FFCP PHASE1:Hg19::chr1:192548520..192548535,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:192548520..192548535,+ | |||
|coexpression_cluster_id=C537 | |||
|description=CAGE_peak_at_chr1:192548520..192548535,+ | |description=CAGE_peak_at_chr1:192548520..192548535,+ | ||
|id=chr1:192548520..192548535,+ | |id=chr1:192548520..192548535,+ | ||
|ontology_enrichment_celltype=CL:0000738!1.20e-39!140;CL:0002031!1.56e-36!124;CL:0002057!1.69e-33!42;CL:0002087!6.80e-32!119;CL:0000557!5.69e-31!71;CL:0000860!1.20e-30!45;CL:0000037!5.58e-29!172;CL:0000566!5.58e-29!172;CL:0002009!1.02e-28!65;CL:0002032!2.57e-28!165;CL:0000837!2.57e-28!165;CL:0000839!1.86e-27!70;CL:0000988!1.99e-26!182;CL:0000766!4.26e-26!76;CL:0002194!9.05e-26!63;CL:0000576!9.05e-26!63;CL:0000040!9.05e-26!63;CL:0000559!9.05e-26!63;CL:0000763!2.84e-20!112;CL:0000049!2.84e-20!112;CL:0000451!8.10e-11!10;CL:0000453!8.65e-11!5;CL:0000990!1.41e-10!8;CL:0000624!5.72e-09!6;CL:0000838!6.24e-08!52;CL:0000542!1.07e-07!53;CL:0000051!1.07e-07!53 | |ontology_enrichment_celltype=CL:0000738!1.20e-39!140;CL:0002031!1.56e-36!124;CL:0002057!1.69e-33!42;CL:0002087!6.80e-32!119;CL:0000557!5.69e-31!71;CL:0000860!1.20e-30!45;CL:0000037!5.58e-29!172;CL:0000566!5.58e-29!172;CL:0002009!1.02e-28!65;CL:0002032!2.57e-28!165;CL:0000837!2.57e-28!165;CL:0000839!1.86e-27!70;CL:0000988!1.99e-26!182;CL:0000766!4.26e-26!76;CL:0002194!9.05e-26!63;CL:0000576!9.05e-26!63;CL:0000040!9.05e-26!63;CL:0000559!9.05e-26!63;CL:0000763!2.84e-20!112;CL:0000049!2.84e-20!112;CL:0000451!8.10e-11!10;CL:0000453!8.65e-11!5;CL:0000990!1.41e-10!8;CL:0000624!5.72e-09!6;CL:0000838!6.24e-08!52;CL:0000542!1.07e-07!53;CL:0000051!1.07e-07!53 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.19e-20;33!CL:0002057;2.19e-20;33!CL:0000473;2.32e-19;39!CL:0000234;2.32e-19;39!CL:0000624;5.91e-15;6!CL:0001014;1.36e-12;2!CL:0001016;1.36e-12;2!CL:0000815;8.11e-12;2!CL:0000792;8.11e-12;2!CL:0002677;8.11e-12;2!CL:0000453;5.84e-11;5!CL:0000990;2.43e-10;8!CL:0000766;5.37e-10;69!CL:0000576;1.03e-09;48!CL:0000840;3.96e-09;5!CL:0000451;1.80e-08;10!CL:0000898;3.66e-08;3!CL:0002087;3.99e-08;104!CL:0000738;9.80e-08;136!CL:0000791;1.61e-07;18!CL:0000789;1.61e-07;18!CL:0002419;1.61e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,9.15e-28,136;CL:0002031,2.20e-27,120;CL:0000557,7.28e-25,67;CL:0002009,1.12e-24,61;CL:0002087,4.70e-24,115;CL:0000473,2.61e-22,48;CL:0000234,2.61e-22,48;CL:0000037,2.23e-21,168;CL:0002032,8.79e-21,161;CL:0000837,8.79e-21,161;CL:0000988,5.38e-20,177;CL:0002194,9.06e-20,59;CL:0000576,9.06e-20,59;CL:0000040,9.06e-20,59;CL:0000559,9.06e-20,59;CL:0000839,9.47e-20,66;CL:0000860,2.31e-19,42;CL:0002057,2.31e-19,42;CL:0000766,8.00e-18,72;CL:0000763,1.01e-15,108;CL:0000049,1.01e-15,108;CL:0000624,3.90e-15,6;CL:0001014,1.44e-12,2;CL:0001016,1.44e-12,2;CL:0000815,4.19e-12,2;CL:0000792,4.19e-12,2;CL:0002677,4.19e-12,2;CL:0000453,6.05e-11,5;CL:0000990,2.64e-10,8;CL:0000840,4.37e-09,5;CL:0001029,4.37e-09,5;CL:0000451,1.93e-08,10;CL:0000898,2.37e-08,3;CL:0000791,1.35e-07,18;CL:0000789,1.35e-07,18;CL:0002420,1.35e-07,18;CL:0002419,1.35e-07,18;CL:0000790,1.35e-07,18;CL:0000134,4.89e-07,354;CL:0002320,8.72e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;3.68e-13;42!UBERON:0006241;2.50e-08;3!UBERON:0003057;2.50e-08;3!CL:0000790;1.61e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.21e-26!80;UBERON:0001474!1.30e-23!86;UBERON:0002390!3.01e-23!102;UBERON:0003061!3.01e-23!102;UBERON:0002193!4.28e-20!112;UBERON:0004765!1.79e-18!101;UBERON:0001434!1.79e-18!101;UBERON:0002405!5.13e-18!115;UBERON:0002204!2.20e-08!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0002240;2.50e-08;3!UBERON:0005174;2.50e-08;3!UBERON:0001137;2.50e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.81e-21,76;UBERON:0001474,1.29e-19,82;UBERON:0002390,1.14e-17,98;UBERON:0003061,1.14e-17,98;UBERON:0004765,1.59e-17,90;UBERON:0002405,7.82e-17,93;UBERON:0002193,1.20e-15,108;UBERON:0001434,2.22e-15,100;UBERON:0002240,2.64e-08,3;UBERON:0005174,2.64e-08,3;UBERON:0001137,2.64e-08,3;UBERON:0002204,1.23e-07,167 | |||
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| ||
|short_description=p@chr1:192548520..192548535,+ | |short_description=p@chr1:192548520..192548535,+ | ||
}} | }} |
Latest revision as of 01:40, 28 July 2015
Short description: | p@chr1:192548520..192548535, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:192548520..192548535, + |
Coexpression cluster: | C537_immature_CD14_migratory_Mast_CD4_Dendritic_Basophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.81e-21 | 76 |
bone element | 1.29e-19 | 82 |
hematopoietic system | 1.14e-17 | 98 |
blood island | 1.14e-17 | 98 |
skeletal element | 1.59e-17 | 90 |
immune system | 7.82e-17 | 93 |
hemolymphoid system | 1.20e-15 | 108 |
skeletal system | 2.22e-15 | 100 |
spinal cord | 2.64e-08 | 3 |
dorsal region element | 2.64e-08 | 3 |
dorsum | 2.64e-08 | 3 |
musculoskeletal system | 1.23e-07 | 167 |