524100369,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0.246242116153576,0.204000691244253,0,0,0.136874425072884,0,0,0,0,0,0.383829398097213,0.154816123316076,0,0,0,0,0,5.87200878669694,0.553995408531877,0,0.217010870715852,0.447830948479849,0,0,0.581592955118259,0,0.242584061187816,0,0,0,0,0,0,0.344745680736619,0.645484683583826,1.35426486594342,0.564727018627814,0,0,0,0,0,0.329851300186716,0.598390972864896,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0.112328631146495,0,0,0,0,0.182664153764634,0,1.09227722252426,0,0.426730222566507,0,0,0,0.954053754535364,0,0.587237189370939,0.382273228125229,7.93027971474155,3.36305137788922,2.89722493252585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04535523804977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,0,0,0.087834785693126,0.130979075497713,0,0,0,0,0.26591592103773,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0.132409180813219,0,0,1.12135520028461,0,0.24666754841716,0.311211035399766,0,0.163461903113459,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0.286804595389004,0,0,0,0,0,0,0,0.643240938192885,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.11980435583874,0,0,0,0,0,0,0,0,0.984868024349589,0,0,0,0,0,0.268675568108545,0,1.15014803749563,0,0.792435906119034,0.621984346622316,0.144119953416961,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0.531876233169741,0,0,0,0.266422179016099,0.142977993658148,0,0,0,0,0,0.301439377059586,0,2.39935178836937,0,1.00451418286425,0,0,0,0,1.01346914667305,0.205476322550383,0,0,0,0,0.256686072559497,0,0,0,0.167516265334349,0.637938751653163,0,5.9832291840805,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0.82707210449155,0.431428401637234,1.28073069364133,0,1.66435439510497,0.604780586659361,0.248107807818777,0.460385919864187,0,0.128139149255701,0,0.965123526861645,1.48418066444991,0.154209693802656,0,0.164254312027618,0,0.116210378459959,0,0,0,0,0,0,0,0.462092022626489,0,0,0.422206515571503,0,0,0.431831832204279,0,0.541892875087706,1.50506932156456,0.254876273045038,0.831076008928724,0.223874754722178,7.45483580596178,9.15024078587152,0.512900250232778,1.96808787419823,0.976135183992909,0.515205058238611,0.824125183365091,0.577566499444116,0,0,0,0,0,0.15350367472613,0,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.54907405947211,0,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0,0.281695602532241,0.143411352204052,0.0982490410131212,0,0,0.633322905892992,0.329294892959902,0,0,0,0,0,0.564862804660675,0,0,0,0,15.2234282769651,12.234195314278,18.2287099895732,6.19402616190251,1.64544909234478,12.9694662238543,16.2009431171434,18.2418790547682,0,0.962479855263359,0.735120647943095,0,0,1.06712765022621,0.478278818186467,2.19537308576098,2.10655907145603,1.05836791361941,0.324621940274555,1.40398589056729,0,0,0,1.35433422241283,0.1605880751037,0,0,0,1.53620382154229,2.46043718681657,1.83534055883099,1.17232857241224,0.835218521685727,6.15436994738562,3.51592382018778,5.66222345596294,7.04935025439248,0,0,0.36408156524854,0,0,0.47748896947538,1.18785872333055,0.307160702099232,0,0,0,0,0,0.398495976502139,0.276283915531148,0,0,0,0,0,0,0,0.295930216910801,4.7896618469388,0,0,0.0927680981618513,0,0,0,0,0,0,0.709163045303809,0,0,0,0,0.241192877250816,0,0,0,0.219385397153973,0,0,0,8.43171213267809,0,0,0,1.27600463892768,0.915975934018623,1.5991043280559,0,3.45356564069054,2.82559859230266,1.57916962432026,0.784250137270958,1.34257269580674,1.70778359451767,2.38404868470568,0,0,0,0,0,0.0884575645033392,0,0.889563386041866,0.617819694732514,1.14864144456001,0.067401132980677,0.802577647298789,0.234264445725339,0,0,0,0,0,0,0.31593289814244,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0.0979923974143777,0,0.17472666824203,0,0,0,0,0,0,0,0.548167698587004,1.78843150532691,0.379864775735272,0,0.160317640503067,0.213452994739353,0.999048047910651,0,0,0,0,0,0,0,0,0,0,0,0,3.83239764200917,6.44648162129936,0,0,0,0,0,0,0.446342914883745,0.201550417460179,1.08089965062721,0,0,0,0,0,0,0,0.136203406111576,0,0.137539436597234,0,0,0,0.242998226632099,0,0.0788057072991982,0.104909176269996,0,0,0,0,0,0,0,0,0,3.59190574687462,1.4776653734881,0.170388021785422,0.226624183040251,0.146552233678082,1.32506888912221,0.258565912723101,0.39669780522807,0,0,0.320362237703084,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0.366078794705889,0.1251909307065,0,0.110929051536852,0.248385611765534,12.3130285093245,0,0,0.285465333544967,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0.15543720058278,0,0.159296767163702,0,0.621051827505038,0,0,0,0.901545653983311,0,0.406870733204662,0,0.537052785212442,0,0,0,0,0,1.26184898228651,2.88929745610955,1.50109113962448,0.782982875895635,1.13352962756136,0.926089897295336,4.16052397660995,2.8654214573038,0.617602894321944,1.31570429747224,1.23682402162117,3.08662461233464,0.6757697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| ||
|short_description=p3@TRIM58 | |short_description=p3@TRIM58 | ||
}} | }} |
Latest revision as of 00:28, 17 September 2015
Short description: | p3@TRIM58 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TRIM58_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | 26bp_to_ENST00000366481, NM_015431, uc001ido.2_5end |
EntrezGene: | TRIM58 |
HGNC: | 24150 |
UniProt: | Q8NG06 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 3.31e-10 | 19 |
myeloid cell | 4.45e-10 | 108 |
common myeloid progenitor | 4.45e-10 | 108 |
steroid hormone secreting cell | 5.28e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 1.99e-18 | 15 |
haemolymphatic fluid | 1.99e-18 | 15 |
organism substance | 1.99e-18 | 15 |
thyroid gland | 4.68e-08 | 5 |
pharyngeal pouch | 4.68e-08 | 5 |
thyroid diverticulum | 4.68e-08 | 5 |
pharyngeal pouch 2 | 4.68e-08 | 5 |
thyroid primordium | 4.68e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 6.64e-25 | 31 |
leukemia | 1.34e-20 | 39 |
hematologic cancer | 1.21e-17 | 51 |
immune system cancer | 1.21e-17 | 51 |
chronic leukemia | 6.64e-10 | 8 |
organ system cancer | 1.19e-08 | 137 |