FFCP PHASE1:Hg19::chr15:66994523..66994541,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4091 | |EntrezGene=4091 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6772 | |HGNC=6772 | ||
|TSSclassifier=strong | |||
|UniProt=O43541 | |UniProt=O43541 | ||
|association_with_transcript=-128bp_to_ENST00000288840_5end | |association_with_transcript=-128bp_to_ENST00000288840_5end | ||
|cluster_id=chr15:66994523..66994541,+ | |||
|coexpression_cluster_id=C95 | |||
|description=CAGE_peak_5_at_SMAD6_5end | |description=CAGE_peak_5_at_SMAD6_5end | ||
|id=chr15:66994523..66994541,+ | |id=chr15:66994523..66994541,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005062;3.15e-08;4!UBERON:0007284;3.15e-08;4 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.03e-25!115;UBERON:0003075!6.12e-20!86;UBERON:0007284!6.12e-20!86;UBERON:0002346!1.18e-18!90;UBERON:0005743!7.67e-17!86;UBERON:0001049!9.53e-17!57;UBERON:0005068!9.53e-17!57;UBERON:0006241!9.53e-17!57;UBERON:0007135!9.53e-17!57;UBERON:0000025!1.32e-15!194;UBERON:0000955!4.39e-15!69;UBERON:0006238!4.39e-15!69;UBERON:0001017!1.56e-14!82;UBERON:0002616!5.10e-14!59;UBERON:0000073!9.69e-14!94;UBERON:0001016!9.69e-14!94;UBERON:0000477!1.16e-13!286;UBERON:0003056!2.69e-12!61;UBERON:0004111!3.56e-12!241;UBERON:0000153!2.26e-11!129;UBERON:0007811!2.26e-11!129;UBERON:0003080!2.82e-11!42;UBERON:0002020!5.07e-11!34;UBERON:0003528!5.07e-11!34;UBERON:0000483!9.78e-11!309;UBERON:0002780!1.31e-10!41;UBERON:0001890!1.31e-10!41;UBERON:0006240!1.31e-10!41;UBERON:0002791!2.68e-10!33;UBERON:0000119!2.86e-10!312;UBERON:0000033!3.82e-10!123;UBERON:0001893!1.00e-09!34;UBERON:0001869!9.47e-09!32;UBERON:0000064!1.09e-08!219;UBERON:0000062!5.97e-08!511;UBERON:0004121!6.36e-08!169;UBERON:0002619!9.92e-08!22;UBERON:0000924!1.50e-07!173;UBERON:0006601!1.50e-07!173;UBERON:0000481!3.11e-07!347;UBERON:0000956!4.49e-07!25;UBERON:0000203!4.49e-07!25;UBERON:0003076!5.87e-07!15;UBERON:0003057!5.87e-07!15;UBERON:0002298!7.12e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0003978;7.76e-11;3!UBERON:0000946;7.76e-11;3!UBERON:0007100;2.80e-09;25!UBERON:0000948;1.47e-08;22!UBERON:0002081;2.31e-08;2!UBERON:0002133;5.95e-08;2!UBERON:0001954;1.94e-07;2!UBERON:0003022;1.94e-07;2!UBERON:0002421;1.94e-07;2!UBERON:0002600;1.94e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003978,3.65e-11,3;UBERON:0009751,3.65e-11,3;UBERON:0000946,3.65e-11,3;UBERON:0002523,3.65e-11,3;UBERON:0005983,3.65e-11,3;UBERON:0002165,3.65e-11,3;UBERON:0002062,3.65e-11,3;UBERON:0007280,3.65e-11,3;UBERON:0007100,2.18e-08,27;UBERON:0002081,2.69e-08,2;UBERON:0010227,2.69e-08,2;UBERON:0002133,3.20e-08,2;UBERON:0000025,5.12e-08,192;UBERON:0007023,8.27e-08,114;UBERON:0000948,1.19e-07,24;UBERON:0005498,1.19e-07,24;UBERON:0004140,1.19e-07,24;UBERON:0009881,1.19e-07,24;UBERON:0004141,1.19e-07,24;UBERON:0003084,1.19e-07,24;UBERON:0007005,1.19e-07,24;UBERON:0004139,1.19e-07,24;UBERON:0004291,1.19e-07,24;UBERON:0001954,1.50e-07,2;UBERON:0003022,1.50e-07,2;UBERON:0002421,1.50e-07,2;UBERON:0002600,1.50e-07,2;UBERON:0010314,1.74e-07,132 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0,0,0.123766352960047,0,0,0,0,0,0.123121058076788,0,0,0.572471974262113,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0.284338464974843,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,1.15076305659177,1.0843174571537,1.50401373190767,0.724232594804119,0,0,0.378139268656271,0,0.263504357079378,1.96468613246569,0,0,0.324547393654683,0,0.132957960518865,0,0,0,0.39752481473341,0,0.694281003215189,1.69592382577203,1.25849830862972,0.550236083880135,1.04497483268405,0.258416759169329,0,0,0,0,0,0,2.43042584364528,0.357198913136319,0.44905874525234,1.12611480483322,0,0.949265659568129,0.549605231791222,0,0,0,0,0,0,0.286836620748814,0,0,1.06748995729705,0.24666754841716,0.311211035399766,0.269421344139376,0.490385709340376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0.907457465280168,0,0,0,0.300091096084402,0,0,0.18611685633159,0.168776332241266,0,0.252433774244115,0.184099797284599,0.161646056818812,0.355009592516614,0.201504196455281,0.169560592310488,0,0,0,0.121973706129595,0,0.116193942869518,0.310983165046111,0,0,0,0,1.38134921352481,0,0.721879481669586,0.236613600079688,0,0,0.220587945464788,0.217879444092406,0.237270619111097,0.404493924480493,0,0,1.4763109092493,0,0.4115740113314,1.47008711385542,0,0,2.36315962672562,0,0,0.343135620597051,0,0,0,0,0,0,2.88662684050547,0.463721619900307,0.117408694235822,0.577465791044295,0.462985512576611,0.380508304469197,0.790204397959275,0.858486162094873,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0,0.285826432630578,0,0,0,0.129271715757778,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0.144781306667579,0.410952645100767,0,0.672510863961164,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0.234282829985426,0,0,0,0,0.184369168541703,0,0.195801157462741,0,0,0,0,0,0,0.604780586659361,0,0,0,0.128139149255701,0,0.321707842287215,0,0,0,0.164254312027618,0,0.116210378459959,0,0,0,0,0.182091168006717,0,0,0.231046011313244,0,0,0.211103257785751,0,0.680374821106063,0.215915916102139,1.54227252690289,0.270946437543853,0,0.254876273045038,0,0,0,0,0.769350375349168,2.62411716559765,0.976135183992909,5.46117361732928,0.0915694648183434,0.165018999841176,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0.143124886741991,0,0.316379424718726,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0.633322905892992,0.329294892959902,0,0,0,0,0,5.08376524194607,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0,0.478278818186467,2.19537308576098,0.5745161103971,5.29183956809707,0,0.561594356226918,0,0,0,4.23229444504008,0,0,0,0.343505344755765,0.307240764308458,0,0,0,0.278406173895242,0,2.70455678475983,2.66457574398256,0,0,0.73254089635947,0.242721043499027,0,0.284136146806413,0.23874448473769,0.593929361665277,0,0.994147647766298,0.562677665642051,0,0,0,0.19924798825107,0,0,0.306806047506464,0,0.311039587661807,0,0.179021174675609,0,0.0986434056369336,0,0,0,0.556608588971108,1.99613798001194,0,0.0874599999961957,2.17499872630438,0.1137934482855,0,0,0,0,0,0,0.844175070377856,1.52581736317083,0.442317039724898,0.295547618953547,1.53569778007781,0,0.41827123283581,0.461701551022782,0,0,0,0,0,0,0,0,0.156980256395025,0.166211681900156,0,0,0,0.37950746544837,0.317873157960757,0,0.163232808159148,0,0.216388639742091,0,0.442287822516696,1.83309043480088,0,0,0.104421949505455,0.67401132980677,0,0.234264445725339,0,0,0,0,1.20990716048664,0.30607276163049,0.252746318513952,0,0,0,0,0.313932918407225,0,0,0.277349346026277,0,0,0,0.34945333648406,0,0.19351266257817,0.511625219603299,0.246346371159628,0.0969890164884194,0.0882561266915003,2.03382666702479,0,0,0.189932387867636,0.782205530939212,0.0801588202515337,0.213452994739353,0,0.144090417154106,0.229073192331831,0,0,0,0.235694034616795,0.135904206073614,0.104602846312333,0.203996435272644,0,1.20084057741958,0.958337652243951,0,0,0,1.95497680890578,1.3749625440701,4.30723814746088,0.199679000498991,1.28767814440971,0.669514372325618,1.14211903227435,0,0,0.0787831823072236,0,0,0.196854963029498,0,1.59045937961861,1.22583065500418,0.160753148465019,0,0,0,0,0.364497339948148,0.335434687599266,0.551639951094387,0.83927341015997,0,0.179287339332845,0,2.1440859791201,0.662091970365432,0,0,0,0,0,0,0,0.226624183040251,0.732761168390412,1.32506888912221,1.80996138906171,0.79339561045614,0.513260513652988,0.704815022316672,8.22263076771249,0.78602152549833,18.6407574906238,0,0,0,0,1.08803560673895,0.5013797880454,0,0.327872630709804,0,0,0.976210119215705,1.251909307065,1.14681839138014,0.776503360757966,0.745156835296601,0.276697269872462,0,0.454947352624943,0,0.470531639396343,0,0,0.14925480288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| ||
|short_description=p5@SMAD6 | |short_description=p5@SMAD6 | ||
}} | }} |
Latest revision as of 16:38, 18 September 2015
Short description: | p5@SMAD6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SMAD6_5end |
Coexpression cluster: | C95_lung_aorta_trachea_penis_Alveolar_throat_endometrioid |
Association with transcript: | -128bp_to_ENST00000288840_5end |
EntrezGene: | SMAD6 |
HGNC: | 6772 |
UniProt: | O43541 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
valve | 3.65e-11 | 3 |
cardiac mesenchyme | 3.65e-11 | 3 |
cardial valve | 3.65e-11 | 3 |
tunica intima | 3.65e-11 | 3 |
heart layer | 3.65e-11 | 3 |
endocardium | 3.65e-11 | 3 |
endocardial cushion | 3.65e-11 | 3 |
presumptive endocardium | 3.65e-11 | 3 |
primary circulatory organ | 2.18e-08 | 27 |
cardiac atrium | 2.69e-08 | 2 |
future cardiac atrium | 2.69e-08 | 2 |
atrioventricular valve | 3.20e-08 | 2 |
tube | 5.12e-08 | 192 |
adult organism | 8.27e-08 | 114 |
heart | 1.19e-07 | 24 |
primitive heart tube | 1.19e-07 | 24 |
primary heart field | 1.19e-07 | 24 |
anterior lateral plate mesoderm | 1.19e-07 | 24 |
heart tube | 1.19e-07 | 24 |
heart primordium | 1.19e-07 | 24 |
cardiac mesoderm | 1.19e-07 | 24 |
cardiogenic plate | 1.19e-07 | 24 |
heart rudiment | 1.19e-07 | 24 |
Ammon's horn | 1.50e-07 | 2 |
lobe parts of cerebral cortex | 1.50e-07 | 2 |
hippocampal formation | 1.50e-07 | 2 |
limbic lobe | 1.50e-07 | 2 |
structure with developmental contribution from neural crest | 1.74e-07 | 132 |