FFCP PHASE1:Hg19::chr15:50647652..50647697,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100129387 | |EntrezGene=100129387 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000499624,uc001zyi.2_5end | |association_with_transcript=0bp_to_ENST00000499624,uc001zyi.2_5end | ||
|cluster_id=chr15:50647652..50647697,+ | |||
|description=CAGE_peak_1_at_LOC100129387_5end | |description=CAGE_peak_1_at_LOC100129387_5end | ||
|id=chr15:50647652..50647697,+ | |id=chr15:50647652..50647697,+ | ||
|ontology_enrichment_celltype=CL:0000542!9.17e-17!53;CL:0000051!9.17e-17!53;CL:0000838!1.82e-16!52;CL:0000945!3.08e-10!24;CL:0000826!3.08e-10!24;CL:0000236!9.10e-08!14;CL:0000084!1.19e-07!25;CL:0000827!1.19e-07!25;CL:0000791!7.66e-07!18;CL:0000789!7.66e-07!18;CL:0002420!7.66e-07!18;CL:0002419!7.66e-07!18;CL:0000790!7.66e-07!18 | |ontology_enrichment_celltype=CL:0000542!9.17e-17!53;CL:0000051!9.17e-17!53;CL:0000838!1.82e-16!52;CL:0000945!3.08e-10!24;CL:0000826!3.08e-10!24;CL:0000236!9.10e-08!14;CL:0000084!1.19e-07!25;CL:0000827!1.19e-07!25;CL:0000791!7.66e-07!18;CL:0000789!7.66e-07!18;CL:0002420!7.66e-07!18;CL:0002419!7.66e-07!18;CL:0000790!7.66e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000542;1.24e-10;53!CL:0000945;1.93e-10;24!CL:0000236;6.63e-08;13!CL:0000084;1.03e-07;25!CL:0000791;7.58e-07;18!CL:0000789;7.58e-07;18!CL:0002419;7.58e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,9.04e-17,53;CL:0000051,9.04e-17,53;CL:0000838,1.80e-16,52;CL:0000945,3.05e-10,24;CL:0000826,3.05e-10,24;CL:0000236,9.05e-08,14;CL:0000084,1.18e-07,25;CL:0000827,1.18e-07,25;CL:0000791,7.62e-07,18;CL:0000789,7.62e-07,18;CL:0002420,7.62e-07,18;CL:0002419,7.62e-07,18;CL:0000790,7.62e-07,18 | |||
|ontology_enrichment_development_v019=CL:0000051;1.24e-10;53!CL:0000790;7.58e-07;18 | |||
|ontology_enrichment_disease=DOID:2531!1.28e-07!51;DOID:0060083!1.28e-07!51 | |ontology_enrichment_disease=DOID:2531!1.28e-07!51;DOID:0060083!1.28e-07!51 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.34e-07,51;DOID:0060083,1.34e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.65e-08!57;UBERON:0005068!1.65e-08!57;UBERON:0006241!1.65e-08!57;UBERON:0007135!1.65e-08!57;UBERON:0001017!2.25e-07!82;UBERON:0002780!2.89e-07!41;UBERON:0001890!2.89e-07!41;UBERON:0006240!2.89e-07!41;UBERON:0000073!3.20e-07!94;UBERON:0001016!3.20e-07!94;UBERON:0003080!7.57e-07!42 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,6.46e-09,56;UBERON:0005068,6.46e-09,56;UBERON:0006241,6.46e-09,56;UBERON:0007135,6.46e-09,56;UBERON:0001016,2.60e-08,89;UBERON:0000073,2.77e-08,53;UBERON:0002616,2.77e-08,53;UBERON:0001017,1.15e-07,81;UBERON:0002780,2.88e-07,41;UBERON:0001890,2.88e-07,41;UBERON:0003080,2.88e-07,41;UBERON:0006240,2.88e-07,41 | |||
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| ||
|short_description=p1@LOC100129387 | |short_description=p1@LOC100129387 | ||
}} | }} |
Latest revision as of 23:43, 17 September 2015
Short description: | p1@LOC100129387 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC100129387_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000499624, uc001zyi.2_5end |
EntrezGene: | LOC100129387 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 9.04e-17 | 53 |
common lymphoid progenitor | 9.04e-17 | 53 |
lymphoid lineage restricted progenitor cell | 1.80e-16 | 52 |
lymphocyte of B lineage | 3.05e-10 | 24 |
pro-B cell | 3.05e-10 | 24 |
B cell | 9.05e-08 | 14 |
T cell | 1.18e-07 | 25 |
pro-T cell | 1.18e-07 | 25 |
mature alpha-beta T cell | 7.62e-07 | 18 |
alpha-beta T cell | 7.62e-07 | 18 |
immature T cell | 7.62e-07 | 18 |
mature T cell | 7.62e-07 | 18 |
immature alpha-beta T cell | 7.62e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
neural tube | 6.46e-09 | 56 |
neural rod | 6.46e-09 | 56 |
future spinal cord | 6.46e-09 | 56 |
neural keel | 6.46e-09 | 56 |
nervous system | 2.60e-08 | 89 |
regional part of nervous system | 2.77e-08 | 53 |
regional part of brain | 2.77e-08 | 53 |
central nervous system | 1.15e-07 | 81 |
regional part of forebrain | 2.88e-07 | 41 |
forebrain | 2.88e-07 | 41 |
anterior neural tube | 2.88e-07 | 41 |
future forebrain | 2.88e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.34e-07 | 51 |
immune system cancer | 1.34e-07 | 51 |