FFCP PHASE1:Hg19::chr1:201334328..201334365,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:201334328..201334365,+ | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_at_chr1:201334328..201334365,+ | |description=CAGE_peak_at_chr1:201334328..201334365,+ | ||
|id=chr1:201334328..201334365,+ | |id=chr1:201334328..201334365,+ | ||
|ontology_enrichment_celltype=CL:0000188!6.95e-18!9;CL:0000039!2.28e-08!7;CL:0000586!2.28e-08!7;CL:0000594!3.14e-08!3 | |ontology_enrichment_celltype=CL:0000188!6.95e-18!9;CL:0000039!2.28e-08!7;CL:0000586!2.28e-08!7;CL:0000594!3.14e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000188;1.18e-23;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000188,1.24e-23,9 | |||
|ontology_enrichment_development_v019=UBERON:0005062;1.27e-20;4!UBERON:0007284;1.27e-20;4!UBERON:0010227;1.80e-10;1!UBERON:0010226;1.98e-10;1!UBERON:0004140;2.71e-10;1!UBERON:0000358;3.10e-10;1 | |||
|ontology_enrichment_disease=DOID:114!6.97e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:114;4.10e-19;2!DOID:178;2.37e-10;1!DOID:326;2.37e-10;1!DOID:3978;2.37e-10;1!DOID:3394;2.37e-10;1!DOID:5844;2.37e-10;1!DOID:1287;5.08e-10;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,4.10e-19,2;DOID:178,2.37e-10,1;DOID:326,2.37e-10,1;DOID:3978,2.37e-10,1;DOID:3394,2.37e-10,1;DOID:5844,2.37e-10,1;DOID:1287,5.08e-10,4 | |||
|ontology_enrichment_uberon=UBERON:0003103!2.51e-15!69;UBERON:0007100!4.40e-14!27;UBERON:0007023!3.46e-10!115;UBERON:0004151!2.01e-09!3;UBERON:0003978!2.36e-09!3;UBERON:0009751!2.36e-09!3;UBERON:0000946!2.36e-09!3;UBERON:0002523!2.36e-09!3;UBERON:0005983!2.36e-09!3;UBERON:0002165!2.36e-09!3;UBERON:0002062!2.36e-09!3;UBERON:0007280!2.36e-09!3;UBERON:0000948!3.51e-09!24;UBERON:0005498!3.51e-09!24;UBERON:0004140!3.51e-09!24;UBERON:0009881!3.51e-09!24;UBERON:0004141!3.51e-09!24;UBERON:0003084!3.51e-09!24;UBERON:0007005!3.51e-09!24;UBERON:0004139!3.51e-09!24;UBERON:0004291!3.51e-09!24;UBERON:0002081!8.44e-07!2;UBERON:0002133!9.67e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;1.17e-27;25!UBERON:0004151;1.75e-27;3!UBERON:0003978;2.85e-27;3!UBERON:0000946;2.85e-27;3!UBERON:0001134;2.05e-25;16!UBERON:0002036;2.05e-25;16!UBERON:0002081;7.68e-19;2!UBERON:0002133;1.15e-18;2!UBERON:0000948;3.24e-14;22!UBERON:0002385;1.47e-12;31!UBERON:0001015;1.47e-12;31!UBERON:0000383;1.47e-12;31!UBERON:0002079;1.80e-10;1!UBERON:0002084;1.98e-10;1!UBERON:0002082;1.98e-10;1!UBERON:0002146;2.16e-10;1!UBERON:0005623;2.16e-10;1!UBERON:0002135;2.71e-10;1!UBERON:0002134;4.06e-10;1!UBERON:0005208;4.06e-10;1!UBERON:0004145;4.06e-10;1!UBERON:0005946;4.06e-10;1!UBERON:0005965;4.06e-10;1!UBERON:0002078;4.06e-10;1!UBERON:0007029;8.99e-10;1!UBERON:0010313;1.42e-08;10!UBERON:0003103;5.37e-08;61 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,1.75e-27,3;UBERON:0003978,2.98e-27,3;UBERON:0009751,2.98e-27,3;UBERON:0000946,2.98e-27,3;UBERON:0002523,2.98e-27,3;UBERON:0005983,2.98e-27,3;UBERON:0002165,2.98e-27,3;UBERON:0002062,2.98e-27,3;UBERON:0007280,2.98e-27,3;UBERON:0007100,1.61e-25,27;UBERON:0002081,7.68e-19,2;UBERON:0010227,7.68e-19,2;UBERON:0002133,1.20e-18,2;UBERON:0003103,5.71e-14,68;UBERON:0000948,5.40e-13,24;UBERON:0005498,5.40e-13,24;UBERON:0004140,5.40e-13,24;UBERON:0009881,5.40e-13,24;UBERON:0004141,5.40e-13,24;UBERON:0003084,5.40e-13,24;UBERON:0007005,5.40e-13,24;UBERON:0004139,5.40e-13,24;UBERON:0004291,5.40e-13,24;UBERON:0004797,5.02e-12,7;UBERON:0002079,1.80e-10,1;UBERON:0002084,1.98e-10,1;UBERON:0002082,1.98e-10,1;UBERON:0010226,1.98e-10,1;UBERON:0002146,2.16e-10,1;UBERON:0005623,2.16e-10,1;UBERON:0002135,2.84e-10,1;UBERON:0002134,4.06e-10,1;UBERON:0005208,4.06e-10,1;UBERON:0005946,4.06e-10,1;UBERON:0005965,4.06e-10,1;UBERON:0002078,4.06e-10,1;UBERON:0007029,7.55e-10,1;UBERON:0010313,1.44e-08,10;UBERON:0002342,1.44e-08,10;UBERON:0005062,1.44e-08,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0.49333509683432,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15825045334063,0,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0.195801157462741,4.46086450954113,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,2.12675580242668,0.770243085573222,1.38153307253517,1.37836572484531,0.107420244868274,0.580066775656914,3.66474497889234,15.8477023451192,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.493217028184668,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.46112780877612,0.0897576444097721,0.325942115766024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.90392296312213,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,33.2346057513982,52.9360579466989,10.0502223440754,45.726491114269,103.014251552777,14.7293161911636,33.5917362433631,0.720599767084807,0,0,0,0,0,0,0,0,0,0.275078873194468,0,0,0,0.0607495566580247,0,0.315222829196793,0.104909176269996,0,0,0,86.4781344911774,80.1131284142172,1.5256112259285,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0.610131324509816,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0,6.0004164699473,0,0,0,0,0.643324774124777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0.322951291263702,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197318320688547,0,0,0.156986185701028,0,0,0,0,0,0,0,0.23248285073625,0.695433089210318,0,0,0,0,0,0,0,0,1.3746412112643,0,0,0,0,0,0,0.102662806856247,4.6392577253528,1.94284397223656,0,0,0,0,0,0,0,0,0,0.735444965261716,0,0.196308467114945,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0.203977659483963,0,0.275684698604535,0,0,0,0,0,0,0.952257725854961,0,0,0,0,0,0.217716747896961,0.342233301085281,0,0,1.99596213927608,0,0,0,0,18.7712753922763,0,0,0,0.402547587182052,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0.49333509683432,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15825045334063,0,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0.195801157462741,4.46086450954113,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,2.12675580242668,0.770243085573222,1.38153307253517,1.37836572484531,0.107420244868274,0.580066775656914,3.66474497889234,15.8477023451192,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.493217028184668,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.46112780877612,0.0897576444097721,0.325942115766024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.90392296312213,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,33.2346057513982,52.9360579466989,10.0502223440754,45.726491114269,103.014251552777,14.7293161911636,33.5917362433631,0.720599767084807,0,0,0,0,0,0,0,0,0,0.275078873194468,0,0,0,0.0607495566580247,0,0.315222829196793,0.104909176269996,0,0,0,86.4781344911774,80.1131284142172,1.5256112259285,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0.610131324509816,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0,6.0004164699473,0,0,0,0,0.643324774124777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0.322951291263702,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197318320688547,0,0,0.156986185701028,0,0,0,0,0,0,0,0.23248285073625,0.695433089210318,0,0,0,0,0,0,0,0,1.3746412112643,0,0,0,0,0,0,0.102662806856247,4.6392577253528,1.94284397223656,0,0,0,0,0,0,0,0,0,0.735444965261716,0,0.196308467114945,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0.203977659483963,0,0.275684698604535,0,0,0,0,0,0,0.952257725854961,0,0,0,0,0,0.217716747896961,0.342233301085281,0,0,1.99596213927608,0,0,0,0,18.7712753922763,0,0,0,0.402547587182052,0 | ||
|short_description=p@chr1:201334328..201334365,+ | |short_description=p@chr1:201334328..201334365,+ | ||
}} | }} |
Latest revision as of 02:07, 28 July 2015
Short description: | p@chr1:201334328..201334365, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:201334328..201334365, + |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 1.24e-23 | 9 |
Ontology term | p-value | n |
---|---|---|
heart disease | 4.10e-19 | 2 |
vascular disease | 2.37e-10 | 1 |
ischemia | 2.37e-10 | 1 |
extrinsic cardiomyopathy | 2.37e-10 | 1 |
myocardial ischemia | 2.37e-10 | 1 |
myocardial infarction | 2.37e-10 | 1 |
cardiovascular system disease | 5.08e-10 | 4 |