FFCP PHASE1:Hg19::chr11:615570..615721,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:615570..615721,-
|short_description=p2@IRF7
|description=CAGE_peak_2_at_IRF7_5end
|association_with_transcript=0bp_to_ENST00000348655,ENST00000469048,ENST...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3665 | |EntrezGene=3665 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6122 | |HGNC=6122 | ||
|TSSclassifier=strong | |||
|UniProt=E9PSE3 | |UniProt=E9PSE3 | ||
|association_with_transcript=0bp_to_ENST00000348655,ENST00000469048,ENST00000525445,ENST00000532096,uc001lqf.2,uc010qwf.1,uc010qwg.1_5end | |||
|cluster_id=chr11:615570..615721,- | |||
|coexpression_cluster_id=C413 | |||
|description=CAGE_peak_2_at_IRF7_5end | |||
|id=chr11:615570..615721,- | |||
|ontology_enrichment_celltype=CL:0000738!1.71e-23!140;CL:0002057!2.91e-22!42;CL:0002087!6.80e-20!119;CL:0000766!4.64e-19!76;CL:0002031!1.01e-18!124;CL:0000860!1.34e-18!45;CL:0002194!7.31e-15!63;CL:0000576!7.31e-15!63;CL:0000040!7.31e-15!63;CL:0000559!7.31e-15!63;CL:0002009!2.61e-14!65;CL:0000557!4.08e-14!71;CL:0000839!4.66e-14!70;CL:0000037!1.13e-13!172;CL:0000566!1.13e-13!172;CL:0000988!1.39e-13!182;CL:0002032!1.49e-12!165;CL:0000837!1.49e-12!165;CL:0000763!1.04e-07!112;CL:0000049!1.04e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.68e-20;33!CL:0002057;8.68e-20;33!CL:0000473;1.59e-15;39!CL:0000234;1.59e-15;39!CL:0000576;1.18e-14;48!CL:0000766;1.26e-11;69!CL:0002087;1.34e-09;104!CL:0000791;6.40e-07;18!CL:0000789;6.40e-07;18!CL:0002419;6.40e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.32e-30,136;CL:0002087,8.05e-27,115;CL:0000860,1.96e-25,42;CL:0002057,1.96e-25,42;CL:0002031,1.05e-24,120;CL:0000766,2.78e-24,72;CL:0000473,8.99e-24,48;CL:0000234,8.99e-24,48;CL:0000037,1.05e-19,168;CL:0002194,2.52e-19,59;CL:0000576,2.52e-19,59;CL:0000040,2.52e-19,59;CL:0000559,2.52e-19,59;CL:0000988,3.34e-19,177;CL:0000839,1.65e-18,66;CL:0002032,4.45e-18,161;CL:0000837,4.45e-18,161;CL:0002009,6.70e-18,61;CL:0000557,7.46e-18,67;CL:0000763,1.02e-10,108;CL:0000049,1.02e-10,108;CL:0000838,4.01e-08,52;CL:0000542,1.04e-07,53;CL:0000051,1.04e-07,53;CL:0000791,4.81e-07,18;CL:0000789,4.81e-07,18;CL:0002420,4.81e-07,18;CL:0002419,4.81e-07,18;CL:0000790,4.81e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002057;1.52e-18;42!CL:0000790;6.40e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!7.81e-17!112;UBERON:0002390!1.29e-16!102;UBERON:0003061!1.29e-16!102;UBERON:0002371!2.12e-12!80;UBERON:0001474!5.58e-10!86;UBERON:0002405!2.86e-09!115;UBERON:0003081!3.23e-09!216;UBERON:0004765!9.68e-09!101;UBERON:0001434!9.68e-09!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,7.37e-21,108;UBERON:0002390,1.13e-20,98;UBERON:0003061,1.13e-20,98;UBERON:0002405,1.79e-18,93;UBERON:0002371,1.96e-16,76;UBERON:0001474,6.18e-14,82;UBERON:0004765,4.51e-13,90;UBERON:0001434,1.69e-11,100;UBERON:0003081,3.11e-10,203 | |||
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| ||
|short_description=p2@IRF7 | |||
}} | }} |
Latest revision as of 16:51, 18 September 2015
Short description: | p2@IRF7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_IRF7_5end |
Coexpression cluster: | C413_CD14_Smooth_gall_mesothelioma_meningioma_Fibroblast_Neutrophils |
Association with transcript: | 0bp_to_ENST00000348655, ENST00000469048, ENST00000525445, ENST00000532096, uc001lqf.2, uc010qwf.1, uc010qwg.1_5end |
EntrezGene: | IRF7 |
HGNC: | 6122 |
UniProt: | E9PSE3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 7.37e-21 | 108 |
hematopoietic system | 1.13e-20 | 98 |
blood island | 1.13e-20 | 98 |
immune system | 1.79e-18 | 93 |
bone marrow | 1.96e-16 | 76 |
bone element | 6.18e-14 | 82 |
skeletal element | 4.51e-13 | 90 |
skeletal system | 1.69e-11 | 100 |
lateral plate mesoderm | 3.11e-10 | 203 |