FFCP PHASE1:Hg19::chr11:60720032..60720060,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:60720032..60720060,-
|short_description=p2@SLC15A3
|description=CAGE_peak_2_at_SLC15A3_5end
|association_with_transcript=-30bp_to_ENST00000538739_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51296 | |EntrezGene=51296 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18068 | |HGNC=18068 | ||
|TSSclassifier=strong | |||
|UniProt=F5GZ36 | |UniProt=F5GZ36 | ||
|association_with_transcript=-30bp_to_ENST00000538739_5end | |||
|cluster_id=chr11:60720032..60720060,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_2_at_SLC15A3_5end | |||
|id=chr11:60720032..60720060,- | |||
|ontology_enrichment_celltype=CL:0002057!1.94e-11!42;CL:0000766!8.28e-11!76;CL:0000860!8.74e-10!45;CL:0000048!8.78e-09!430;CL:0000723!1.50e-08!436;CL:0000738!6.60e-08!140;CL:0000034!7.97e-08!444;CL:0002320!1.46e-07!365;CL:0000134!3.16e-07!358;CL:0000839!8.86e-07!70 | |||
|ontology_enrichment_celltype_v019=CL:0000094;2.93e-10;8!CL:0000081;1.72e-08;11!CL:0002393;4.99e-08;6!CL:0002397;4.99e-08;6!CL:0000766;2.28e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.87e-13,72;CL:0000860,1.14e-10,42;CL:0002057,1.14e-10,42;CL:0000738,2.31e-10,136;CL:0000094,2.65e-10,8;CL:0000473,1.78e-09,48;CL:0000234,1.78e-09,48;CL:0000081,2.01e-08,11;CL:0002393,2.48e-08,9;CL:0002397,2.48e-08,9;CL:0000839,1.35e-07,66;CL:0000557,2.27e-07,67;CL:0000134,2.28e-07,354;CL:0002320,4.36e-07,361;CL:0002194,9.32e-07,59;CL:0000576,9.32e-07,59;CL:0000040,9.32e-07,59;CL:0000559,9.32e-07,59;CL:0002087,9.61e-07,115 | |||
|ontology_enrichment_development_v019=CL:0002057;4.36e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!1.01e-08!167;UBERON:0002193!2.11e-08!112;UBERON:0002384!5.68e-08!375;UBERON:0002390!8.25e-08!102;UBERON:0003061!8.25e-08!102 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.07e-09,98;UBERON:0003061,1.07e-09,98;UBERON:0002193,2.27e-08,108;UBERON:0002371,3.87e-08,76;UBERON:0002384,1.19e-07,371;UBERON:0001474,1.94e-07,82 | |||
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| ||
|short_description=p2@SLC15A3 | |||
}} | }} |
Latest revision as of 14:46, 18 September 2015
Short description: | p2@SLC15A3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SLC15A3_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -30bp_to_ENST00000538739_5end |
EntrezGene: | SLC15A3 |
HGNC: | 18068 |
UniProt: | F5GZ36 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 2.87e-13 | 72 |
classical monocyte | 1.14e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.14e-10 | 42 |
leukocyte | 2.31e-10 | 136 |
granulocyte | 2.65e-10 | 8 |
defensive cell | 1.78e-09 | 48 |
phagocyte | 1.78e-09 | 48 |
blood cell | 2.01e-08 | 11 |
intermediate monocyte | 2.48e-08 | 9 |
CD14-positive, CD16-positive monocyte | 2.48e-08 | 9 |
myeloid lineage restricted progenitor cell | 1.35e-07 | 66 |
granulocyte monocyte progenitor cell | 2.27e-07 | 67 |
mesenchymal cell | 2.28e-07 | 354 |
connective tissue cell | 4.36e-07 | 361 |
monopoietic cell | 9.32e-07 | 59 |
monocyte | 9.32e-07 | 59 |
monoblast | 9.32e-07 | 59 |
promonocyte | 9.32e-07 | 59 |
nongranular leukocyte | 9.61e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.07e-09 | 98 |
blood island | 1.07e-09 | 98 |
hemolymphoid system | 2.27e-08 | 108 |
bone marrow | 3.87e-08 | 76 |
connective tissue | 1.19e-07 | 371 |
bone element | 1.94e-07 | 82 |