FFCP PHASE1:Hg19::chr1:224022601..224022610,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:224022601..224022610,- | |||
|coexpression_cluster_id=C844 | |||
|description=CAGE_peak_at_chr1:224022601..224022610,- | |description=CAGE_peak_at_chr1:224022601..224022610,- | ||
|id=chr1:224022601..224022610,- | |id=chr1:224022601..224022610,- | ||
|ontology_enrichment_celltype=CL:0000839!3.17e-35!70;CL:0000557!1.12e-34!71;CL:0000766!3.79e-32!76;CL:0002057!3.37e-31!42;CL:0000860!6.48e-29!45;CL:0002194!2.02e-28!63;CL:0000576!2.02e-28!63;CL:0000040!2.02e-28!63;CL:0000559!2.02e-28!63;CL:0002009!1.91e-27!65;CL:0000738!2.22e-25!140;CL:0002031!1.47e-24!124;CL:0002087!3.10e-23!119;CL:0000763!1.53e-20!112;CL:0000049!1.53e-20!112;CL:0000988!3.87e-20!182;CL:0000037!9.27e-20!172;CL:0000566!9.27e-20!172;CL:0002032!2.58e-17!165;CL:0000837!2.58e-17!165;CL:0002274!3.45e-12!5;CL:0000457!3.45e-12!5;CL:0002191!3.45e-12!5;CL:0000097!3.45e-12!5;CL:0000831!3.45e-12!5;CL:0002028!3.45e-12!5;CL:0000840!8.54e-10!5;CL:0001029!8.54e-10!5;CL:0000080!1.06e-09!6;CL:0000842!6.05e-09!3;CL:0000810!1.07e-07!1;CL:0000895!1.07e-07!1;CL:0002436!1.07e-07!1;CL:0002427!1.07e-07!1;CL:0002428!1.07e-07!1;CL:0002429!1.07e-07!1;CL:0002433!1.07e-07!1;CL:0002431!1.07e-07!1;CL:0002432!1.07e-07!1;CL:0000134!1.10e-07!358;CL:0002601!1.15e-07!1;CL:0002320!1.95e-07!365;CL:0000048!5.47e-07!430;CL:0000163!5.70e-07!9;CL:0000224!6.46e-07!4;CL:0000723!8.14e-07!436 | |ontology_enrichment_celltype=CL:0000839!3.17e-35!70;CL:0000557!1.12e-34!71;CL:0000766!3.79e-32!76;CL:0002057!3.37e-31!42;CL:0000860!6.48e-29!45;CL:0002194!2.02e-28!63;CL:0000576!2.02e-28!63;CL:0000040!2.02e-28!63;CL:0000559!2.02e-28!63;CL:0002009!1.91e-27!65;CL:0000738!2.22e-25!140;CL:0002031!1.47e-24!124;CL:0002087!3.10e-23!119;CL:0000763!1.53e-20!112;CL:0000049!1.53e-20!112;CL:0000988!3.87e-20!182;CL:0000037!9.27e-20!172;CL:0000566!9.27e-20!172;CL:0002032!2.58e-17!165;CL:0000837!2.58e-17!165;CL:0002274!3.45e-12!5;CL:0000457!3.45e-12!5;CL:0002191!3.45e-12!5;CL:0000097!3.45e-12!5;CL:0000831!3.45e-12!5;CL:0002028!3.45e-12!5;CL:0000840!8.54e-10!5;CL:0001029!8.54e-10!5;CL:0000080!1.06e-09!6;CL:0000842!6.05e-09!3;CL:0000810!1.07e-07!1;CL:0000895!1.07e-07!1;CL:0002436!1.07e-07!1;CL:0002427!1.07e-07!1;CL:0002428!1.07e-07!1;CL:0002429!1.07e-07!1;CL:0002433!1.07e-07!1;CL:0002431!1.07e-07!1;CL:0002432!1.07e-07!1;CL:0000134!1.10e-07!358;CL:0002601!1.15e-07!1;CL:0002320!1.95e-07!365;CL:0000048!5.47e-07!430;CL:0000163!5.70e-07!9;CL:0000224!6.46e-07!4;CL:0000723!8.14e-07!436 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.44e-39;33!CL:0002057;5.44e-39;33!CL:0000473;5.29e-28;39!CL:0000234;5.29e-28;39!CL:0000766;8.99e-17;69!CL:0000576;5.63e-16;48!CL:0002087;3.79e-09;104!CL:0000763;2.45e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.71e-33,42;CL:0002057,3.71e-33,42;CL:0000473,5.15e-29,48;CL:0000234,5.15e-29,48;CL:0000839,2.43e-26,66;CL:0000557,5.95e-26,67;CL:0000766,3.60e-24,72;CL:0002194,3.31e-23,59;CL:0000576,3.31e-23,59;CL:0000040,3.31e-23,59;CL:0000559,3.31e-23,59;CL:0002009,1.86e-22,61;CL:0000763,3.81e-16,108;CL:0000049,3.81e-16,108;CL:0002031,1.59e-14,120;CL:0000738,8.37e-13,136;CL:0002087,6.21e-12,115;CL:0002032,8.68e-11,161;CL:0000837,8.68e-11,161;CL:0000037,2.50e-10,168;CL:0000988,8.62e-10,177 | |||
|ontology_enrichment_development_v019=CL:0002057;4.03e-21;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.52e-33!102;UBERON:0003061!1.52e-33!102;UBERON:0002371!2.38e-30!80;UBERON:0002193!3.78e-30!112;UBERON:0001474!5.81e-28!86;UBERON:0004765!3.21e-23!101;UBERON:0001434!3.21e-23!101;UBERON:0002405!4.28e-22!115;UBERON:0002204!2.06e-15!167;UBERON:0003081!1.00e-14!216;UBERON:0002336!3.17e-07!1;UBERON:0001018!3.17e-07!1;UBERON:0002473!3.17e-07!1;UBERON:0005340!3.17e-07!1;UBERON:0002316!3.17e-07!1;UBERON:0003544!3.17e-07!1;UBERON:0001020!3.17e-07!1;UBERON:0005970!3.17e-07!1;UBERON:0002437!3.17e-07!1;UBERON:0002384!4.25e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.54e-23,76;UBERON:0001474,3.01e-21,82;UBERON:0004765,2.27e-19,90;UBERON:0002405,9.53e-19,93;UBERON:0002390,8.57e-18,98;UBERON:0003061,8.57e-18,98;UBERON:0001434,1.94e-17,100;UBERON:0002193,3.81e-16,108;UBERON:0002204,2.16e-10,167;UBERON:0003081,1.68e-08,203 | |||
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|short_description=p@chr1:224022601..224022610,- | |short_description=p@chr1:224022601..224022610,- | ||
}} | }} |
Latest revision as of 04:23, 28 July 2015
Short description: | p@chr1:224022601..224022610, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:224022601..224022610, - |
Coexpression cluster: | C844_Mast_CD14_immature_Eosinophils_carcinoid_Natural_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.71e-33 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.71e-33 | 42 |
defensive cell | 5.15e-29 | 48 |
phagocyte | 5.15e-29 | 48 |
myeloid lineage restricted progenitor cell | 2.43e-26 | 66 |
granulocyte monocyte progenitor cell | 5.95e-26 | 67 |
myeloid leukocyte | 3.60e-24 | 72 |
monopoietic cell | 3.31e-23 | 59 |
monocyte | 3.31e-23 | 59 |
monoblast | 3.31e-23 | 59 |
promonocyte | 3.31e-23 | 59 |
macrophage dendritic cell progenitor | 1.86e-22 | 61 |
myeloid cell | 3.81e-16 | 108 |
common myeloid progenitor | 3.81e-16 | 108 |
hematopoietic lineage restricted progenitor cell | 1.59e-14 | 120 |
leukocyte | 8.37e-13 | 136 |
nongranular leukocyte | 6.21e-12 | 115 |
hematopoietic oligopotent progenitor cell | 8.68e-11 | 161 |
hematopoietic multipotent progenitor cell | 8.68e-11 | 161 |
hematopoietic stem cell | 2.50e-10 | 168 |
hematopoietic cell | 8.62e-10 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.54e-23 | 76 |
bone element | 3.01e-21 | 82 |
skeletal element | 2.27e-19 | 90 |
immune system | 9.53e-19 | 93 |
hematopoietic system | 8.57e-18 | 98 |
blood island | 8.57e-18 | 98 |
skeletal system | 1.94e-17 | 100 |
hemolymphoid system | 3.81e-16 | 108 |
musculoskeletal system | 2.16e-10 | 167 |
lateral plate mesoderm | 1.68e-08 | 203 |