FFCP PHASE1:Hg19::chr1:203734279..203734288,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54900 | |EntrezGene=54900 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26005 | |HGNC=26005 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IWV1 | |UniProt=Q8IWV1 | ||
|association_with_transcript=0bp_to_NM_001136190,NM_017773,uc001haa.2,uc010pql.1_5end | |association_with_transcript=0bp_to_NM_001136190,NM_017773,uc001haa.2,uc010pql.1_5end | ||
|cluster_id=chr1:203734279..203734288,+ | |||
|coexpression_cluster_id=C12 | |||
|description=CAGE_peak_3_at_LAX1_5end | |description=CAGE_peak_3_at_LAX1_5end | ||
|id=chr1:203734279..203734288,+ | |id=chr1:203734279..203734288,+ | ||
|ontology_enrichment_celltype=CL:0000542!1.11e-53!53;CL:0000051!1.11e-53!53;CL:0000838!8.29e-52!52;CL:0000084!7.07e-30!25;CL:0000827!7.07e-30!25;CL:0000738!2.87e-28!140;CL:0002031!4.22e-25!124;CL:0000791!1.84e-24!18;CL:0000789!1.84e-24!18;CL:0002420!1.84e-24!18;CL:0002419!1.84e-24!18;CL:0000790!1.84e-24!18;CL:0002087!2.03e-24!119;CL:0000037!1.21e-23!172;CL:0000566!1.21e-23!172;CL:0000988!1.61e-21!182;CL:0002032!9.37e-21!165;CL:0000837!9.37e-21!165;CL:0000945!3.56e-18!24;CL:0000826!3.56e-18!24;CL:0000625!5.70e-15!11;CL:0000236!3.45e-13!14;CL:0002274!7.11e-13!5;CL:0000457!7.11e-13!5;CL:0002191!7.11e-13!5;CL:0000097!7.11e-13!5;CL:0000831!7.11e-13!5;CL:0002028!7.11e-13!5;CL:0000624!2.47e-09!6;CL:0000623!6.89e-07!3;CL:0000825!6.89e-07!3;CL:0000163!7.17e-07!9 | |ontology_enrichment_celltype=CL:0000542!1.11e-53!53;CL:0000051!1.11e-53!53;CL:0000838!8.29e-52!52;CL:0000084!7.07e-30!25;CL:0000827!7.07e-30!25;CL:0000738!2.87e-28!140;CL:0002031!4.22e-25!124;CL:0000791!1.84e-24!18;CL:0000789!1.84e-24!18;CL:0002420!1.84e-24!18;CL:0002419!1.84e-24!18;CL:0000790!1.84e-24!18;CL:0002087!2.03e-24!119;CL:0000037!1.21e-23!172;CL:0000566!1.21e-23!172;CL:0000988!1.61e-21!182;CL:0002032!9.37e-21!165;CL:0000837!9.37e-21!165;CL:0000945!3.56e-18!24;CL:0000826!3.56e-18!24;CL:0000625!5.70e-15!11;CL:0000236!3.45e-13!14;CL:0002274!7.11e-13!5;CL:0000457!7.11e-13!5;CL:0002191!7.11e-13!5;CL:0000097!7.11e-13!5;CL:0000831!7.11e-13!5;CL:0002028!7.11e-13!5;CL:0000624!2.47e-09!6;CL:0000623!6.89e-07!3;CL:0000825!6.89e-07!3;CL:0000163!7.17e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000097;4.85e-29;5!CL:0000791;6.75e-18;18!CL:0000789;6.75e-18;18!CL:0002419;6.75e-18;18!CL:0000163;4.86e-16;9!CL:0000084;7.34e-16;25!CL:0000625;5.93e-12;11!CL:0000542;4.37e-11;53!CL:0000624;9.78e-09;6!CL:0000898;2.68e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,4.63e-29,5;CL:0002028,4.63e-29,5;CL:0000791,4.32e-18,18;CL:0000789,4.32e-18,18;CL:0002420,4.32e-18,18;CL:0002419,4.32e-18,18;CL:0000790,4.32e-18,18;CL:0000542,7.02e-17,53;CL:0000051,7.02e-17,53;CL:0000163,4.74e-16,9;CL:0000084,6.37e-16,25;CL:0000827,6.37e-16,25;CL:0000838,8.02e-15,52;CL:0000625,3.57e-12,11;CL:0002031,8.90e-11,120;CL:0000738,2.88e-10,136;CL:0000624,1.03e-08,6;CL:0000898,3.67e-08,3;CL:0002032,4.55e-08,161;CL:0000837,4.55e-08,161;CL:0000037,1.43e-07,168;CL:0000988,5.42e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000790;6.75e-18;18!CL:0000051;4.37e-11;53 | |||
|ontology_enrichment_disease=DOID:2531!2.71e-07!51;DOID:0060083!2.71e-07!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!3.00e-10!7;UBERON:0002370!4.69e-09!4;UBERON:0005058!4.69e-09!4;UBERON:0009113!4.69e-09!4;UBERON:0003295!4.69e-09!4;UBERON:0005562!4.69e-09!4 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,9.79e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0.154816123316076,0,0,0,0.309868802321207,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,1.77901850772711,0.426730222566507,0.400395987036012,0,0,0.954053754535364,1.70763890732835,1.17447437874188,0.382273228125229,0,0,0,1.57367816091066,0.393010762749165,0.616804496998528,3.8452893939856,2.28145586643513,2.36723902867367,0,1.55974639639243,0,1.55073726208535,2.16643091012012,2.5618263945135,3.77172107923647,2.13769275984779,1.38175008892924,1.15921234294021,1.33457906845854,1.33770414044857,1.04535523804977,1.13309342697566,1.14966148080576,0.34362744548263,0.506039384039006,1.59282707162048,0.651083453856419,0,0.451725357233318,1.27986611154418,1.24930726552346,1.65744076430812,1.64225599384209,0.403213486449465,0,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46331618947972,5.19485760678034,6.01251535068239,3.31475892859011,6.312121671319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672510863961164,0.985153801009636,0.215627574859517,0.641715181398742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.431428401637234,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0.714695326373367,0.411362273086194,0,0,2.37937552888281,0,0,0,1.11481905075431,0.144269212976445,0.355709216742071,0.797131363644112,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0.828851746593443,0,0,1.35393286007176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02193298195737,0,0.831058409500782,0,0,0,0,0.635746315921515,0,0,0,0,0.995261931078505,0.176915129006678,0.611030144933625,0,0,0,0,0,0,0.364909578431332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,1.48849806543585,1.18566979138767,0.974340787047167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344429959321631,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0.281951753939561,0.193373663920732,0,0,0,0,0.730336388246517,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,1.16260037704811,0.372448285775147,0,0,0,0,0,0.942928742204225,0.143444410785353,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0.154816123316076,0,0,0,0.309868802321207,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,1.77901850772711,0.426730222566507,0.400395987036012,0,0,0.954053754535364,1.70763890732835,1.17447437874188,0.382273228125229,0,0,0,1.57367816091066,0.393010762749165,0.616804496998528,3.8452893939856,2.28145586643513,2.36723902867367,0,1.55974639639243,0,1.55073726208535,2.16643091012012,2.5618263945135,3.77172107923647,2.13769275984779,1.38175008892924,1.15921234294021,1.33457906845854,1.33770414044857,1.04535523804977,1.13309342697566,1.14966148080576,0.34362744548263,0.506039384039006,1.59282707162048,0.651083453856419,0,0.451725357233318,1.27986611154418,1.24930726552346,1.65744076430812,1.64225599384209,0.403213486449465,0,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46331618947972,5.19485760678034,6.01251535068239,3.31475892859011,6.312121671319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672510863961164,0.985153801009636,0.215627574859517,0.641715181398742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.431428401637234,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0.714695326373367,0.411362273086194,0,0,2.37937552888281,0,0,0,1.11481905075431,0.144269212976445,0.355709216742071,0.797131363644112,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0.828851746593443,0,0,1.35393286007176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02193298195737,0,0.831058409500782,0,0,0,0,0.635746315921515,0,0,0,0,0.995261931078505,0.176915129006678,0.611030144933625,0,0,0,0,0,0,0.364909578431332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,1.48849806543585,1.18566979138767,0.974340787047167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344429959321631,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0.281951753939561,0.193373663920732,0,0,0,0,0.730336388246517,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,1.16260037704811,0.372448285775147,0,0,0,0,0,0.942928742204225,0.143444410785353,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p3@LAX1 | |short_description=p3@LAX1 | ||
}} | }} |
Latest revision as of 23:53, 19 September 2015
Short description: | p3@LAX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LAX1_5end |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | 0bp_to_NM_001136190, NM_017773, uc001haa.2, uc010pql.1_5end |
EntrezGene: | LAX1 |
HGNC: | 26005 |
UniProt: | Q8IWV1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 4.63e-29 | 5 |
basophil mast progenitor cell | 4.63e-29 | 5 |
mature alpha-beta T cell | 4.32e-18 | 18 |
alpha-beta T cell | 4.32e-18 | 18 |
immature T cell | 4.32e-18 | 18 |
mature T cell | 4.32e-18 | 18 |
immature alpha-beta T cell | 4.32e-18 | 18 |
lymphocyte | 7.02e-17 | 53 |
common lymphoid progenitor | 7.02e-17 | 53 |
endocrine cell | 4.74e-16 | 9 |
T cell | 6.37e-16 | 25 |
pro-T cell | 6.37e-16 | 25 |
lymphoid lineage restricted progenitor cell | 8.02e-15 | 52 |
CD8-positive, alpha-beta T cell | 3.57e-12 | 11 |
hematopoietic lineage restricted progenitor cell | 8.90e-11 | 120 |
leukocyte | 2.88e-10 | 136 |
CD4-positive, alpha-beta T cell | 1.03e-08 | 6 |
naive T cell | 3.67e-08 | 3 |
hematopoietic oligopotent progenitor cell | 4.55e-08 | 161 |
hematopoietic multipotent progenitor cell | 4.55e-08 | 161 |
hematopoietic stem cell | 1.43e-07 | 168 |
hematopoietic cell | 5.42e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
lymph node | 9.79e-07 | 1 |