FFCP PHASE1:Hg19::chr1:209792178..209792193,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3914 | |EntrezGene=3914 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6490 | |HGNC=6490 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-35bp_to_ENST00000455193_5end | |association_with_transcript=-35bp_to_ENST00000455193_5end | ||
|cluster_id=chr1:209792178..209792193,- | |||
|description=CAGE_peak_12_at_LAMB3_5end | |description=CAGE_peak_12_at_LAMB3_5end | ||
|id=chr1:209792178..209792193,- | |id=chr1:209792178..209792193,- | ||
|ontology_enrichment_celltype=CL:0000840!5.73e-07!5;CL:0001029!5.73e-07!5 | |ontology_enrichment_celltype=CL:0000840!5.73e-07!5;CL:0001029!5.73e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000840;5.54e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000840,5.54e-08,5;CL:0001029,5.54e-08,5 | |||
|ontology_enrichment_development_v019=UBERON:0010227;1.48e-40;1 | |||
|ontology_enrichment_disease=DOID:171!1.67e-10!10 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001869!5.53e-42!32;UBERON:0001893!2.59e-39!34;UBERON:0002619!1.78e-38!22;UBERON:0000956!2.42e-38!25;UBERON:0000203!2.42e-38!25;UBERON:0001950!5.43e-37!20;UBERON:0002791!2.72e-36!33;UBERON:0002780!1.53e-35!41;UBERON:0001890!1.53e-35!41;UBERON:0006240!1.53e-35!41;UBERON:0002020!3.97e-35!34;UBERON:0003528!3.97e-35!34;UBERON:0003080!1.34e-34!42;UBERON:0002346!1.09e-29!90;UBERON:0001017!3.62e-27!82;UBERON:0001049!6.30e-27!57;UBERON:0005068!6.30e-27!57;UBERON:0006241!6.30e-27!57;UBERON:0007135!6.30e-27!57;UBERON:0002616!7.41e-26!59;UBERON:0005743!1.21e-25!86;UBERON:0000955!1.44e-25!69;UBERON:0006238!1.44e-25!69;UBERON:0000200!3.99e-25!6;UBERON:0000073!1.17e-24!94;UBERON:0001016!1.17e-24!94;UBERON:0003056!1.79e-22!61;UBERON:0003075!5.69e-22!86;UBERON:0007284!5.69e-22!86;UBERON:0007023!2.22e-18!115;UBERON:0000924!3.48e-18!173;UBERON:0006601!3.48e-18!173;UBERON:0000033!7.83e-15!123;UBERON:0000153!6.98e-14!129;UBERON:0007811!6.98e-14!129;UBERON:0004121!2.12e-13!169;UBERON:0002771!4.52e-13!3;UBERON:0001871!5.11e-13!7;UBERON:0002081!5.20e-10!2;UBERON:0001870!5.44e-10!2;UBERON:0002360!5.34e-09!2;UBERON:0000094!5.34e-09!2;UBERON:0007645!5.34e-09!2;UBERON:0002021!2.09e-08!5;UBERON:0001872!2.75e-08!5;UBERON:0000349!4.96e-08!5;UBERON:0004151!6.29e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002079;1.48e-40;1!UBERON:0002081;4.66e-21;2!UBERON:0004151;1.60e-14;3!UBERON:0002346;2.80e-11;4!UBERON:0000923;2.80e-11;4!UBERON:0010316;2.80e-11;4!UBERON:0005291;2.80e-11;4!UBERON:0002050;2.74e-09;5!UBERON:0005423;2.74e-09;5!UBERON:0001871;6.21e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002079,1.48e-40,1;UBERON:0002081,4.66e-21,2;UBERON:0010227,4.66e-21,2;UBERON:0004151,1.60e-14,3;UBERON:0001871,6.39e-07,6 | |||
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| ||
|short_description=p12@LAMB3 | |short_description=p12@LAMB3 | ||
}} | }} |
Latest revision as of 19:23, 24 September 2015
Short description: | p12@LAMB3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_LAMB3_5end |
Coexpression cluster: | NA |
Association with transcript: | -35bp_to_ENST00000455193_5end |
EntrezGene: | LAMB3 |
HGNC: | 6490 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
immature conventional dendritic cell | 5.54e-08 | 5 |
common dendritic progenitor | 5.54e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
left cardiac atrium | 1.48e-40 | 1 |
cardiac atrium | 4.66e-21 | 2 |
future cardiac atrium | 4.66e-21 | 2 |
cardiac chamber | 1.60e-14 | 3 |
temporal lobe | 6.39e-07 | 6 |