FFCP PHASE1:Hg19::chr15:72523217..72523239,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5315 | |EntrezGene=5315 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9021 | |HGNC=9021 | ||
|TSSclassifier=strong | |||
|UniProt=P14618 | |UniProt=P14618 | ||
|association_with_transcript=214bp_to_AK294315_5end | |association_with_transcript=214bp_to_AK294315_5end | ||
|cluster_id=chr15:72523217..72523239,- | |||
|description=CAGE_peak_14_at_PKM2_5end | |description=CAGE_peak_14_at_PKM2_5end | ||
|id=chr15:72523217..72523239,- | |id=chr15:72523217..72523239,- | ||
|ontology_enrichment_celltype=CL:0000860!1.06e-20!45;CL:0002057!2.26e-19!42;CL:0000839!3.94e-14!70;CL:0000557!6.00e-14!71;CL:0000766!1.29e-13!76;CL:0002194!3.40e-13!63;CL:0000576!3.40e-13!63;CL:0000040!3.40e-13!63;CL:0000559!3.40e-13!63;CL:0002009!4.88e-13!65;CL:0000738!5.67e-13!140;CL:0000763!4.97e-12!112;CL:0000049!4.97e-12!112;CL:0002031!9.12e-12!124;CL:0000037!1.26e-11!172;CL:0000566!1.26e-11!172;CL:0002087!1.62e-11!119;CL:0000988!3.06e-11!182;CL:0002032!4.07e-11!165;CL:0000837!4.07e-11!165 | |ontology_enrichment_celltype=CL:0000860!1.06e-20!45;CL:0002057!2.26e-19!42;CL:0000839!3.94e-14!70;CL:0000557!6.00e-14!71;CL:0000766!1.29e-13!76;CL:0002194!3.40e-13!63;CL:0000576!3.40e-13!63;CL:0000040!3.40e-13!63;CL:0000559!3.40e-13!63;CL:0002009!4.88e-13!65;CL:0000738!5.67e-13!140;CL:0000763!4.97e-12!112;CL:0000049!4.97e-12!112;CL:0002031!9.12e-12!124;CL:0000037!1.26e-11!172;CL:0000566!1.26e-11!172;CL:0002087!1.62e-11!119;CL:0000988!3.06e-11!182;CL:0002032!4.07e-11!165;CL:0000837!4.07e-11!165 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.17e-61;33!CL:0002057;2.17e-61;33!CL:0000473;5.16e-41;39!CL:0000234;5.16e-41;39!CL:0000576;1.27e-31;48!CL:0000766;8.29e-19;69!CL:0002087;9.42e-11;104!CL:0000775;1.34e-10;3!CL:0000763;3.90e-10;100!CL:0000738;6.29e-08;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.14e-59,42;CL:0002057,4.14e-59,42;CL:0000473,1.06e-50,48;CL:0000234,1.06e-50,48;CL:0000766,9.99e-41,72;CL:0002194,6.15e-39,59;CL:0000576,6.15e-39,59;CL:0000040,6.15e-39,59;CL:0000559,6.15e-39,59;CL:0002009,2.02e-37,61;CL:0000839,1.77e-36,66;CL:0000557,8.06e-36,67;CL:0000738,3.29e-28,136;CL:0000763,4.16e-26,108;CL:0000049,4.16e-26,108;CL:0002087,1.28e-25,115;CL:0002031,1.87e-22,120;CL:0000037,2.75e-22,168;CL:0000988,6.57e-22,177;CL:0002032,1.67e-19,161;CL:0000837,1.67e-19,161;CL:0000775,1.22e-10,3;CL:0000134,1.60e-09,354;CL:0002320,4.01e-09,361;CL:0000219,2.51e-08,386;CL:0000048,3.89e-07,427;CL:0000723,6.97e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;8.98e-43;42!CL:0000049;5.13e-09;108 | |||
|ontology_enrichment_disease=DOID:0050687!2.94e-07!143;DOID:14566!4.86e-07!239;DOID:162!9.41e-07!235 | |ontology_enrichment_disease=DOID:0050687!2.94e-07!143;DOID:14566!4.86e-07!239;DOID:162!9.41e-07!235 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.92e-12!80;UBERON:0001474!2.37e-11!86;UBERON:0002390!2.96e-11!102;UBERON:0003061!2.96e-11!102;UBERON:0004765!8.21e-11!101;UBERON:0001434!8.21e-11!101;UBERON:0002193!1.24e-08!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.78e-33,76;UBERON:0001474,7.49e-30,82;UBERON:0002390,2.21e-27,98;UBERON:0003061,2.21e-27,98;UBERON:0004765,1.72e-26,90;UBERON:0002405,2.23e-25,93;UBERON:0002193,4.62e-24,108;UBERON:0001434,4.81e-23,100;UBERON:0003081,2.42e-12,203;UBERON:0002204,1.18e-11,167;UBERON:0002384,1.39e-08,371 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0.313454721478088,0,0.684372125364421,0.627713197974014,2.44522898393444,0.903106483949403,0.865818594450472,0,0,0,0.919421224478927,0,0,0.852139206383318,0.426507697462265,0,1.10799081706375,3.20871115952227,0.868043482863407,0.447830948479849,0.647787332037959,0.257575567634187,2.18097358169347,2.64513160582167,2.18325655069035,5.11343881192506,6.16751832032739,2.47765096716083,3.45230870786581,1.2808035326455,1.41889337933151,2.41321976515633,0.645484683583826,2.70852973188684,4.1413314699373,5.18521685109907,0.898893937780338,3.67300670845083,1.60464513538047,1.91801137739712,1.31940520074686,1.99463657621632,1.70489900213078,2.32167390902867,1.70215567407342,3.11411124497787,3.76872997885115,3.12889751052121,1.08594422352558,4.23779651843358,3.31449872388808,0.949387162322653,0,0.425208599930087,0,0.112328631146495,0.450530678524519,0.48217676009124,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0.569212969109448,0.587237189370939,0,0,0,0,0.786839080455332,0,0.205601498999509,0.167186495390678,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0,0.164437904603676,0,0,0.14828656316206,0.267540828089713,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0.802320587350522,0.434473211648397,0,0,0,0.361439152384566,0,0.434539556882471,0,0,0.378139268656271,0.221729397462564,0.263504357079378,0.196468613246569,0,0,0,0,0.531831842075461,0,0,0,0.39752481473341,0,0,0.56530794192401,0.419499436209906,0.550236083880135,0.417989933073621,0.258416759169329,0,0,0.402829317109147,0,0,0,0,0.0892997282840798,0.22452937262617,0,0,0,0,0,0,0,0,0,1.05927344650575,0.860509862246441,0.709336764396714,0.560677600142307,0,0,0,0.134710672069688,0.326923806226917,0,0.576175924479999,0,0,0,0.298897361103602,0.469737994575059,0.323745888736263,1.26405726032024,0,0.61417158655884,0.309977343527296,0,0,0,0,0,0.250237039743928,0,0.438977620880838,0.30648779579902,0.45071417671979,0,0.538168907066586,0.427114777637135,0,0.600182192168805,0.309157587715317,1.54584324027377,0.18611685633159,0.168776332241266,0.0974370051611986,0.504867548488229,0,0.323292113637624,0,0.403008392910561,0,0,0.272746120590835,0,0.365921118388786,0,0.116193942869518,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0.591534000199219,0,0,0.441175890929576,0,0.237270619111097,0.269662616320329,0.196221465125346,0,0,0,0,0,0,0,0,3.09024169590255,0.245976877086227,0,0.109750285408626,0,0.100528972411631,0,0,0,0,0,0,0,0,0,1.58040879591855,0,0,0.234004265139238,0.297262324577456,0,0.16798212819886,0.141775097242386,0,0,0.383382679165211,0.492663237895943,0.528290604079356,1.03664057770386,0.432359860250884,0.25248486685276,0.063497894292169,0,1.17217447210047,0,0.308482478109971,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0.823240336780769,0.325736184293735,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,1.14861935834114,0,0.434343920002738,0.821905290201534,0.358121926479791,0.448340575974109,0.197030760201927,1.72502059887614,0.513372145118994,0.254094624222463,0,0.773288812777695,0,0,2.99602809578873,5.9832291840805,1.24324654030811,0,0,0,0.623912584592421,0.713715955188647,0,0,0.601892199455438,0,0,0.664225598535437,0,0.0868836144680828,0,0,0.413536052245775,1.94142780736755,1.38745825144478,0,0,0.30239029332968,0,0,0,0.128139149255701,0,0.160853921143607,0,0.154209693802656,0.177561725313127,0,0,0.116210378459959,0.241718899183244,1.40354529212299,0.0920809889358963,0.34444334449382,0.182091168006717,0.262248829918848,0,0,0,0,0.105551628892876,0,0,0.215915916102139,1.54227252690289,0.270946437543853,0,0.254876273045038,0,0,0.219259876645935,0,0,0,0,0.206082023295445,0.0915694648183434,0.165018999841176,0,0,0,0.193341436584244,0,0.15350367472613,0.413509717453592,0.429680979473094,0.435050081742686,0.0852266274161009,0,0,0.960950336825531,1.14851441245126,0.6069466851333,0,0.62962469366128,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0.359744915166629,0.274537029736055,0.471249609382746,0,0,0.421258456238981,0,0,2.11300293513511,0.136499911407986,0.282810863907425,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0.422215270595328,0.658589785919804,0,0,0.0962221127255121,0,1.08890984861323,0.0941438007767792,0.43050537267123,0,0,0,0,0.764637207142375,0,0.238231775457789,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0.213425530045242,1.4348364545594,0,0.383010740264733,0.423347165447766,0,0.280797178113459,0.228234679033192,0.783399478865116,0,0.169291777801603,0.1605880751037,0.201799707191048,0.425846237690326,1.71752672377882,0,0,0,0.19538809540204,0.278406173895242,0,0,0.66614393599564,0,0,0,0.121360521749513,0.780103689942349,0.284136146806413,0,0,0,0,0,0.333926115068718,0.329607748453519,1.05562704063997,0.19924798825107,0,0.755798243562828,0.409074730008619,0.492339221844278,0,0.359473404589307,0.179021174675609,0,0.493217028184668,0,0,0,0.185536196323703,0,0.260427761085233,0,0,0.1137934482855,0,0,0.689486746482929,0.291604613383254,0.520874984799877,0,0.361789315876224,0,0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| ||
|short_description=p14@PKM2 | |short_description=p14@PKM2 | ||
}} | }} |
Latest revision as of 22:39, 18 September 2015
Short description: | p14@PKM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_PKM2_5end |
Coexpression cluster: | NA |
Association with transcript: | 214bp_to_AK294315_5end |
EntrezGene: | PKM2 |
HGNC: | 9021 |
UniProt: | P14618 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.14e-59 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.14e-59 | 42 |
defensive cell | 1.06e-50 | 48 |
phagocyte | 1.06e-50 | 48 |
myeloid leukocyte | 9.99e-41 | 72 |
monopoietic cell | 6.15e-39 | 59 |
monocyte | 6.15e-39 | 59 |
monoblast | 6.15e-39 | 59 |
promonocyte | 6.15e-39 | 59 |
macrophage dendritic cell progenitor | 2.02e-37 | 61 |
myeloid lineage restricted progenitor cell | 1.77e-36 | 66 |
granulocyte monocyte progenitor cell | 8.06e-36 | 67 |
leukocyte | 3.29e-28 | 136 |
myeloid cell | 4.16e-26 | 108 |
common myeloid progenitor | 4.16e-26 | 108 |
nongranular leukocyte | 1.28e-25 | 115 |
hematopoietic lineage restricted progenitor cell | 1.87e-22 | 120 |
hematopoietic stem cell | 2.75e-22 | 168 |
hematopoietic cell | 6.57e-22 | 177 |
hematopoietic oligopotent progenitor cell | 1.67e-19 | 161 |
hematopoietic multipotent progenitor cell | 1.67e-19 | 161 |
neutrophil | 1.22e-10 | 3 |
mesenchymal cell | 1.60e-09 | 354 |
connective tissue cell | 4.01e-09 | 361 |
motile cell | 2.51e-08 | 386 |
multi fate stem cell | 3.89e-07 | 427 |
somatic stem cell | 6.97e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.78e-33 | 76 |
bone element | 7.49e-30 | 82 |
hematopoietic system | 2.21e-27 | 98 |
blood island | 2.21e-27 | 98 |
skeletal element | 1.72e-26 | 90 |
immune system | 2.23e-25 | 93 |
hemolymphoid system | 4.62e-24 | 108 |
skeletal system | 4.81e-23 | 100 |
lateral plate mesoderm | 2.42e-12 | 203 |
musculoskeletal system | 1.18e-11 | 167 |
connective tissue | 1.39e-08 | 371 |