FFCP PHASE1:Hg19::chr1:192548540..192548575,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:192548540..192548575,+ | |||
|coexpression_cluster_id=C537 | |||
|description=CAGE_peak_at_chr1:192548540..192548575,+ | |description=CAGE_peak_at_chr1:192548540..192548575,+ | ||
|id=chr1:192548540..192548575,+ | |id=chr1:192548540..192548575,+ | ||
|ontology_enrichment_celltype=CL:0000738!1.08e-50!140;CL:0000037!7.58e-39!172;CL:0000566!7.58e-39!172;CL:0002031!8.08e-39!124;CL:0000988!3.93e-38!182;CL:0002032!1.51e-35!165;CL:0000837!1.51e-35!165;CL:0002087!1.81e-35!119;CL:0002057!1.12e-32!42;CL:0000766!3.63e-30!76;CL:0000860!7.19e-30!45;CL:0000557!1.40e-29!71;CL:0002009!2.30e-27!65;CL:0000839!3.41e-26!70;CL:0002194!1.58e-24!63;CL:0000576!1.58e-24!63;CL:0000040!1.58e-24!63;CL:0000559!1.58e-24!63;CL:0000763!1.66e-24!112;CL:0000049!1.66e-24!112;CL:0000451!3.14e-11!10;CL:0000453!3.28e-11!5;CL:0000838!2.50e-10!52;CL:0000542!4.97e-10!53;CL:0000051!4.97e-10!53;CL:0000134!6.24e-10!358;CL:0002320!2.11e-09!365;CL:0000624!9.30e-09!6;CL:0000990!3.18e-08!8;CL:0000219!1.43e-07!390 | |ontology_enrichment_celltype=CL:0000738!1.08e-50!140;CL:0000037!7.58e-39!172;CL:0000566!7.58e-39!172;CL:0002031!8.08e-39!124;CL:0000988!3.93e-38!182;CL:0002032!1.51e-35!165;CL:0000837!1.51e-35!165;CL:0002087!1.81e-35!119;CL:0002057!1.12e-32!42;CL:0000766!3.63e-30!76;CL:0000860!7.19e-30!45;CL:0000557!1.40e-29!71;CL:0002009!2.30e-27!65;CL:0000839!3.41e-26!70;CL:0002194!1.58e-24!63;CL:0000576!1.58e-24!63;CL:0000040!1.58e-24!63;CL:0000559!1.58e-24!63;CL:0000763!1.66e-24!112;CL:0000049!1.66e-24!112;CL:0000451!3.14e-11!10;CL:0000453!3.28e-11!5;CL:0000838!2.50e-10!52;CL:0000542!4.97e-10!53;CL:0000051!4.97e-10!53;CL:0000134!6.24e-10!358;CL:0002320!2.11e-09!365;CL:0000624!9.30e-09!6;CL:0000990!3.18e-08!8;CL:0000219!1.43e-07!390 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.08e-43;33!CL:0002057;2.08e-43;33!CL:0000473;1.20e-31;39!CL:0000234;1.20e-31;39!CL:0000453;1.92e-22;5!CL:0000576;2.61e-20;48!CL:0000451;1.14e-18;10!CL:0000990;3.09e-17;8!CL:0000766;6.94e-17;69!CL:0000624;5.21e-12;6!CL:0001014;1.92e-10;2!CL:0001016;1.92e-10;2!CL:0000815;4.63e-10;2!CL:0000792;4.63e-10;2!CL:0002677;4.63e-10;2!CL:0002087;1.33e-09;104!CL:0000738;9.43e-09;136!CL:0000763;3.75e-08;100!CL:0000791;3.85e-08;18!CL:0000789;3.85e-08;18!CL:0002419;3.85e-08;18!CL:0000097;4.26e-08;5!CL:0000840;2.74e-07;5!CL:0000898;5.74e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,8.00e-45,136;CL:0000557,5.00e-37,67;CL:0000860,8.60e-37,42;CL:0002057,8.60e-37,42;CL:0000766,1.28e-36,72;CL:0000037,1.01e-34,168;CL:0002032,1.56e-34,161;CL:0000837,1.56e-34,161;CL:0002031,7.83e-34,120;CL:0000763,1.77e-33,108;CL:0000049,1.77e-33,108;CL:0000988,1.56e-32,177;CL:0002009,8.36e-32,61;CL:0000473,1.40e-31,48;CL:0000234,1.40e-31,48;CL:0000839,2.29e-31,66;CL:0002194,6.82e-27,59;CL:0000576,6.82e-27,59;CL:0000040,6.82e-27,59;CL:0000559,6.82e-27,59;CL:0002087,1.28e-24,115;CL:0000453,1.39e-22,5;CL:0000451,9.62e-19,10;CL:0000990,2.93e-17,8;CL:0000624,3.97e-12,6;CL:0000134,5.38e-12,354;CL:0002320,1.35e-11,361;CL:0001014,1.93e-10,2;CL:0001016,1.93e-10,2;CL:0000219,3.48e-10,386;CL:0000815,4.54e-10,2;CL:0000792,4.54e-10,2;CL:0002677,4.54e-10,2;CL:0000048,1.85e-08,427;CL:0000723,3.19e-08,433;CL:0000791,3.44e-08,18;CL:0000789,3.44e-08,18;CL:0002420,3.44e-08,18;CL:0002419,3.44e-08,18;CL:0000790,3.44e-08,18;CL:0000097,5.14e-08,5;CL:0002028,5.14e-08,5;CL:0000034,6.47e-08,441;CL:0000840,3.08e-07,5;CL:0001029,3.08e-07,5;CL:0000898,5.66e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;2.24e-28;42!CL:0000049;1.33e-08;108!CL:0000790;3.85e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.73e-25!80;UBERON:0002390!3.19e-24!102;UBERON:0003061!3.19e-24!102;UBERON:0001474!1.95e-22!86;UBERON:0002193!6.38e-21!112;UBERON:0004765!1.85e-17!101;UBERON:0001434!1.85e-17!101;UBERON:0002405!6.67e-17!115;UBERON:0002384!3.68e-09!375;UBERON:0002204!3.79e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.77e-32,76;UBERON:0001474,3.35e-29,82;UBERON:0004765,4.38e-26,90;UBERON:0002405,4.71e-25,93;UBERON:0002390,1.79e-23,98;UBERON:0003061,1.79e-23,98;UBERON:0001434,6.93e-23,100;UBERON:0002193,9.45e-21,108;UBERON:0002204,2.48e-11,167;UBERON:0002384,4.76e-11,371;UBERON:0003081,2.65e-08,203 | |||
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| ||
|short_description=p@chr1:192548540..192548575,+ | |short_description=p@chr1:192548540..192548575,+ | ||
}} | }} |
Latest revision as of 01:40, 28 July 2015
Short description: | p@chr1:192548540..192548575, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:192548540..192548575, + |
Coexpression cluster: | C537_immature_CD14_migratory_Mast_CD4_Dendritic_Basophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.77e-32 | 76 |
bone element | 3.35e-29 | 82 |
skeletal element | 4.38e-26 | 90 |
immune system | 4.71e-25 | 93 |
hematopoietic system | 1.79e-23 | 98 |
blood island | 1.79e-23 | 98 |
skeletal system | 6.93e-23 | 100 |
hemolymphoid system | 9.45e-21 | 108 |
musculoskeletal system | 2.48e-11 | 167 |
connective tissue | 4.76e-11 | 371 |
lateral plate mesoderm | 2.65e-08 | 203 |