FFCP PHASE1:Hg19::chr11:46369077..46369114,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:46369077..46369114,+
|short_description=p2@DGKZ
|description=CAGE_peak_2_at_DGKZ_5end
|association_with_transcript=4bp_to_ENST00000533376_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8525 | |EntrezGene=8525 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2857 | |HGNC=2857 | ||
|TSSclassifier=strong | |||
|UniProt=E9PK94 | |UniProt=E9PK94 | ||
|association_with_transcript=4bp_to_ENST00000533376_5end | |||
|cluster_id=chr11:46369077..46369114,+ | |||
|description=CAGE_peak_2_at_DGKZ_5end | |||
|id=chr11:46369077..46369114,+ | |||
|ontology_enrichment_celltype=CL:0000084!5.92e-13!25;CL:0000827!5.92e-13!25;CL:0000791!7.08e-12!18;CL:0000789!7.08e-12!18;CL:0002420!7.08e-12!18;CL:0002419!7.08e-12!18;CL:0000790!7.08e-12!18;CL:0000542!3.55e-08!53;CL:0000051!3.55e-08!53;CL:0000625!4.32e-08!11;CL:0000838!6.26e-08!52 | |||
|ontology_enrichment_celltype_v019=CL:0000084;4.08e-13;25!CL:0000791;5.14e-12;18!CL:0000789;5.14e-12;18!CL:0002419;5.14e-12;18!CL:0000625;3.60e-08;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,5.92e-13,25;CL:0000827,5.92e-13,25;CL:0000791,7.07e-12,18;CL:0000789,7.07e-12,18;CL:0002420,7.07e-12,18;CL:0002419,7.07e-12,18;CL:0000790,7.07e-12,18;CL:0000542,3.58e-08,53;CL:0000051,3.58e-08,53;CL:0000625,4.32e-08,11;CL:0000838,6.33e-08,52 | |||
|ontology_enrichment_development_v019=CL:0000790;5.14e-12;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003080!2.57e-14!42;UBERON:0001049!3.57e-14!57;UBERON:0005068!3.57e-14!57;UBERON:0006241!3.57e-14!57;UBERON:0007135!3.57e-14!57;UBERON:0001893!4.02e-14!34;UBERON:0002780!5.14e-14!41;UBERON:0001890!5.14e-14!41;UBERON:0006240!5.14e-14!41;UBERON:0001869!1.14e-13!32;UBERON:0002791!1.70e-13!33;UBERON:0002020!2.41e-13!34;UBERON:0003528!2.41e-13!34;UBERON:0007023!5.22e-13!115;UBERON:0002619!4.12e-12!22;UBERON:0000955!4.55e-12!69;UBERON:0006238!4.55e-12!69;UBERON:0002616!2.08e-11!59;UBERON:0001017!6.27e-11!82;UBERON:0001950!6.48e-11!20;UBERON:0003056!9.72e-11!61;UBERON:0000956!1.56e-10!25;UBERON:0000203!1.56e-10!25;UBERON:0005743!9.13e-10!86;UBERON:0003075!1.37e-09!86;UBERON:0007284!1.37e-09!86;UBERON:0000153!6.53e-09!129;UBERON:0007811!6.53e-09!129;UBERON:0002346!6.56e-09!90;UBERON:0000033!2.51e-08!123;UBERON:0000073!4.17e-07!94;UBERON:0001016!4.17e-07!94 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.25e-12;32!UBERON:0001893;1.57e-12;34!UBERON:0002619;2.29e-12;22!UBERON:0002791;3.15e-12;32!UBERON:0003528;9.16e-12;34!UBERON:0002020;9.16e-12;34!UBERON:0001950;3.75e-11;20!UBERON:0000956;1.10e-10;25!UBERON:0000203;1.10e-10;25!UBERON:0002780;1.20e-10;41!UBERON:0001890;1.20e-10;41!UBERON:0000073;1.59e-08;53!UBERON:0002616;1.59e-08;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.18e-14,53;UBERON:0002616,2.18e-14,53;UBERON:0001893,4.02e-14,34;UBERON:0002780,5.13e-14,41;UBERON:0001890,5.13e-14,41;UBERON:0003080,5.13e-14,41;UBERON:0006240,5.13e-14,41;UBERON:0001049,7.10e-14,56;UBERON:0005068,7.10e-14,56;UBERON:0006241,7.10e-14,56;UBERON:0007135,7.10e-14,56;UBERON:0001869,1.14e-13,32;UBERON:0003528,2.40e-13,34;UBERON:0002020,2.40e-13,34;UBERON:0002791,3.41e-13,32;UBERON:0007023,1.29e-12,114;UBERON:0002619,4.12e-12,22;UBERON:0000955,8.70e-12,68;UBERON:0006238,8.70e-12,68;UBERON:0001950,6.47e-11,20;UBERON:0001017,1.15e-10,81;UBERON:0000956,1.56e-10,25;UBERON:0000203,1.56e-10,25;UBERON:0010371,2.44e-10,104;UBERON:0003056,8.44e-10,61;UBERON:0003075,4.25e-09,82;UBERON:0007284,4.25e-09,82;UBERON:0002346,2.00e-08,86;UBERON:0001016,1.00e-07,89 | |||
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| ||
|short_description=p2@DGKZ | |||
}} | }} |
Latest revision as of 02:48, 18 September 2015
Short description: | p2@DGKZ |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_DGKZ_5end |
Coexpression cluster: | NA |
Association with transcript: | 4bp_to_ENST00000533376_5end |
EntrezGene: | DGKZ |
HGNC: | 2857 |
UniProt: | E9PK94 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 5.92e-13 | 25 |
pro-T cell | 5.92e-13 | 25 |
mature alpha-beta T cell | 7.07e-12 | 18 |
alpha-beta T cell | 7.07e-12 | 18 |
immature T cell | 7.07e-12 | 18 |
mature T cell | 7.07e-12 | 18 |
immature alpha-beta T cell | 7.07e-12 | 18 |
lymphocyte | 3.58e-08 | 53 |
common lymphoid progenitor | 3.58e-08 | 53 |
CD8-positive, alpha-beta T cell | 4.32e-08 | 11 |
lymphoid lineage restricted progenitor cell | 6.33e-08 | 52 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 2.18e-14 | 53 |
regional part of brain | 2.18e-14 | 53 |
telencephalon | 4.02e-14 | 34 |
regional part of forebrain | 5.13e-14 | 41 |
forebrain | 5.13e-14 | 41 |
anterior neural tube | 5.13e-14 | 41 |
future forebrain | 5.13e-14 | 41 |
neural tube | 7.10e-14 | 56 |
neural rod | 7.10e-14 | 56 |
future spinal cord | 7.10e-14 | 56 |
neural keel | 7.10e-14 | 56 |
cerebral hemisphere | 1.14e-13 | 32 |
brain grey matter | 2.40e-13 | 34 |
gray matter | 2.40e-13 | 34 |
regional part of telencephalon | 3.41e-13 | 32 |
adult organism | 1.29e-12 | 114 |
regional part of cerebral cortex | 4.12e-12 | 22 |
brain | 8.70e-12 | 68 |
future brain | 8.70e-12 | 68 |
neocortex | 6.47e-11 | 20 |
central nervous system | 1.15e-10 | 81 |
cerebral cortex | 1.56e-10 | 25 |
pallium | 1.56e-10 | 25 |
ecto-epithelium | 2.44e-10 | 104 |
pre-chordal neural plate | 8.44e-10 | 61 |
neural plate | 4.25e-09 | 82 |
presumptive neural plate | 4.25e-09 | 82 |
neurectoderm | 2.00e-08 | 86 |
nervous system | 1.00e-07 | 89 |