FFCP PHASE1:Hg19::chr15:98646940..98646945,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000560195_5end | |association_with_transcript=0bp_to_ENST00000560195_5end | ||
|cluster_id=chr15:98646940..98646945,- | |||
|description=CAGE_peak_1_at_ENST00000560195_5end | |description=CAGE_peak_1_at_ENST00000560195_5end | ||
|id=chr15:98646940..98646945,- | |id=chr15:98646940..98646945,- | ||
|ontology_enrichment_celltype=CL:0002150!7.60e-15!3;CL:0000861!7.60e-15!3 | |ontology_enrichment_celltype=CL:0002150!7.60e-15!3;CL:0000861!7.60e-15!3 | ||
|ontology_enrichment_celltype_v019=CL:0000322;9.90e-11;3!CL:0000082;6.77e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,9.90e-11,3;CL:0000082,6.77e-07,19 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.24e-12;10!UBERON:0005564;2.24e-12;10!UBERON:0007123;4.79e-07;5 | |||
|ontology_enrichment_disease=DOID:3093!1.78e-13!11;DOID:162!8.61e-12!235;DOID:14566!2.06e-11!239;DOID:1325!2.25e-11!7;DOID:3904!2.25e-11!7;DOID:5409!2.27e-11!4;DOID:3905!7.29e-09!9;DOID:0050615!1.89e-07!16;DOID:0050686!3.54e-07!137 | |ontology_enrichment_disease=DOID:3093!1.78e-13!11;DOID:162!8.61e-12!235;DOID:14566!2.06e-11!239;DOID:1325!2.25e-11!7;DOID:3904!2.25e-11!7;DOID:5409!2.27e-11!4;DOID:3905!7.29e-09!9;DOID:0050615!1.89e-07!16;DOID:0050686!3.54e-07!137 | ||
|ontology_enrichment_disease_v019=DOID:3112;7.48e-30;1!DOID:1325;4.73e-17;7!DOID:3904;4.73e-17;7!DOID:3910;2.05e-15;2!DOID:3905;1.69e-13;9!DOID:1324;1.71e-08;15!DOID:5409;2.43e-08;4!DOID:0050615;5.09e-08;16!DOID:3908;6.04e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:3112,7.48e-30,1;DOID:1325,4.73e-17,7;DOID:3904,4.73e-17,7;DOID:3910,2.05e-15,2;DOID:3905,1.69e-13,9;DOID:1324,1.71e-08,15;DOID:5409,2.43e-08,4;DOID:0050615,5.09e-08,16;DOID:3908,6.04e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0003135!1.62e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;2.05e-15;2!UBERON:0002173;2.05e-15;2!UBERON:0002186;2.05e-15;2!UBERON:0000473;3.29e-15;8!UBERON:0003135;2.42e-11;11!UBERON:0004821;9.90e-11;3!UBERON:0007499;9.90e-11;3!UBERON:0003215;9.90e-11;3!UBERON:0010368;9.90e-11;3!UBERON:0009911;9.90e-11;3!UBERON:0002299;9.90e-11;3!UBERON:0006524;9.90e-11;3!UBERON:0008874;9.90e-11;3!UBERON:0002169;9.90e-11;3!UBERON:0004894;9.90e-11;3!UBERON:0009856;2.26e-08;4!UBERON:0002046;4.79e-07;5!UBERON:0004802;6.77e-07;19!UBERON:0000115;6.77e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,2.05e-15,2;UBERON:0002173,2.05e-15,2;UBERON:0002186,2.05e-15,2;UBERON:0000473,3.29e-15,8;UBERON:0003135,2.42e-11,11;UBERON:0004821,9.90e-11,3;UBERON:0003215,9.90e-11,3;UBERON:0010368,9.90e-11,3;UBERON:0009911,9.90e-11,3;UBERON:0002299,9.90e-11,3;UBERON:0006524,9.90e-11,3;UBERON:0008874,9.90e-11,3;UBERON:0002169,9.90e-11,3;UBERON:0004894,9.90e-11,3;UBERON:0002046,4.79e-07,5;UBERON:0004117,4.79e-07,5;UBERON:0007689,4.79e-07,5;UBERON:0007123,4.79e-07,5;UBERON:0003091,4.79e-07,5;UBERON:0004802,6.77e-07,19;UBERON:0000115,6.77e-07,19 | |||
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|short_description=p1@ENST00000560195 | |short_description=p1@ENST00000560195 | ||
}} | }} |
Latest revision as of 05:56, 25 July 2015
Short description: | p1@ENST00000560195 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000560195_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000560195_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 9.90e-11 | 3 |
epithelial cell of lung | 6.77e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 2.05e-15 | 2 |
alveolar duct | 2.05e-15 | 2 |
bronchiole | 2.05e-15 | 2 |
testis | 3.29e-15 | 8 |
male reproductive organ | 2.42e-11 | 11 |
pulmonary alveolus epithelium | 9.90e-11 | 3 |
alveolus | 9.90e-11 | 3 |
pulmonary lobule | 9.90e-11 | 3 |
lobule | 9.90e-11 | 3 |
alveolus of lung | 9.90e-11 | 3 |
alveolar system | 9.90e-11 | 3 |
pulmonary acinus | 9.90e-11 | 3 |
alveolar sac | 9.90e-11 | 3 |
alveolar wall | 9.90e-11 | 3 |
thyroid gland | 4.79e-07 | 5 |
pharyngeal pouch | 4.79e-07 | 5 |
thyroid diverticulum | 4.79e-07 | 5 |
pharyngeal pouch 2 | 4.79e-07 | 5 |
thyroid primordium | 4.79e-07 | 5 |
respiratory tract epithelium | 6.77e-07 | 19 |
lung epithelium | 6.77e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 7.48e-30 | 1 |
bronchus cancer | 4.73e-17 | 7 |
bronchogenic carcinoma | 4.73e-17 | 7 |
lung adenocarcinoma | 2.05e-15 | 2 |
lung carcinoma | 1.69e-13 | 9 |
lung cancer | 1.71e-08 | 15 |
lung small cell carcinoma | 2.43e-08 | 4 |
respiratory system cancer | 5.09e-08 | 16 |
non-small cell lung carcinoma | 6.04e-07 | 5 |