FFCP PHASE1:Hg19::chr11:46342256..46342269,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr11:46342256..46342269,+
|short_description=p@chr11:46342256..46342269,+
|description=CAGE_peak_at_chr11:46342256..46342269,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:46342256..46342269,+ | |||
|coexpression_cluster_id=C882 | |||
|description=CAGE_peak_at_chr11:46342256..46342269,+ | |||
|id=chr11:46342256..46342269,+ | |||
|ontology_enrichment_celltype=CL:0000055!8.69e-30!180;CL:0000057!1.29e-21!75;CL:0000183!2.47e-10!59;CL:0000187!2.87e-10!54;CL:0000680!4.51e-10!57;CL:0000056!4.51e-10!57;CL:0000355!4.51e-10!57;CL:0002620!6.36e-10!23;CL:0000393!5.26e-09!60;CL:0000211!5.26e-09!60;CL:0000192!8.56e-09!42;CL:0000514!8.56e-09!42;CL:0002334!1.61e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0002620;6.01e-11;23!CL:0000192;4.53e-09;43!CL:0000359;1.21e-07;32!CL:0002622;3.89e-07;3!CL:0000048;6.37e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,6.19e-15,76;CL:0000192,8.14e-12,43;CL:0000514,8.14e-12,43;CL:0000048,2.30e-11,427;CL:0002620,4.77e-11,23;CL:0000723,6.55e-11,433;CL:0000034,2.51e-10,441;CL:0000187,3.91e-10,55;CL:0000680,2.58e-09,58;CL:0000056,2.58e-09,58;CL:0000355,2.58e-09,58;CL:0000393,1.40e-08,61;CL:0000211,1.40e-08,61;CL:0000359,8.87e-08,32;CL:0002622,5.00e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000514;4.53e-09;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;5.12e-07;3!DOID:127;5.12e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,4.27e-07,3;DOID:127,4.27e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0000914!2.79e-11!83;UBERON:0002329!2.79e-11!83;UBERON:0003077!2.79e-11!83;UBERON:0003059!2.79e-11!83;UBERON:0007282!2.79e-11!83;UBERON:0009618!2.79e-11!83;UBERON:0007285!2.79e-11!83;UBERON:0004290!5.53e-11!70;UBERON:0001134!4.63e-10!61;UBERON:0002036!4.63e-10!61;UBERON:0003082!4.63e-10!61;UBERON:0000486!2.37e-09!82;UBERON:0002385!2.68e-09!63;UBERON:0001015!2.68e-09!63;UBERON:0000383!2.68e-09!63;UBERON:0005256!2.95e-09!143;UBERON:0004458!5.70e-08!49;UBERON:0003102!1.17e-07!95;UBERON:0002323!1.34e-07!46;UBERON:0002199!4.04e-07!45;UBERON:0002416!4.04e-07!45;UBERON:0000475!5.67e-07!365;UBERON:0002097!5.97e-07!40;UBERON:0005156!7.69e-07!59;UBERON:0000990!7.69e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;6.19e-07;41!UBERON:0003104;8.94e-07;7!UBERON:0009142;8.94e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,1.24e-09,73;UBERON:0001134,3.09e-09,62;UBERON:0002036,3.09e-09,62;UBERON:0003082,3.09e-09,62;UBERON:0002329,3.92e-09,71;UBERON:0003059,3.92e-09,71;UBERON:0007282,3.92e-09,71;UBERON:0004290,3.92e-09,71;UBERON:0009618,3.92e-09,71;UBERON:0002097,5.49e-09,41;UBERON:0003077,6.43e-09,72;UBERON:0007285,6.43e-09,72;UBERON:0002385,9.13e-09,64;UBERON:0001015,9.13e-09,64;UBERON:0000383,9.13e-09,64;UBERON:0007503,9.35e-08,78;UBERON:0002199,1.52e-07,46;UBERON:0002416,1.52e-07,46;UBERON:0003102,2.41e-07,99;UBERON:0005256,3.11e-07,122;UBERON:0000486,6.27e-07,83;UBERON:0003104,7.22e-07,160;UBERON:0009142,7.22e-07,160 | |||
|phase1_expression=0.54503513781167,1.92690471501885,2.67813367782345,0,0.446961094427288,0,0,0,0.261185628199839,0,0,0.655324116390517,1.31883489114227,0.247532705920093,0.331397375727916,1.34465029290355,1.80808358407193,2.19093027116212,1.46379839637152,0.369363174230364,0.408001382488506,0.626909442956176,0,0.410623275218653,0,0,0,0,0,0,0.464448369948228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.511450247374121,0.722878304769133,0.50133791063589,1.15877215168659,0.795285947051099,0,0.0945348171640679,0,0,0.130979075497713,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.506522046658319,0.529636723252875,1.43418310374407,2.12801029319014,0,0,0.74000264525148,0.311211035399766,0.134710672069688,0.326923806226917,1.81628913173918,0.576175924479999,0.468642863667593,0.624320153660641,0,0.149448680551801,0.117434498643765,0.161872944368132,0.140450806702248,0,0.737005903870608,0.929932030581889,2.37600571456411,2.96720315134268,5.46096817162816,4.31170885089743,0,0.875829639103749,0,0,1.83892677479412,0.300476117813194,0.453728732640084,2.51145489964407,2.13557388818567,1.48352330811693,0.900273288253207,1.95799805553034,0.772921620136887,2.79175284497385,2.02531598689519,2.43592512902997,3.02920529092937,1.65689817556139,2.7479829659198,2.84007674013291,2.01504196455281,1.18692414617341,0,0,0,0.121973706129595,0,0,0.207322110030741,0.252320850875628,0,1.56449532329816,2.57296375277154,0,1.85747171212792,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,1.47008711385542,0,0,0,0,0.122988438543114,0.343135620597051,0,0,0,0.185176890317059,0.651616610620649,0,0,0.231860809950154,0.469634776943287,0,0,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0.4400297149257,1.68053230485111,0,0,2.12750493267896,3.12022310734098,0.514414748524284,1.41849132023278,0.799266537048298,3.14551586047925,5.96883765930587,0.823240336780769,0.65147236858747,0.710783897485092,0,0.301439377059586,0,0.199945982364114,0,0,0,2.39624855491583,3.44585807502342,1.42636905040718,0.144781306667579,0.205476322550383,0,0,0,0,0,1.01637849688985,0,0,0,0,0,0,0,0.36807447515742,2.50085260529839,0.271265023699736,1.03985430765404,6.95873056308931,2.20783381047509,1.63997980989798,0.300946099727719,0,1.03473071292505,5.31380478828349,0,1.56390506042549,0.783204629850962,0.686286847621712,0,0,0,0,0,2.41912234663744,1.24053903909388,0.61384789315225,1.68396056659844,1.15325234330131,0.511707249066704,2.73451665944133,1.48418066444991,0.925258162815933,0.887808626565635,0.328508624055237,3.11552657510173,0.581051892299796,0.241718899183244,0,0,2.06666006696292,4.37018803216121,4.45823010862042,0,0,0,0,0,0,0,0.647747748306418,0,0.270946437543853,0,0,0,0.223874754722178,0,0,0,0.656029291399411,0.325378394664303,0,1.92295876118521,1.40266149865,0.574265537996172,0.650060246036521,1.6068392984416,0.48335359146061,0,0,0.413509717453592,0.429680979473094,0.435050081742686,0.170453254832202,1.78064071293475,0.165284915360978,0,0,0,5.57814659156743,5.03699754929024,0,0.924100740528266,0,0,0,0,0,0,0.571890581771475,2.303080121802,1.71175595213568,0,2.35484592059769,0.359744915166629,0.823611089208164,0.235624804691373,0.808729926293264,0,0,0.975267478179181,2.68084838594413,2.11300293513511,2.04749867111979,5.37340641424108,1.13008116620243,1.65409603063837,0,0,3.47265320560013,1.31178950409327,0.608731130888112,1.8589409885985,0.845086807596724,1.29070216983646,1.17898849215745,0,0.354761064070598,0.844430541190656,0.987884678879706,0,0.349934720244983,0,0,0,0.188287601553558,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.427296284509893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0.994147647766298,0,0.111308705022906,0,0,0.19924798825107,0,0,0.511343412510774,0.123084805461069,2.17727711363265,0,0.537063524026827,0,0.197286811273867,0,0,0,0,0,0,0.262379999988587,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.307801034015188,0.113942055847001,0,0,0,0,0.915975934018623,0,0,0,0,0,0.392125068635479,0.335643173951685,0,0,0,0,0.282706142867882,0,0,0.0884575645033392,0,0,0,0,0,0.802577647298789,0,0,0,0.485560759068186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0.51595809741485,0,0,0,0,0,0,0.137041924646751,0,0,0.195551382734803,1.28254112402454,1.70762395791482,0,0.288180834308212,0,0.171594997861965,0,0.124252535565433,0,0.67952103036807,1.15063130943567,0.203996435272644,0.866851769704557,0,0,0,1.71906176567983,0,0,0.458320848023367,0,0.199679000498991,0,0.223171457441873,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0.137539436597234,0.415440338029185,0,0,0,0,0,0.0524545881349981,0.211200673038813,0,0,0,0.662091970365432,0.25426853765475,3.25799761052228,3.45688596480507,2.61269888087527,0,0,1.36310417428337,0.113312091520126,0,0,0,0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| ||
|short_description=p@chr11:46342256..46342269,+ | |||
}} | }} |
Latest revision as of 22:25, 23 July 2015
Short description: | p@chr11:46342256..46342269, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:46342256..46342269, + |
Coexpression cluster: | C882_Olfactory_Mesenchymal_Smooth_tenocyte_Osteoblast_Prostate_Fibroblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 6.19e-15 | 76 |
smooth muscle cell | 8.14e-12 | 43 |
smooth muscle myoblast | 8.14e-12 | 43 |
multi fate stem cell | 2.30e-11 | 427 |
skin fibroblast | 4.77e-11 | 23 |
somatic stem cell | 6.55e-11 | 433 |
stem cell | 2.51e-10 | 441 |
muscle cell | 3.91e-10 | 55 |
muscle precursor cell | 2.58e-09 | 58 |
myoblast | 2.58e-09 | 58 |
multi-potent skeletal muscle stem cell | 2.58e-09 | 58 |
electrically responsive cell | 1.40e-08 | 61 |
electrically active cell | 1.40e-08 | 61 |
vascular associated smooth muscle cell | 8.87e-08 | 32 |
prostate stromal cell | 5.00e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
dense mesenchyme tissue | 1.24e-09 | 73 |
skeletal muscle tissue | 3.09e-09 | 62 |
striated muscle tissue | 3.09e-09 | 62 |
myotome | 3.09e-09 | 62 |
somite | 3.92e-09 | 71 |
presomitic mesoderm | 3.92e-09 | 71 |
presumptive segmental plate | 3.92e-09 | 71 |
dermomyotome | 3.92e-09 | 71 |
trunk paraxial mesoderm | 3.92e-09 | 71 |
skin of body | 5.49e-09 | 41 |
paraxial mesoderm | 6.43e-09 | 72 |
presumptive paraxial mesoderm | 6.43e-09 | 72 |
muscle tissue | 9.13e-09 | 64 |
musculature | 9.13e-09 | 64 |
musculature of body | 9.13e-09 | 64 |
epithelial vesicle | 9.35e-08 | 78 |
integument | 1.52e-07 | 46 |
integumental system | 1.52e-07 | 46 |
surface structure | 2.41e-07 | 99 |
trunk mesenchyme | 3.11e-07 | 122 |
multilaminar epithelium | 6.27e-07 | 83 |
mesenchyme | 7.22e-07 | 160 |
entire embryonic mesenchyme | 7.22e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 4.27e-07 | 3 |
leiomyoma | 4.27e-07 | 3 |