FFCP PHASE1:Hg19::chr1:243893832..243893851,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:243893832..243893851,- | |||
|coexpression_cluster_id=C1310 | |||
|description=CAGE_peak_at_chr1:243893832..243893851,- | |description=CAGE_peak_at_chr1:243893832..243893851,- | ||
|id=chr1:243893832..243893851,- | |id=chr1:243893832..243893851,- | ||
|ontology_enrichment_celltype=CL:0002194!1.39e-14!63;CL:0000576!1.39e-14!63;CL:0000040!1.39e-14!63;CL:0000559!1.39e-14!63;CL:0002009!7.02e-14!65;CL:0000766!1.07e-12!76;CL:0000763!2.01e-12!112;CL:0000049!2.01e-12!112;CL:0000839!2.62e-12!70;CL:0000557!5.07e-12!71;CL:0002057!9.54e-11!42;CL:0000860!1.15e-09!45;CL:0002087!3.92e-08!119;CL:0000037!4.03e-08!172;CL:0000566!4.03e-08!172;CL:0002032!8.34e-08!165;CL:0000837!8.34e-08!165;CL:0000988!4.47e-07!182;CL:0002619!7.93e-07!3 | |ontology_enrichment_celltype=CL:0002194!1.39e-14!63;CL:0000576!1.39e-14!63;CL:0000040!1.39e-14!63;CL:0000559!1.39e-14!63;CL:0002009!7.02e-14!65;CL:0000766!1.07e-12!76;CL:0000763!2.01e-12!112;CL:0000049!2.01e-12!112;CL:0000839!2.62e-12!70;CL:0000557!5.07e-12!71;CL:0002057!9.54e-11!42;CL:0000860!1.15e-09!45;CL:0002087!3.92e-08!119;CL:0000037!4.03e-08!172;CL:0000566!4.03e-08!172;CL:0002032!8.34e-08!165;CL:0000837!8.34e-08!165;CL:0000988!4.47e-07!182;CL:0002619!7.93e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002619;2.44e-33;3!CL:0002166;1.42e-15;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002619,9.46e-34,3;CL:0002166,1.22e-15,3;CL:0000763,6.82e-09,108;CL:0000049,6.82e-09,108;CL:0002032,9.14e-07,161;CL:0000837,9.14e-07,161 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:8692;2.50e-16;31!DOID:1240;4.02e-13;39!DOID:225;7.02e-13;1!DOID:74;4.55e-07;2!DOID:2531;9.00e-07;51!DOID:0060083;9.00e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,4.79e-17,31;DOID:1240,2.00e-13,39;DOID:225,7.03e-13,1;DOID:2531,4.09e-10,51;DOID:0060083,4.09e-10,51;DOID:74,4.56e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!6.70e-19!115;UBERON:0001049!9.28e-17!57;UBERON:0005068!9.28e-17!57;UBERON:0006241!9.28e-17!57;UBERON:0007135!9.28e-17!57;UBERON:0001893!1.66e-16!34;UBERON:0002780!1.09e-15!41;UBERON:0001890!1.09e-15!41;UBERON:0006240!1.09e-15!41;UBERON:0002791!1.29e-15!33;UBERON:0003080!3.68e-15!42;UBERON:0002020!7.87e-15!34;UBERON:0003528!7.87e-15!34;UBERON:0001869!4.60e-14!32;UBERON:0002616!4.19e-13!59;UBERON:0001017!1.17e-11!82;UBERON:0000955!5.35e-11!69;UBERON:0006238!5.35e-11!69;UBERON:0002390!5.55e-11!102;UBERON:0003061!5.55e-11!102;UBERON:0005743!9.97e-11!86;UBERON:0002619!1.70e-10!22;UBERON:0001950!5.64e-10!20;UBERON:0002371!8.67e-10!80;UBERON:0000033!1.19e-09!123;UBERON:0000153!2.45e-09!129;UBERON:0007811!2.45e-09!129;UBERON:0003075!3.42e-09!86;UBERON:0007284!3.42e-09!86;UBERON:0002193!3.61e-09!112;UBERON:0000073!6.10e-09!94;UBERON:0001016!6.10e-09!94;UBERON:0000956!7.08e-09!25;UBERON:0000203!7.08e-09!25;UBERON:0001474!1.40e-08!86;UBERON:0003056!1.64e-08!61;UBERON:0002346!1.91e-08!90;UBERON:0004765!1.98e-08!101;UBERON:0001434!1.98e-08!101;UBERON:0002420!2.35e-08!9;UBERON:0007245!2.35e-08!9;UBERON:0010009!2.35e-08!9;UBERON:0010011!2.35e-08!9;UBERON:0000454!2.35e-08!9;UBERON:0002308!3.82e-08!9;UBERON:0000125!3.82e-08!9;UBERON:0009663!5.27e-08!7;UBERON:0000062!6.84e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0002336;2.60e-12;1!UBERON:0011215;2.60e-12;1!UBERON:0001018;2.60e-12;1!UBERON:0002473;2.60e-12;1!UBERON:0005340;2.60e-12;1!UBERON:0003544;2.60e-12;1!UBERON:0005970;2.60e-12;1!UBERON:0002316;2.60e-12;1!UBERON:0001020;2.60e-12;1!UBERON:0002437;2.60e-12;1!UBERON:0001708;6.37e-12;4!UBERON:0008895;6.37e-12;4!UBERON:0011159;1.01e-09;5!UBERON:0005162;8.76e-07;2!UBERON:0000122;8.76e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002336,4.31e-12,1;UBERON:0011215,4.31e-12,1;UBERON:0001018,4.31e-12,1;UBERON:0002473,4.31e-12,1;UBERON:0005340,4.31e-12,1;UBERON:0003544,4.31e-12,1;UBERON:0005970,4.31e-12,1;UBERON:0002316,4.31e-12,1;UBERON:0001020,4.31e-12,1;UBERON:0002437,4.31e-12,1;UBERON:0001708,5.70e-12,4;UBERON:0008895,5.70e-12,4;UBERON:0011159,9.28e-10,5;UBERON:0010188,2.81e-08,6;UBERON:0002539,2.81e-08,6;UBERON:0008816,2.81e-08,6;UBERON:0004765,5.88e-07,90 | |||
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|short_description=p@chr1:243893832..243893851,- | |short_description=p@chr1:243893832..243893851,- | ||
}} | }} |
Latest revision as of 05:53, 28 July 2015
Short description: | p@chr1:243893832..243893851, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:243893832..243893851, - |
Coexpression cluster: | C1310_myelodysplastic_acute_granulocyte_biphenotypic_CD14_anaplastic_medulloblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult endothelial progenitor cell | 9.46e-34 | 3 |
epithelial cell of Malassez | 1.22e-15 | 3 |
myeloid cell | 6.82e-09 | 108 |
common myeloid progenitor | 6.82e-09 | 108 |
hematopoietic oligopotent progenitor cell | 9.14e-07 | 161 |
hematopoietic multipotent progenitor cell | 9.14e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
corpus callosum | 4.31e-12 | 1 |
central nervous system cell part cluster | 4.31e-12 | 1 |
axon tract | 4.31e-12 | 1 |
intercerebral commissure | 4.31e-12 | 1 |
dorsal telencephalic commissure | 4.31e-12 | 1 |
brain white matter | 4.31e-12 | 1 |
brain commissure | 4.31e-12 | 1 |
white matter | 4.31e-12 | 1 |
nervous system commissure | 4.31e-12 | 1 |
cerebral hemisphere white matter | 4.31e-12 | 1 |
jaw skeleton | 5.70e-12 | 4 |
splanchnocranium | 5.70e-12 | 4 |
primary subdivision of cranial skeletal system | 9.28e-10 | 5 |
protuberance | 2.81e-08 | 6 |
pharyngeal arch | 2.81e-08 | 6 |
embryonic head | 2.81e-08 | 6 |
skeletal element | 5.88e-07 | 90 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 4.79e-17 | 31 |
leukemia | 2.00e-13 | 39 |
syndrome | 7.03e-13 | 1 |
hematologic cancer | 4.09e-10 | 51 |
immune system cancer | 4.09e-10 | 51 |
hematopoietic system disease | 4.56e-07 | 2 |