FFCP PHASE1:Hg19::chr1:219980111..219980117,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:219980111..219980117,- | |||
|coexpression_cluster_id=C221 | |||
|description=CAGE_peak_at_chr1:219980111..219980117,- | |description=CAGE_peak_at_chr1:219980111..219980117,- | ||
|id=chr1:219980111..219980117,- | |id=chr1:219980111..219980117,- | ||
|ontology_enrichment_celltype=CL:0002582!1.44e-20!3;CL:0002573!4.02e-10!2;CL:0000064!1.64e-09!3;CL:0005012!1.64e-09!3;CL:0000067!1.64e-09!3;CL:0002304!1.64e-09!3;CL:0002563!1.49e-07!4 | |ontology_enrichment_celltype=CL:0002582!1.44e-20!3;CL:0002573!4.02e-10!2;CL:0000064!1.64e-09!3;CL:0005012!1.64e-09!3;CL:0000067!1.64e-09!3;CL:0002304!1.64e-09!3;CL:0002563!1.49e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0002573;4.28e-53;2!CL:0002253;3.81e-21;2!CL:0000322;1.22e-14;3!CL:0002563;2.80e-11;4!CL:0000243;2.52e-10;15!CL:0000125;2.52e-10;15!CL:0000095;2.41e-09;17!CL:0002319;7.34e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002573,3.75e-53,2;CL:0002253,3.81e-21,2;CL:0000322,1.22e-14,3;CL:0002563,2.80e-11,4;CL:0000243,2.46e-10,15;CL:0000125,2.46e-10,15;CL:0000030,2.46e-10,15;CL:0000339,2.46e-10,15;CL:0000095,2.36e-09,17;CL:0000123,2.36e-09,17;CL:0002319,7.24e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000339;2.52e-10;15 | |||
|ontology_enrichment_disease=DOID:3119!1.18e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:3910;3.11e-21;2!DOID:3908;2.53e-09;5!DOID:1325;5.08e-07;7!DOID:3904;5.08e-07;7 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,3.11e-21,2;DOID:3908,2.53e-09,5;DOID:1325,5.08e-07,7;DOID:3904,5.08e-07,7 | |||
|ontology_enrichment_uberon=UBERON:0002394!1.09e-14!4;UBERON:0003928!1.09e-14!4;UBERON:0001778!1.64e-09!3;UBERON:0001775!1.64e-09!3;UBERON:0002294!1.29e-08!7;UBERON:0001173!1.29e-08!7;UBERON:0004912!1.29e-08!7;UBERON:0004913!1.04e-07!1;UBERON:0003703!1.04e-07!1;UBERON:0001174!1.04e-07!1;UBERON:0004914!1.04e-07!1;UBERON:0001282!1.44e-07!1;UBERON:0009842!1.44e-07!1;UBERON:0003704!1.44e-07!1;UBERON:0001171!1.44e-07!1;UBERON:0001172!1.44e-07!1;UBERON:0001242!1.49e-07!4;UBERON:0001262!1.49e-07!4;UBERON:0004786!1.49e-07!4;UBERON:0004808!1.49e-07!4;UBERON:0001277!1.49e-07!4;UBERON:0002363!1.99e-07!1;UBERON:0007647!1.99e-07!1;UBERON:0010115!1.99e-07!1;UBERON:0000488!2.42e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;3.11e-21;2!UBERON:0002173;3.11e-21;2!UBERON:0002186;3.11e-21;2!UBERON:0000010;1.54e-18;8!UBERON:0004821;1.22e-14;3!UBERON:0007499;1.22e-14;3!UBERON:0003215;1.22e-14;3!UBERON:0010368;1.22e-14;3!UBERON:0009911;1.22e-14;3!UBERON:0002299;1.22e-14;3!UBERON:0006524;1.22e-14;3!UBERON:0008874;1.22e-14;3!UBERON:0002169;1.22e-14;3!UBERON:0004894;1.22e-14;3!UBERON:0009856;2.53e-11;4!UBERON:0001052;2.80e-11;4!UBERON:0001242;2.80e-11;4!UBERON:0001262;2.80e-11;4!UBERON:0004786;2.80e-11;4!UBERON:0004808;2.80e-11;4!UBERON:0001277;2.80e-11;4!UBERON:0004907;2.74e-09;5!UBERON:0000485;5.38e-07;7!UBERON:0003929;5.38e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,3.11e-21,2;UBERON:0002173,3.11e-21,2;UBERON:0002186,3.11e-21,2;UBERON:0000010,1.48e-18,8;UBERON:0004821,1.22e-14,3;UBERON:0003215,1.22e-14,3;UBERON:0010368,1.22e-14,3;UBERON:0009911,1.22e-14,3;UBERON:0002299,1.22e-14,3;UBERON:0006524,1.22e-14,3;UBERON:0008874,1.22e-14,3;UBERON:0002169,1.22e-14,3;UBERON:0004894,1.22e-14,3;UBERON:0001052,2.80e-11,4;UBERON:0001242,2.80e-11,4;UBERON:0001262,2.80e-11,4;UBERON:0004786,2.80e-11,4;UBERON:0004808,2.80e-11,4;UBERON:0001277,2.80e-11,4;UBERON:0004907,2.74e-09,5 | |||
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|short_description=p@chr1:219980111..219980117,- | |short_description=p@chr1:219980111..219980117,- | ||
}} | }} |
Latest revision as of 04:03, 28 July 2015
Short description: | p@chr1:219980111..219980117, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:219980111..219980117, - |
Coexpression cluster: | C221_alveolar_Osteoblast_Myoblast_mesenchymal_liposarcoma_Smooth_hepatocellular |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Schwann cell | 3.75e-53 | 2 |
epithelial cell of large intestine | 3.81e-21 | 2 |
pneumocyte | 1.22e-14 | 3 |
intestinal epithelial cell | 2.80e-11 | 4 |
glial cell (sensu Vertebrata) | 2.46e-10 | 15 |
glial cell | 2.46e-10 | 15 |
glioblast | 2.46e-10 | 15 |
glioblast (sensu Vertebrata) | 2.46e-10 | 15 |
neuron associated cell | 2.36e-09 | 17 |
neuron associated cell (sensu Vertebrata) | 2.36e-09 | 17 |
neural cell | 7.24e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 3.11e-21 | 2 |
alveolar duct | 3.11e-21 | 2 |
bronchiole | 3.11e-21 | 2 |
peripheral nervous system | 1.48e-18 | 8 |
pulmonary alveolus epithelium | 1.22e-14 | 3 |
alveolus | 1.22e-14 | 3 |
pulmonary lobule | 1.22e-14 | 3 |
lobule | 1.22e-14 | 3 |
alveolus of lung | 1.22e-14 | 3 |
alveolar system | 1.22e-14 | 3 |
pulmonary acinus | 1.22e-14 | 3 |
alveolar sac | 1.22e-14 | 3 |
alveolar wall | 1.22e-14 | 3 |
rectum | 2.80e-11 | 4 |
intestinal mucosa | 2.80e-11 | 4 |
wall of intestine | 2.80e-11 | 4 |
gastrointestinal system mucosa | 2.80e-11 | 4 |
gastrointestinal system epithelium | 2.80e-11 | 4 |
intestinal epithelium | 2.80e-11 | 4 |
lower digestive tract | 2.74e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 3.11e-21 | 2 |
non-small cell lung carcinoma | 2.53e-09 | 5 |
bronchus cancer | 5.08e-07 | 7 |
bronchogenic carcinoma | 5.08e-07 | 7 |