FFCP PHASE1:Hg19::chr15:63050728..63050744,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83660 | |EntrezGene=83660 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15447 | |HGNC=15447 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-44bp_to_ENST00000472902,uc002ald.2_5end | |association_with_transcript=-44bp_to_ENST00000472902,uc002ald.2_5end | ||
|cluster_id=chr15:63050728..63050744,+ | |||
|coexpression_cluster_id=C3502 | |||
|description=CAGE_peak_13_at_TLN2_5end | |description=CAGE_peak_13_at_TLN2_5end | ||
|id=chr15:63050728..63050744,+ | |id=chr15:63050728..63050744,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002536;3.44e-15;2!CL:0002573;4.57e-11;2!CL:0002577;8.85e-11;3!CL:0000511;1.90e-08;1!CL:0002625;1.90e-08;1!CL:0000216;1.90e-08;1!CL:1000306;3.11e-08;4!CL:0002547;3.11e-08;4!CL:0000243;4.56e-07;15!CL:0000125;4.56e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002536,8.76e-15,2;CL:0002573,4.59e-11,2;CL:0002577,9.10e-11,3;CL:0000511,1.27e-08,1;CL:0002625,1.27e-08,1;CL:0000216,1.27e-08,1;CL:1000306,2.75e-08,4;CL:0002547,2.75e-08,4;CL:0000243,3.95e-07,15;CL:0000125,3.95e-07,15;CL:0000030,3.95e-07,15;CL:0000339,3.95e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000339;4.56e-07;15!UBERON:0005795;6.27e-07;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060084;6.87e-22;3!DOID:127;6.87e-22;3!DOID:0060072;1.42e-16;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,1.09e-22,3;DOID:127,1.09e-22,3;DOID:0060072,3.61e-17,4 | |||
|ontology_enrichment_uberon=UBERON:0000119!8.76e-10!312;UBERON:0000483!9.79e-10!309;UBERON:0003075!4.35e-09!86;UBERON:0007284!4.35e-09!86;UBERON:0004121!2.12e-08!169;UBERON:0002346!3.11e-08!90;UBERON:0000924!7.22e-08!173;UBERON:0006601!7.22e-08!173;UBERON:0000475!8.08e-08!365;UBERON:0005743!2.52e-07!86;UBERON:0000073!3.82e-07!94;UBERON:0001016!3.82e-07!94;UBERON:0001017!9.00e-07!82 | |ontology_enrichment_uberon=UBERON:0000119!8.76e-10!312;UBERON:0000483!9.79e-10!309;UBERON:0003075!4.35e-09!86;UBERON:0007284!4.35e-09!86;UBERON:0004121!2.12e-08!169;UBERON:0002346!3.11e-08!90;UBERON:0000924!7.22e-08!173;UBERON:0006601!7.22e-08!173;UBERON:0000475!8.08e-08!365;UBERON:0005743!2.52e-07!86;UBERON:0000073!3.82e-07!94;UBERON:0001016!3.82e-07!94;UBERON:0001017!9.00e-07!82 | ||
|ontology_enrichment_uberon_v019=UBERON:0001136;1.90e-08;1!UBERON:0001343;1.90e-08;1!UBERON:0004910;1.90e-08;1!UBERON:0004813;1.90e-08;1!UBERON:0001987;2.69e-08;4!UBERON:0004797;3.11e-08;4!UBERON:0000415;3.11e-08;4!UBERON:0007240;3.11e-08;4!UBERON:0005742;3.11e-08;4!UBERON:0005734;3.11e-08;4!UBERON:0004664;3.11e-08;4!UBERON:0004663;3.11e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,1.27e-08,1;UBERON:0001343,1.27e-08,1;UBERON:0004910,1.27e-08,1;UBERON:0005154,1.27e-08,1;UBERON:0005295,1.27e-08,1;UBERON:0004813,1.27e-08,1;UBERON:0005297,1.27e-08,1;UBERON:0005294,1.27e-08,1;UBERON:0010141,1.27e-08,1;UBERON:0005891,1.27e-08,1;UBERON:0000995,1.38e-08,21;UBERON:0004871,1.83e-08,8;UBERON:0005631,2.48e-08,14;UBERON:0000158,2.48e-08,14;UBERON:0001987,2.75e-08,4;UBERON:0000415,2.75e-08,4;UBERON:0007240,2.75e-08,4;UBERON:0005742,2.75e-08,4;UBERON:0005734,2.75e-08,4;UBERON:0004664,2.75e-08,4;UBERON:0004663,2.75e-08,4;UBERON:0004340,2.75e-08,4;UBERON:0005795,3.48e-08,22;UBERON:0003975,3.48e-08,22;UBERON:0004175,3.57e-07,25 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.281908808191942,0,0,0,0,0,0,0,0,1.09220686065086,1.05506791291381,0,0,0.672325146451775,0.602694528023977,0,0,0.246242116153576,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0.175669571386252,0.130979075497713,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0.12663051166458,1.58891016975863,2.0078563452417,0,1.12135520028461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.538168907066586,0,0,0.900273288253207,0.103052529238439,0,0,0.506328996723799,0.194874010322397,0,0.184099797284599,0,0.355009592516614,0.201504196455281,0.169560592310488,0,1.36373060295417,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0.171567810298526,0.878002283269004,1.1240175325762,0.100528972411631,0.0925884451585296,0,0,0,0,0.469634776943287,0,0,0,0,0,0,0,0,0,0.839910640994298,0.283550194484773,0.179117045405697,0,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0.399891964728228,0,0,0,0,0,0,0.289562613335158,0,0.537182889719687,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0.117141414992713,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0.606255142892519,8.32177197552485,1.20956117331872,0.744323423456331,0.61384789315225,0.280660094433074,0.512556597022804,0.511707249066704,0,0,0,0,0.0821271560138091,0.519254429183621,0.232420756919918,0,0,0.184161977871793,0,0,0,0,0,0.784349769176855,0,0,0,0,0,0,0.270946437543853,1.00337954770971,0,0,0.223874754722178,0,0,0,0,0.650756789328606,0.103041011647722,0.366277859273374,0.165018999841176,0.574265537996172,0,1.6068392984416,0.290012154876366,0,0,0,0,0,0.0852266274161009,0,0,0.384380134730212,0.382838137483752,0,0.464845549297286,0,0,0,1.06461206063404,0,0.9266210955196,0,0,0.316379424718726,0,0,0,0.318203247925937,0,0,0,0.117812402345686,0.404364963146632,0,0.421258456238981,0,0.243713489631284,0,0,0.141405431953713,0,0,0.66343897524122,0,0,0,0.202910376962704,0,0,0,0,0,0,0.211107635297664,0.329294892959902,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0.890894042497916,0,0,0.140669416410513,1.00177834520615,0,0,0.19924798825107,0,0,1.63629892003448,0,0.311039587661807,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.482385754501632,0,0,0,0.438770794307945,0,0,0.153900517007594,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269604531922708,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0.225980740780532,0.274083849293502,0,0.189932387867636,0,0.0801588202515337,0.213452994739353,0,0,0,0,0,0,0,0.67952103036807,1.255234155748,0,0,0.600420288709789,0,0,0,0,0.279282401272254,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.272406812223151,0,0,0.83088067605837,0,0,0.303747783290123,0,1.02447419488958,0.577000469484979,0,0.179287339332845,0.383830394638891,0,0,0,1.62899880526114,1.72844298240254,1.95952416065645,1.19730191562487,0,0,0,0,0,0,0.13223260174269,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0.366078794705889,0.1251909307065,0.573409195690071,0.554645257684261,0.124192805882767,0,0,0,0,0,0,0,0,0,0.554805861502613,0.568209015825267,0,0,2.51724075236616,0.302461847526478,0.15543720058278,0.591420599958536,0,0,0.155262956876259,0,0.265841714557995,0,0.150257608997218,1.14241563650639,0,0,0.537052785212442,0.464033759878494,0,2.40016658797892,0,0,0,0.192619830407303,0,0,0.226705925512272,0,0.244736704506468,0.358177682162975,0,0,0.353378291891762,0.192914038270915,0.168942440653073,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0.41023272848151,0,0.138314504928436,0.161475645631851,0,0,0,0,0,0.381382095467167,0,0,0,1.21023041222112,0,0,0.163771917510097,0,0.202612753855184,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0.135939465953663,0.197318320688547,0,0.111231401892069,0,0.157115589916002,0,0,0,0,0.357382720883282,0,0,0,0,0,0.17071847709395,0,0,5.7982680357977,5.87972492838188,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0.203974470572744,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.426467963801962,0.23806443146374,0,0,0,1.78212043178862,0.808468755832877,0,0,0,0,0,0.162806537221949,0,0,0,0,0.366724332548599,0,0,0.603821380773079,0 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| ||
|short_description=p13@TLN2 | |short_description=p13@TLN2 | ||
}} | }} |
Latest revision as of 11:10, 18 September 2015
Short description: | p13@TLN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_TLN2_5end |
Coexpression cluster: | C3502_Placental_schwannoma_kidney_leiomyoma_thyroid_mesenchymal_Fibroblast |
Association with transcript: | -44bp_to_ENST00000472902, uc002ald.2_5end |
EntrezGene: | TLN2 |
HGNC: | 15447 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amniotic epithelial cell | 8.76e-15 | 2 |
Schwann cell | 4.59e-11 | 2 |
placental epithelial cell | 9.10e-11 | 3 |
androgen binding protein secreting cell | 1.27e-08 | 1 |
seminiferous tubule epithelial cell | 1.27e-08 | 1 |
Sertoli cell | 1.27e-08 | 1 |
fibroblast of tunica adventitia of artery | 2.75e-08 | 4 |
fibroblast of the aortic adventitia | 2.75e-08 | 4 |
glial cell (sensu Vertebrata) | 3.95e-07 | 15 |
glial cell | 3.95e-07 | 15 |
glioblast | 3.95e-07 | 15 |
glioblast (sensu Vertebrata) | 3.95e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 1.27e-08 | 1 |
seminiferous tubule of testis | 1.27e-08 | 1 |
epithelium of male gonad | 1.27e-08 | 1 |
epithelial cord | 1.27e-08 | 1 |
sex cord | 1.27e-08 | 1 |
seminiferous tubule epithelium | 1.27e-08 | 1 |
testis sex cord | 1.27e-08 | 1 |
genital ridge | 1.27e-08 | 1 |
primitive sex cord of indifferent gonad | 1.27e-08 | 1 |
coelomic epithelium | 1.27e-08 | 1 |
uterus | 1.38e-08 | 21 |
somatic layer of lateral plate mesoderm | 1.83e-08 | 8 |
extraembryonic membrane | 2.48e-08 | 14 |
membranous layer | 2.48e-08 | 14 |
placenta | 2.75e-08 | 4 |
artery wall | 2.75e-08 | 4 |
tunica adventitia of artery | 2.75e-08 | 4 |
adventitia | 2.75e-08 | 4 |
tunica adventitia of blood vessel | 2.75e-08 | 4 |
aorta tunica adventitia | 2.75e-08 | 4 |
aorta wall | 2.75e-08 | 4 |
allantois | 2.75e-08 | 4 |
embryonic uterus | 3.48e-08 | 22 |
internal female genitalia | 3.48e-08 | 22 |
internal genitalia | 3.57e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 1.09e-22 | 3 |
leiomyoma | 1.09e-22 | 3 |
benign neoplasm | 3.61e-17 | 4 |