FFCP PHASE1:Hg19::chr1:201333446..201333456,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7139 | |EntrezGene=7139 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11949 | |HGNC=11949 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-130bp_to_ENST00000460780,uc001gwj.1_5end | |association_with_transcript=-130bp_to_ENST00000460780,uc001gwj.1_5end | ||
|cluster_id=chr1:201333446..201333456,- | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_18_at_TNNT2_5end | |description=CAGE_peak_18_at_TNNT2_5end | ||
|id=chr1:201333446..201333456,- | |id=chr1:201333446..201333456,- | ||
|ontology_enrichment_celltype=CL:0000188!4.16e-17!9;CL:0000515!3.28e-07!4 | |ontology_enrichment_celltype=CL:0000188!4.16e-17!9;CL:0000515!3.28e-07!4 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005062;5.66e-45;4!UBERON:0007284;5.66e-45;4!UBERON:0010227;2.30e-21;1!UBERON:0010226;3.12e-21;1!UBERON:0004140;7.72e-21;1!UBERON:0006603;8.84e-07;65 | |||
|ontology_enrichment_disease=DOID:114!2.22e-14!2;DOID:178!5.58e-08!1;DOID:326!5.58e-08!1;DOID:3978!5.58e-08!1;DOID:3394!5.58e-08!1;DOID:5844!5.58e-08!1;DOID:1287!1.31e-07!4 | |||
|ontology_enrichment_disease_v019=DOID:114;6.63e-41;2!DOID:178;3.12e-21;1!DOID:326;3.12e-21;1!DOID:3978;3.12e-21;1!DOID:3394;3.12e-21;1!DOID:5844;3.12e-21;1!DOID:1287;4.92e-21;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,7.33e-41,2;DOID:178,3.45e-21,1;DOID:326,3.45e-21,1;DOID:3978,3.45e-21,1;DOID:3394,3.45e-21,1;DOID:5844,3.45e-21,1;DOID:1287,5.17e-21,4 | |||
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|ontology_enrichment_uberon_v019=UBERON:0007100;1.85e-63;25!UBERON:0004151;1.10e-59;3!UBERON:0003978;1.22e-59;3!UBERON:0000946;1.22e-59;3!UBERON:0002081;2.46e-40;2!UBERON:0002133;4.49e-40;2!UBERON:0000948;2.97e-32;22!UBERON:0002146;1.88e-21;1!UBERON:0005623;1.88e-21;1!UBERON:0002079;2.30e-21;1!UBERON:0002084;3.12e-21;1!UBERON:0002082;3.12e-21;1!UBERON:0002135;4.22e-21;1!UBERON:0002134;7.72e-21;1!UBERON:0005208;7.72e-21;1!UBERON:0004145;7.72e-21;1!UBERON:0005946;7.72e-21;1!UBERON:0005965;7.72e-21;1!UBERON:0002078;7.72e-21;1!UBERON:0010313;1.73e-18;10!UBERON:0003103;6.86e-13;61!UBERON:0001009;3.14e-07;112 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,1.22e-59,3;UBERON:0003978,1.49e-59,3;UBERON:0009751,1.49e-59,3;UBERON:0000946,1.49e-59,3;UBERON:0002523,1.49e-59,3;UBERON:0005983,1.49e-59,3;UBERON:0002165,1.49e-59,3;UBERON:0002062,1.49e-59,3;UBERON:0007280,1.49e-59,3;UBERON:0007100,9.37e-59,27;UBERON:0002081,3.01e-40,2;UBERON:0010227,3.01e-40,2;UBERON:0002133,5.49e-40,2;UBERON:0000948,1.38e-29,24;UBERON:0005498,1.38e-29,24;UBERON:0004140,1.38e-29,24;UBERON:0009881,1.38e-29,24;UBERON:0004141,1.38e-29,24;UBERON:0003084,1.38e-29,24;UBERON:0007005,1.38e-29,24;UBERON:0004139,1.38e-29,24;UBERON:0004291,1.38e-29,24;UBERON:0004797,4.87e-26,7;UBERON:0003103,3.23e-23,68;UBERON:0002146,1.88e-21,1;UBERON:0005623,1.88e-21,1;UBERON:0002079,2.30e-21,1;UBERON:0002084,2.82e-21,1;UBERON:0002082,2.82e-21,1;UBERON:0010226,2.82e-21,1;UBERON:0002135,4.22e-21,1;UBERON:0002134,9.43e-21,1;UBERON:0005208,9.43e-21,1;UBERON:0005946,9.43e-21,1;UBERON:0005965,9.43e-21,1;UBERON:0002078,9.43e-21,1;UBERON:0010313,1.83e-18,10;UBERON:0002342,1.83e-18,10;UBERON:0005062,1.83e-18,10;UBERON:0001009,5.85e-14,112;UBERON:0007023,7.89e-11,114;UBERON:0004872,1.57e-08,83;UBERON:0004145,8.29e-08,3 | |||
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|short_description=p18@TNNT2 | |short_description=p18@TNNT2 | ||
}} | }} |
Latest revision as of 17:26, 19 September 2015
Short description: | p18@TNNT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_TNNT2_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | -130bp_to_ENST00000460780, uc001gwj.1_5end |
EntrezGene: | TNNT2 |
HGNC: | 11949 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart disease | 7.33e-41 | 2 |
vascular disease | 3.45e-21 | 1 |
ischemia | 3.45e-21 | 1 |
extrinsic cardiomyopathy | 3.45e-21 | 1 |
myocardial ischemia | 3.45e-21 | 1 |
myocardial infarction | 3.45e-21 | 1 |
cardiovascular system disease | 5.17e-21 | 4 |