FFCP PHASE1:Hg19::chr1:200864071..200864088,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55765 | |EntrezGene=55765 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25599 | |HGNC=25599 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=72bp_to_uc010ppm.1_5end | |association_with_transcript=72bp_to_uc010ppm.1_5end | ||
|cluster_id=chr1:200864071..200864088,+ | |||
|coexpression_cluster_id=C226 | |||
|description=CAGE_peak_3_at_C1orf106_5end | |description=CAGE_peak_3_at_C1orf106_5end | ||
|id=chr1:200864071..200864088,+ | |id=chr1:200864071..200864088,+ | ||
|ontology_enrichment_celltype=CL:0002076!5.14e-32!43;CL:0000223!1.02e-30!59;CL:0000066!4.19e-28!254;CL:0002368!3.78e-16!13;CL:0002251!1.30e-14!21;CL:0002202!5.86e-11!9;CL:0002632!5.86e-11!9;CL:0002159!1.31e-10!13;CL:0000244!2.75e-07!4;CL:0000731!2.75e-07!4 | |ontology_enrichment_celltype=CL:0002076!5.14e-32!43;CL:0000223!1.02e-30!59;CL:0000066!4.19e-28!254;CL:0002368!3.78e-16!13;CL:0002251!1.30e-14!21;CL:0002202!5.86e-11!9;CL:0002632!5.86e-11!9;CL:0002159!1.31e-10!13;CL:0000244!2.75e-07!4;CL:0000731!2.75e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0002076;1.03e-27;42!CL:0002368;3.56e-24;13!CL:0002251;2.96e-16;20!CL:0002202;3.26e-16;9!CL:0002632;3.26e-16;9!CL:0002159;7.80e-15;14!CL:0000244;2.03e-10;4!CL:0000731;2.03e-10;4!CL:0002328;1.80e-08;3!CL:0000307;2.20e-08;3!CL:0002621;5.02e-08;3!CL:0000622;2.05e-07;5!CL:0002166;3.74e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.18e-38,42;CL:0000223,8.10e-34,58;CL:0000066,5.12e-31,253;CL:0002368,2.68e-24,13;CL:0002251,2.06e-16,20;CL:0002202,2.74e-16,9;CL:0002632,2.74e-16,9;CL:0002159,7.89e-15,14;CL:0000244,2.24e-10,4;CL:0000731,2.24e-10,4;CL:0002328,1.80e-08,3;CL:0000068,2.08e-08,3;CL:0000069,2.08e-08,3;CL:0000307,2.08e-08,3;CL:0000377,2.08e-08,3;CL:0002621,4.64e-08,3;CL:0002321,1.76e-07,250;CL:0000076,2.11e-07,63;CL:0000622,2.16e-07,5;CL:0002166,3.22e-07,3;CL:0002077,5.51e-07,34 | |||
|ontology_enrichment_development_v019=CL:0000223;7.01e-17;58!CL:0000377;2.20e-08;3 | |||
|ontology_enrichment_disease=DOID:1749!2.48e-15!14;DOID:305!1.11e-12!106;DOID:0050687!1.85e-08!143;DOID:299!3.10e-08!25 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.15e-14;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,8.52e-15,14;DOID:305,1.72e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.88e-28!169;UBERON:0000925!2.88e-28!169;UBERON:0006595!2.88e-28!169;UBERON:0001007!1.88e-21!155;UBERON:0001555!1.88e-21!155;UBERON:0007026!1.88e-21!155;UBERON:0004921!2.42e-18!129;UBERON:0004185!2.42e-18!129;UBERON:0000077!5.68e-18!130;UBERON:0000161!2.11e-15!35;UBERON:0001004!8.36e-15!72;UBERON:0000466!1.71e-13!126;UBERON:0001008!3.08e-13!45;UBERON:0000464!4.46e-13!104;UBERON:0005911!5.85e-13!82;UBERON:0006554!1.47e-12!44;UBERON:0001041!7.89e-12!98;UBERON:0005177!3.35e-11!107;UBERON:0000166!4.69e-11!21;UBERON:0000344!2.02e-10!12;UBERON:0000065!3.63e-10!53;UBERON:0003104!6.49e-10!238;UBERON:0009142!6.49e-10!238;UBERON:0000062!9.16e-10!511;UBERON:0007196!1.14e-09!14;UBERON:0001558!1.14e-09!14;UBERON:0003064!3.76e-09!37;UBERON:0000165!1.30e-08!28;UBERON:0000930!1.30e-08!28;UBERON:0000365!1.94e-08!5;UBERON:0005153!2.80e-08!37;UBERON:0005178!2.82e-08!34;UBERON:0002224!2.82e-08!34;UBERON:0003729!5.42e-08!5;UBERON:0005181!6.62e-08!35;UBERON:0000974!1.37e-07!10;UBERON:0003102!2.25e-07!95;UBERON:0000058!4.84e-07!26;UBERON:0000467!5.00e-07!625;UBERON:0000481!5.36e-07!347;UBERON:0001046!5.50e-07!19;UBERON:0000480!5.77e-07!626;UBERON:0005910!6.77e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0000165;2.05e-12;28!UBERON:0000365;3.57e-12;5!UBERON:0000161;5.06e-12;19!UBERON:0000166;5.06e-12;19!UBERON:0000486;9.01e-12;12!UBERON:0007196;2.61e-11;15!UBERON:0001558;2.61e-11;15!UBERON:0003729;3.17e-10;13!UBERON:0005910;4.67e-10;6!UBERON:0000344;1.28e-09;20!UBERON:0003343;2.76e-09;4!UBERON:0004785;2.76e-09;4!UBERON:0000974;2.94e-09;6!UBERON:0004815;1.80e-08;3!UBERON:0002031;1.80e-08;3!UBERON:0001949;5.02e-08;3!UBERON:0001555;6.11e-08;54!UBERON:0005911;9.63e-08;36!UBERON:0001723;2.95e-07;3!UBERON:0001033;2.95e-07;3!UBERON:0004807;4.60e-07;22!UBERON:0005178;4.62e-07;34!UBERON:0002224;4.62e-07;34!UBERON:0006554;6.85e-07;30!UBERON:0001008;6.85e-07;30 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.45e-18,160;UBERON:0000925,2.45e-18,160;UBERON:0006595,2.45e-18,160;UBERON:0001004,3.03e-15,74;UBERON:0000166,2.21e-14,22;UBERON:0001007,1.25e-12,145;UBERON:0001555,1.25e-12,145;UBERON:0007026,1.25e-12,145;UBERON:0000365,3.84e-12,5;UBERON:0000161,5.63e-12,36;UBERON:0000165,5.95e-12,29;UBERON:0000930,5.95e-12,29;UBERON:0007196,2.16e-11,15;UBERON:0001558,2.16e-11,15;UBERON:0003729,2.43e-10,13;UBERON:0003102,2.46e-10,99;UBERON:0005910,4.95e-10,6;UBERON:0000344,9.99e-10,20;UBERON:0000033,1.19e-09,56;UBERON:0003343,2.03e-09,4;UBERON:0004785,2.03e-09,4;UBERON:0000065,2.20e-09,54;UBERON:0000153,2.45e-09,62;UBERON:0007811,2.45e-09,62;UBERON:0004921,9.74e-09,118;UBERON:0004815,1.80e-08,3;UBERON:0002031,1.80e-08,3;UBERON:0001949,4.64e-08,3;UBERON:0001444,6.10e-08,49;UBERON:0001041,1.16e-07,87;UBERON:0005178,1.58e-07,34;UBERON:0002224,1.58e-07,34;UBERON:0001723,2.76e-07,3;UBERON:0001033,2.76e-07,3;UBERON:0010056,2.76e-07,3;UBERON:0005181,3.12e-07,35;UBERON:0005177,3.31e-07,101;UBERON:0005911,9.04e-07,82 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,2.7030733015166,5.58240934377942,0.218441372130172,1.05506791291381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.27479102031034,8.433765725791,6.65557218300218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.72038491523742,5.82872461268068,8.15725774125745,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.7745394078484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.73043412653187,3.81844568827169,6.59650569394709,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983907508344908,0,6.36551655370028,6.74410519545717,1.10581869652794,4.90718759340207,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87467667973554,4.36753533317035,3.40260233381728,1.34337784054272,1.16253575405585,3.06706143332169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.909382714338778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846016147141356,6.21570057940183,2.30202472339741,0,0,0.131124414959424,2.25599806453706,1.77135275340154,0,4.38417673959782,2.00548094896464,0,0,0,0,0,0,3.05851527654046,0.831076008928724,0.895499018888713,0,0,0,0,0,0,0,0,6.89118645595407,5.20048196829217,0,0,0,0,0,0,0,0,0,4.95854746082934,6.3422722230485,3.82838137483752,3.6416801107998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.86954887625624,14.7466500617873,7.62236894029258,0.0941438007767792,8.6101074534246,5.05414427002877,11.9726141454902,4.13502120372527,0,0,0,0,0,0,0,0,0,0,5.88096518354476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.748562161632879,0,0,0,0,0.71623345421307,0.296964680832639,0.614321404198464,0,0,0,0,0,0.19924798825107,0.552567831062295,0,0,0,0,0.808815160325942,1.61119057208048,0,0.789147245095469,0,0,0,0,0,0,0,0,3.98277068999249,1.5255219017566,0,0,0,0,0,0,0,0,0,0,0,2.92789862985067,1.61595542857974,0,0.23056390438806,1.07709173291727,1.08647371922008,0.31900115973192,0.915975934018623,2.13213910407454,0,0,0,0,0,0,0,0,0.210998064528027,0.326465616318295,0.706765357169704,0,0,1.50377859655677,0,0,0,0,0,0,0,0,2.93496928398135,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0.284609546029793,0,2.08271686002157,6.36950583193455,2.43765778425127,0.34945333648406,0,0,0,0,8.53503345098091,0.264768380074501,0.225980740780532,0,0,0,1.17330829640882,0.721429382263803,1.70762395791482,0,1.87317542300338,0,0,0,0,1.64985824231757,0,0,0,0,0,0,0,0,0,0,0,0,0.998395002494955,0,0,0,0,2.32991899054908,0.393915911536118,0.164831716762333,0.404421263125109,0,0,0,0,0,0,0,0.2249738915515,4.6428117273477,0,5.36695500158826,0.945668487590378,0.83927341015997,0,0,0.383830394638891,0,0,0.25426853765475,0,0,0,0,0,0,0,0,0,0,0,0,4.22889013390003,0.106787412567695,0.471612915298998,0,0,0,0,7.021753835472,0,0,0,0,0,0,0,0,0,0,0,0,0.37494122388632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.617602894321944,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422624246717254,0,0,0,0,0,1.39879507719444,3.11038630016486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.96848801357282,1.88751557356385,5.68628655417205,2.19498765685643,0,0,0,0,0,0.781514011233092,1.83334686136996,0,3.54854606920909,0,0,0,0,0,0,1.98484471355718,0,4.85497225030462,0,0,0,0,0.177404740325278,0,0,0,0,0,0.778619813244484,0.941917114206168,0,0.840816489941367,0,0,0,0,0,0,0,0,0,1.53646629384555,2.07377898544228,0.860454717640555,0,0,0.846774100381858,2.52017555398455,0,0,6.04019331708079,0.98150233615243,2.19452264968085,0,0,0,0.971421986118279,0,0,0,0,0,0,2.39239890134628,1.09279780251979,0,0.490296643507811,0,0,0,0,0,0,0,0,4.10674058793012,0.352894871715692,0.641930933513346,0.730336388246517,1.37618785021362,0,0,0,0,0,0,0,0,0,0,0,0.305966489225945,0,1.47031839255752,0,0,0,0,0,3.62497769231668,0.23806443146374,0.258355639344024,0.31037357147929,0,0,0,3.9189014621453,3.76456631193809,6.86990940748793,2.86888821570705,0.99798106963804,2.36069478971826,0,0,1.43720323370539,0,0.244482888365733,0.406896178315738,0.665756774185513,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,2.7030733015166,5.58240934377942,0.218441372130172,1.05506791291381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.27479102031034,8.433765725791,6.65557218300218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.72038491523742,5.82872461268068,8.15725774125745,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.7745394078484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.73043412653187,3.81844568827169,6.59650569394709,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983907508344908,0,6.36551655370028,6.74410519545717,1.10581869652794,4.90718759340207,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87467667973554,4.36753533317035,3.40260233381728,1.34337784054272,1.16253575405585,3.06706143332169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.909382714338778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846016147141356,6.21570057940183,2.30202472339741,0,0,0.131124414959424,2.25599806453706,1.77135275340154,0,4.38417673959782,2.00548094896464,0,0,0,0,0,0,3.05851527654046,0.831076008928724,0.895499018888713,0,0,0,0,0,0,0,0,6.89118645595407,5.20048196829217,0,0,0,0,0,0,0,0,0,4.95854746082934,6.3422722230485,3.82838137483752,3.6416801107998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.86954887625624,14.7466500617873,7.62236894029258,0.0941438007767792,8.6101074534246,5.05414427002877,11.9726141454902,4.13502120372527,0,0,0,0,0,0,0,0,0,0,5.88096518354476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.748562161632879,0,0,0,0,0.71623345421307,0.296964680832639,0.614321404198464,0,0,0,0,0,0.19924798825107,0.552567831062295,0,0,0,0,0.808815160325942,1.61119057208048,0,0.789147245095469,0,0,0,0,0,0,0,0,3.98277068999249,1.5255219017566,0,0,0,0,0,0,0,0,0,0,0,2.92789862985067,1.61595542857974,0,0.23056390438806,1.07709173291727,1.08647371922008,0.31900115973192,0.915975934018623,2.13213910407454,0,0,0,0,0,0,0,0,0.210998064528027,0.326465616318295,0.706765357169704,0,0,1.50377859655677,0,0,0,0,0,0,0,0,2.93496928398135,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0.284609546029793,0,2.08271686002157,6.36950583193455,2.43765778425127,0.34945333648406,0,0,0,0,8.53503345098091,0.264768380074501,0.225980740780532,0,0,0,1.17330829640882,0.721429382263803,1.70762395791482,0,1.87317542300338,0,0,0,0,1.64985824231757,0,0,0,0,0,0,0,0,0,0,0,0,0.998395002494955,0,0,0,0,2.32991899054908,0.393915911536118,0.164831716762333,0.404421263125109,0,0,0,0,0,0,0,0.2249738915515,4.6428117273477,0,5.36695500158826,0.945668487590378,0.83927341015997,0,0,0.383830394638891,0,0,0.25426853765475,0,0,0,0,0,0,0,0,0,0,0,0,4.22889013390003,0.106787412567695,0.471612915298998,0,0,0,0,7.021753835472,0,0,0,0,0,0,0,0,0,0,0,0,0.37494122388632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.617602894321944,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422624246717254,0,0,0,0,0,1.39879507719444,3.11038630016486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.96848801357282,1.88751557356385,5.68628655417205,2.19498765685643,0,0,0,0,0,0.781514011233092,1.83334686136996,0,3.54854606920909,0,0,0,0,0,0,1.98484471355718,0,4.85497225030462,0,0,0,0,0.177404740325278,0,0,0,0,0,0.778619813244484,0.941917114206168,0,0.840816489941367,0,0,0,0,0,0,0,0,0,1.53646629384555,2.07377898544228,0.860454717640555,0,0,0.846774100381858,2.52017555398455,0,0,6.04019331708079,0.98150233615243,2.19452264968085,0,0,0,0.971421986118279,0,0,0,0,0,0,2.39239890134628,1.09279780251979,0,0.490296643507811,0,0,0,0,0,0,0,0,4.10674058793012,0.352894871715692,0.641930933513346,0.730336388246517,1.37618785021362,0,0,0,0,0,0,0,0,0,0,0,0.305966489225945,0,1.47031839255752,0,0,0,0,0,3.62497769231668,0.23806443146374,0.258355639344024,0.31037357147929,0,0,0,3.9189014621453,3.76456631193809,6.86990940748793,2.86888821570705,0.99798106963804,2.36069478971826,0,0,1.43720323370539,0,0.244482888365733,0.406896178315738,0.665756774185513,0,0 | ||
|short_description=p3@C1orf106 | |short_description=p3@C1orf106 | ||
}} | }} |
Latest revision as of 16:43, 19 September 2015
Short description: | p3@C1orf106 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_C1orf106_5end |
Coexpression cluster: | C226_Corneal_Keratinocyte_Esophageal_Urothelial_Mammary_Bronchial_Tracheal |
Association with transcript: | 72bp_to_uc010ppm.1_5end |
EntrezGene: | C1orf106 |
HGNC: | 25599 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 1.18e-38 | 42 |
endodermal cell | 8.10e-34 | 58 |
epithelial cell | 5.12e-31 | 253 |
respiratory epithelial cell | 2.68e-24 | 13 |
epithelial cell of alimentary canal | 2.06e-16 | 20 |
epithelial cell of tracheobronchial tree | 2.74e-16 | 9 |
epithelial cell of lower respiratory tract | 2.74e-16 | 9 |
general ecto-epithelial cell | 7.89e-15 | 14 |
transitional epithelial cell | 2.24e-10 | 4 |
urothelial cell | 2.24e-10 | 4 |
bronchial epithelial cell | 1.80e-08 | 3 |
duct epithelial cell | 2.08e-08 | 3 |
branched duct epithelial cell | 2.08e-08 | 3 |
tracheal epithelial cell | 2.08e-08 | 3 |
tracheoblast | 2.08e-08 | 3 |
gingival epithelial cell | 4.64e-08 | 3 |
embryonic cell | 1.76e-07 | 250 |
squamous epithelial cell | 2.11e-07 | 63 |
acinar cell | 2.16e-07 | 5 |
epithelial cell of Malassez | 3.22e-07 | 3 |
ecto-epithelial cell | 5.51e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 8.52e-15 | 14 |
carcinoma | 1.72e-08 | 106 |