FFCP PHASE1:Hg19::chr1:203151964..203151973,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1116 | |EntrezGene=1116 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1932 | |HGNC=1932 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000472064_5end | |association_with_transcript=0bp_to_ENST00000472064_5end | ||
|cluster_id=chr1:203151964..203151973,- | |||
|coexpression_cluster_id=C283 | |||
|description=CAGE_peak_21_at_CHI3L1_5end | |description=CAGE_peak_21_at_CHI3L1_5end | ||
|id=chr1:203151964..203151973,- | |id=chr1:203151964..203151973,- | ||
|ontology_enrichment_celltype=CL:0000153!1.23e-23!9;CL:0000447!1.23e-23!9;CL:0000667!1.13e-18!6;CL:0000058!1.13e-18!6;CL:0000138!1.13e-18!6;CL:0000327!7.88e-15!14;CL:0000499!1.05e-14!27;CL:0000135!3.01e-14!3;CL:0000386!3.01e-14!3;CL:0000388!3.01e-14!3;CL:0002540!2.81e-07!6;CL:0000235!2.99e-07!10;CL:0000214!6.71e-07!3 | |ontology_enrichment_celltype=CL:0000153!1.23e-23!9;CL:0000447!1.23e-23!9;CL:0000667!1.13e-18!6;CL:0000058!1.13e-18!6;CL:0000138!1.13e-18!6;CL:0000327!7.88e-15!14;CL:0000499!1.05e-14!27;CL:0000135!3.01e-14!3;CL:0000386!3.01e-14!3;CL:0000388!3.01e-14!3;CL:0002540!2.81e-07!6;CL:0000235!2.99e-07!10;CL:0000214!6.71e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000153;4.22e-42;9!CL:0000447;4.22e-42;9!CL:0000138;1.27e-40;6!CL:0000499;2.55e-26;28!CL:0000327;2.37e-25;15!CL:0000135;9.46e-22;3!CL:0000388;9.46e-22;3!CL:0000235;4.05e-11;6!CL:0000151;8.08e-10;36!CL:0000047;7.21e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,5.01e-42,9;CL:0000447,5.01e-42,9;CL:0000058,1.57e-40,6;CL:0000138,1.57e-40,6;CL:0000499,2.76e-26,28;CL:0000327,2.63e-25,15;CL:0000135,9.47e-22,3;CL:0000388,9.47e-22,3;CL:0000235,3.57e-11,6;CL:0000151,1.37e-10,36 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5662;1.04e-16;1 | |||
|ontology_enrichment_disease_v019_2=DOID:5662,1.21e-16,1 | |||
|ontology_enrichment_uberon=UBERON:0000043!3.01e-14!3;UBERON:0006915!6.71e-07!3;UBERON:0002018!6.71e-07!3;UBERON:0002217!6.71e-07!3;UBERON:0007616!6.71e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;9.46e-22;3!UBERON:0000043;9.46e-22;3!UBERON:0007845;9.46e-22;3!UBERON:0001282;2.08e-16;1!UBERON:0009842;2.08e-16;1!UBERON:0003704;2.08e-16;1!UBERON:0001171;2.08e-16;1!UBERON:0001172;2.08e-16;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,9.47e-22,3;UBERON:0000043,9.47e-22,3;UBERON:0007845,9.47e-22,3;UBERON:0001282,1.93e-16,1;UBERON:0009842,1.93e-16,1;UBERON:0003704,1.93e-16,1;UBERON:0001171,1.93e-16,1;UBERON:0001172,1.93e-16,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,1.00267582127178,1.01392563272577,5.5670016293577,1.94653948121054,0,0,0,0,0,0,0,0.174129737299267,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462985512576611,0,0,0,0.492434012174795,2.80805118167085,1.93220510975347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0,0.580066775656914,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,2.32218398827431,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0,0,0,0,1.82307289355202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379119477770928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.864221491201268,0.326587360109409,0,0,0,0,0.293104467356165,0,0,0.13223260174269,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.757612021100357,5.78606174030923,0.889811221596536,0,0.151230923763239,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05785611324902,0.0679697329768317,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.71995018166751,12.4787419730483,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,1.00267582127178,1.01392563272577,5.5670016293577,1.94653948121054,0,0,0,0,0,0,0,0.174129737299267,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462985512576611,0,0,0,0.492434012174795,2.80805118167085,1.93220510975347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0,0.580066775656914,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,2.32218398827431,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0,0,0,0,1.82307289355202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379119477770928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.864221491201268,0.326587360109409,0,0,0,0,0.293104467356165,0,0,0.13223260174269,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.757612021100357,5.78606174030923,0.889811221596536,0,0.151230923763239,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05785611324902,0.0679697329768317,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.71995018166751,12.4787419730483,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p21@CHI3L1 | |short_description=p21@CHI3L1 | ||
}} | }} |
Latest revision as of 22:16, 19 September 2015
Short description: | p21@CHI3L1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_CHI3L1_5end |
Coexpression cluster: | C283_tenocyte_Chondrocyte_mesenchymal_Macrophage_pleomorphic_Synoviocyte_cholangiocellular |
Association with transcript: | 0bp_to_ENST00000472064_5end |
EntrezGene: | CHI3L1 |
HGNC: | 1932 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 5.01e-42 | 9 |
carbohydrate secreting cell | 5.01e-42 | 9 |
chondroblast | 1.57e-40 | 6 |
chondrocyte | 1.57e-40 | 6 |
stromal cell | 2.76e-26 | 28 |
extracellular matrix secreting cell | 2.63e-25 | 15 |
fibrocyte | 9.47e-22 | 3 |
tendon cell | 9.47e-22 | 3 |
macrophage | 3.57e-11 | 6 |
secretory cell | 1.37e-10 | 36 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 9.47e-22 | 3 |
tendon | 9.47e-22 | 3 |
regular connective tissue | 9.47e-22 | 3 |
intralobular bile duct | 1.93e-16 | 1 |
acinus | 1.93e-16 | 1 |
intrahepatic bile duct | 1.93e-16 | 1 |
portal lobule | 1.93e-16 | 1 |
hepatic acinus | 1.93e-16 | 1 |
Ontology term | p-value | n |
---|---|---|
pleomorphic carcinoma | 1.21e-16 | 1 |