FFCP PHASE1:Hg19::chr11:61735103..61735112,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:61735103..61735112,-
|short_description=p1@FTH1
|description=CAGE_peak_1_at_FTH1_5end
|association_with_transcript=0bp_to_ENST00000529191,ENST00000529548,...") |
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(14 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2495 | |EntrezGene=2495 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3976 | |HGNC=3976 | ||
|UniProt=E9PK45, | |TSSclassifier=strong | ||
|UniProt=E9PK45,E9PPQ4,E9PKM5,E9PKY7,E9PRK8,E9PQR3 | |||
|association_with_transcript=0bp_to_ENST00000529191,ENST00000529548,ENST00000529631,ENST00000530019,ENST00000532829,ENST00000534180_5end | |||
|cluster_id=chr11:61735103..61735112,- | |||
|coexpression_cluster_id=C804 | |||
|description=CAGE_peak_1_at_FTH1_5end | |||
|id=chr11:61735103..61735112,- | |||
|ontology_enrichment_celltype=CL:0000766!9.01e-22!76;CL:0002057!3.97e-21!42;CL:0002194!5.41e-21!63;CL:0000576!5.41e-21!63;CL:0000040!5.41e-21!63;CL:0000559!5.41e-21!63;CL:0000860!1.92e-20!45;CL:0002009!1.48e-19!65;CL:0000839!8.86e-19!70;CL:0000557!1.02e-16!71;CL:0000548!1.81e-14!679;CL:0000004!1.81e-14!679;CL:0000255!1.81e-14!679;CL:0000012!2.31e-14!682;CL:0002371!1.22e-13!591;CL:0000048!1.89e-13!430;CL:0000144!1.72e-12!625;CL:0000723!2.60e-12!436;CL:0000034!1.97e-11!444;CL:0000003!6.33e-10!722;CL:0002320!2.85e-09!365;CL:0000063!1.67e-08!578;CL:0000222!2.35e-08!119;CL:0000763!3.34e-08!112;CL:0000049!3.34e-08!112;CL:0000134!8.48e-08!358;CL:0000183!1.40e-07!59;CL:0000680!5.78e-07!57;CL:0000056!5.78e-07!57;CL:0000355!5.78e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.35e-17;33!CL:0002057;3.35e-17;33!CL:0000473;4.25e-17;39!CL:0000234;4.25e-17;39!CL:0000576;8.75e-12;48!CL:0000766;5.78e-10;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.72e-24,48;CL:0000234,2.72e-24,48;CL:0000766,1.47e-21,72;CL:0000860,3.97e-21,42;CL:0002057,3.97e-21,42;CL:0002194,7.09e-21,59;CL:0000576,7.09e-21,59;CL:0000040,7.09e-21,59;CL:0000559,7.09e-21,59;CL:0002009,2.21e-19,61;CL:0000839,1.51e-18,66;CL:0000557,1.91e-16,67;CL:0000048,2.55e-13,427;CL:0000723,3.47e-12,433;CL:0000034,2.61e-11,441;CL:0002320,6.13e-09,361;CL:0000222,6.89e-09,121;CL:0000763,7.80e-08,108;CL:0000049,7.80e-08,108;CL:0000134,1.70e-07,354;CL:0000680,2.65e-07,58;CL:0000056,2.65e-07,58;CL:0000355,2.65e-07,58;CL:0000187,9.30e-07,55 | |||
|ontology_enrichment_development_v019=CL:0002057;1.31e-15;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!5.00e-20!216;UBERON:0002204!7.88e-20!167;UBERON:0000926!2.21e-17!448;UBERON:0004120!2.21e-17!448;UBERON:0006603!2.21e-17!448;UBERON:0002371!4.27e-17!80;UBERON:0001474!1.22e-14!86;UBERON:0004765!1.24e-13!101;UBERON:0001434!1.24e-13!101;UBERON:0002193!3.22e-13!112;UBERON:0002390!5.50e-13!102;UBERON:0003061!5.50e-13!102;UBERON:0002405!1.03e-12!115;UBERON:0004535!3.83e-09!110;UBERON:0002384!4.97e-09!375;UBERON:0001009!1.46e-08!113;UBERON:0000468!1.79e-08!659;UBERON:0000923!3.58e-08!604;UBERON:0005291!3.58e-08!604;UBERON:0006598!3.58e-08!604;UBERON:0002532!3.58e-08!604;UBERON:0002050!4.49e-08!605;UBERON:0005423!4.49e-08!605;UBERON:0000922!1.23e-07!612;UBERON:0001637!2.09e-07!42;UBERON:0003509!2.09e-07!42;UBERON:0004572!2.09e-07!42;UBERON:0004872!2.85e-07!84;UBERON:0000467!3.52e-07!625;UBERON:0004290!4.15e-07!70;UBERON:0000480!4.84e-07!626 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,6.16e-22,315;UBERON:0004120,6.16e-22,315;UBERON:0006603,6.16e-22,315;UBERON:0002204,1.16e-20,167;UBERON:0003081,2.94e-20,203;UBERON:0002371,8.73e-17,76;UBERON:0004765,7.79e-15,90;UBERON:0001474,2.76e-14,82;UBERON:0001434,4.39e-14,100;UBERON:0002405,2.26e-13,93;UBERON:0002193,8.04e-13,108;UBERON:0002390,1.34e-12,98;UBERON:0003061,1.34e-12,98;UBERON:0004535,8.05e-09,109;UBERON:0002384,1.06e-08,371;UBERON:0000923,2.68e-08,560;UBERON:0010316,2.68e-08,560;UBERON:0005291,2.68e-08,560;UBERON:0006598,2.68e-08,560;UBERON:0010317,2.68e-08,560;UBERON:0002532,2.68e-08,560;UBERON:0001009,2.99e-08,112;UBERON:0007503,3.49e-08,78;UBERON:0002050,5.82e-08,564;UBERON:0002329,1.98e-07,71;UBERON:0003059,1.98e-07,71;UBERON:0007282,1.98e-07,71;UBERON:0004290,1.98e-07,71;UBERON:0009618,1.98e-07,71;UBERON:0001637,2.09e-07,42;UBERON:0003509,2.09e-07,42;UBERON:0004572,2.09e-07,42;UBERON:0007524,2.15e-07,73;UBERON:0003077,2.86e-07,72;UBERON:0007285,2.86e-07,72;UBERON:0005423,5.26e-07,581;UBERON:0004872,5.86e-07,83 | |||
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| ||
|short_description=p1@FTH1 | |||
}} | }} |
Latest revision as of 17:52, 18 September 2015
Short description: | p1@FTH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FTH1_5end |
Coexpression cluster: | C804_Smooth_mesenchymal_CD14_Mesenchymal_Cardiac_Adipocyte_Fibroblast |
Association with transcript: | 0bp_to_ENST00000529191, ENST00000529548, ENST00000529631, ENST00000530019, ENST00000532829, ENST00000534180_5end |
EntrezGene: | FTH1 |
HGNC: | 3976 |
UniProt: | E9PK45E9PPQ4E9PKM5E9PKY7E9PRK8E9PQR3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 2.72e-24 | 48 |
phagocyte | 2.72e-24 | 48 |
myeloid leukocyte | 1.47e-21 | 72 |
classical monocyte | 3.97e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.97e-21 | 42 |
monopoietic cell | 7.09e-21 | 59 |
monocyte | 7.09e-21 | 59 |
monoblast | 7.09e-21 | 59 |
promonocyte | 7.09e-21 | 59 |
macrophage dendritic cell progenitor | 2.21e-19 | 61 |
myeloid lineage restricted progenitor cell | 1.51e-18 | 66 |
granulocyte monocyte progenitor cell | 1.91e-16 | 67 |
multi fate stem cell | 2.55e-13 | 427 |
somatic stem cell | 3.47e-12 | 433 |
stem cell | 2.61e-11 | 441 |
connective tissue cell | 6.13e-09 | 361 |
mesodermal cell | 6.89e-09 | 121 |
myeloid cell | 7.80e-08 | 108 |
common myeloid progenitor | 7.80e-08 | 108 |
mesenchymal cell | 1.70e-07 | 354 |
muscle precursor cell | 2.65e-07 | 58 |
myoblast | 2.65e-07 | 58 |
multi-potent skeletal muscle stem cell | 2.65e-07 | 58 |
muscle cell | 9.30e-07 | 55 |