FFCP PHASE1:Hg19::chr1:201708643..201708716,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=89796 | |EntrezGene=89796 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15989 | |HGNC=15989 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc001gwv.1_5end | |association_with_transcript=0bp_to_uc001gwv.1_5end | ||
|cluster_id=chr1:201708643..201708716,+ | |||
|description=CAGE_peak_8_at_NAV1_5end | |description=CAGE_peak_8_at_NAV1_5end | ||
|id=chr1:201708643..201708716,+ | |id=chr1:201708643..201708716,+ | ||
|ontology_enrichment_celltype=CL:0000359!2.70e-12!32;CL:0000055!3.30e-12!180;CL:0000680!1.01e-10!57;CL:0000056!1.01e-10!57;CL:0000355!1.01e-10!57;CL:0000183!2.62e-10!59;CL:0000187!3.65e-10!54;CL:0000136!4.17e-10!15;CL:0000192!7.23e-10!42;CL:0000514!7.23e-10!42;CL:0000222!3.09e-08!119;CL:0000393!4.29e-08!60;CL:0000211!4.29e-08!60;CL:0002494!1.53e-07!16 | |ontology_enrichment_celltype=CL:0000359!2.70e-12!32;CL:0000055!3.30e-12!180;CL:0000680!1.01e-10!57;CL:0000056!1.01e-10!57;CL:0000355!1.01e-10!57;CL:0000183!2.62e-10!59;CL:0000187!3.65e-10!54;CL:0000136!4.17e-10!15;CL:0000192!7.23e-10!42;CL:0000514!7.23e-10!42;CL:0000222!3.09e-08!119;CL:0000393!4.29e-08!60;CL:0000211!4.29e-08!60;CL:0002494!1.53e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:0000359;4.40e-17;32!CL:0000136;2.47e-13;13!CL:0000192;1.16e-08;43!CL:0002494;5.99e-07;16!CL:0002548;8.16e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,4.31e-18,32;CL:0000136,6.52e-15,15;CL:0000192,3.25e-11,43;CL:0000514,3.25e-11,43;CL:0000187,1.81e-09,55;CL:0000680,2.87e-09,58;CL:0000056,2.87e-09,58;CL:0000355,2.87e-09,58;CL:0000393,1.03e-07,61;CL:0000211,1.03e-07,61;CL:0002494,5.02e-07,16;CL:0002548,6.58e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000514;1.16e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!1.29e-16!79;UBERON:0007798!1.29e-16!79;UBERON:0004872!4.17e-16!84;UBERON:0000119!1.52e-15!312;UBERON:0001009!7.59e-15!113;UBERON:0000483!1.49e-14!309;UBERON:0004535!1.83e-14!110;UBERON:0001637!6.05e-14!42;UBERON:0003509!6.05e-14!42;UBERON:0004572!6.05e-14!42;UBERON:0000025!8.11e-14!194;UBERON:0000475!1.59e-13!365;UBERON:0000477!3.75e-13!286;UBERON:0002616!1.22e-12!59;UBERON:0001981!1.75e-12!60;UBERON:0007500!1.75e-12!60;UBERON:0004537!1.75e-12!60;UBERON:0006965!1.75e-12!60;UBERON:0003075!3.29e-12!86;UBERON:0007284!3.29e-12!86;UBERON:0004573!4.76e-12!33;UBERON:0004571!4.76e-12!33;UBERON:0004111!7.09e-12!241;UBERON:0002346!3.47e-11!90;UBERON:0000055!8.88e-11!69;UBERON:0002385!3.94e-10!63;UBERON:0001015!3.94e-10!63;UBERON:0000383!3.94e-10!63;UBERON:0001134!4.05e-10!61;UBERON:0002036!4.05e-10!61;UBERON:0003082!4.05e-10!61;UBERON:0001049!4.80e-10!57;UBERON:0005068!4.80e-10!57;UBERON:0006241!4.80e-10!57;UBERON:0007135!4.80e-10!57;UBERON:0000955!1.04e-09!69;UBERON:0006238!1.04e-09!69;UBERON:0000033!1.84e-09!123;UBERON:0000486!3.26e-09!82;UBERON:0003056!3.27e-09!61;UBERON:0000153!7.51e-09!129;UBERON:0007811!7.51e-09!129;UBERON:0005743!1.21e-08!86;UBERON:0001017!1.26e-08!82;UBERON:0007100!1.40e-08!27;UBERON:0007023!1.89e-08!115;UBERON:0000948!2.27e-08!24;UBERON:0005498!2.27e-08!24;UBERON:0004140!2.27e-08!24;UBERON:0009881!2.27e-08!24;UBERON:0004141!2.27e-08!24;UBERON:0003084!2.27e-08!24;UBERON:0007005!2.27e-08!24;UBERON:0004139!2.27e-08!24;UBERON:0004291!2.27e-08!24;UBERON:0002200!3.58e-08!11;UBERON:0006876!3.58e-08!11;UBERON:0003914!4.28e-08!118;UBERON:0003080!8.63e-08!42;UBERON:0004290!1.45e-07!70;UBERON:0001893!1.60e-07!34;UBERON:0000481!1.63e-07!347;UBERON:0002780!2.06e-07!41;UBERON:0001890!2.06e-07!41;UBERON:0006240!2.06e-07!41;UBERON:0000073!2.25e-07!94;UBERON:0001016!2.25e-07!94;UBERON:0002020!2.71e-07!34;UBERON:0003528!2.71e-07!34;UBERON:0002791!3.16e-07!33;UBERON:0004121!3.25e-07!169;UBERON:0000914!5.32e-07!83;UBERON:0002329!5.32e-07!83;UBERON:0003077!5.32e-07!83;UBERON:0003059!5.32e-07!83;UBERON:0007282!5.32e-07!83;UBERON:0009618!5.32e-07!83;UBERON:0007285!5.32e-07!83;UBERON:0001869!7.55e-07!32;UBERON:0000924!9.03e-07!173;UBERON:0006601!9.03e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.38e-13;33!UBERON:0004571;1.38e-13;33!UBERON:0001637;1.29e-12;42!UBERON:0003509;1.29e-12;42!UBERON:0004572;1.29e-12;42!UBERON:0006876;3.35e-10;11!UBERON:0002049;4.06e-09;75!UBERON:0007798;4.06e-09;75!UBERON:0007500;2.61e-08;56!UBERON:0001981;2.61e-08;56!UBERON:0004537;2.61e-08;56!UBERON:0003688;2.45e-07;6!UBERON:0002358;2.45e-07;6!UBERON:0003684;2.45e-07;6!UBERON:0001178;2.45e-07;6!UBERON:0001893;2.82e-07;34!UBERON:0000948;2.90e-07;22!UBERON:0005284;9.45e-07;5 | |||
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| ||
|short_description=p8@NAV1 | |short_description=p8@NAV1 | ||
}} | }} |
Latest revision as of 18:52, 19 September 2015
Short description: | p8@NAV1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_NAV1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc001gwv.1_5end |
EntrezGene: | NAV1 |
HGNC: | 15989 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 4.31e-18 | 32 |
fat cell | 6.52e-15 | 15 |
smooth muscle cell | 3.25e-11 | 43 |
smooth muscle myoblast | 3.25e-11 | 43 |
muscle cell | 1.81e-09 | 55 |
muscle precursor cell | 2.87e-09 | 58 |
myoblast | 2.87e-09 | 58 |
multi-potent skeletal muscle stem cell | 2.87e-09 | 58 |
electrically responsive cell | 1.03e-07 | 61 |
electrically active cell | 1.03e-07 | 61 |
cardiocyte | 5.02e-07 | 16 |
cardiac fibroblast | 6.58e-07 | 6 |