FFCP PHASE1:Hg19::chr1:167666666..167666680,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=92241 | |EntrezGene=92241 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=28310 | |HGNC=28310 | ||
|TSSclassifier=strong | |||
|UniProt=Q6JBY9 | |UniProt=Q6JBY9 | ||
|association_with_transcript=40bp_to_BC013186_5end | |association_with_transcript=40bp_to_BC013186_5end | ||
|cluster_id=chr1:167666666..167666680,+ | |||
|coexpression_cluster_id=C138 | |||
|description=CAGE_peak_4_at_RCSD1_5end | |description=CAGE_peak_4_at_RCSD1_5end | ||
|id=chr1:167666666..167666680,+ | |id=chr1:167666666..167666680,+ | ||
|ontology_enrichment_celltype=CL:0000988!1.13e-32!182;CL:0000037!1.52e-32!172;CL:0000566!1.52e-32!172;CL:0002087!4.70e-30!119;CL:0002032!1.17e-29!165;CL:0000837!1.17e-29!165;CL:0000738!1.53e-29!140;CL:0002031!3.40e-26!124;CL:0000542!5.03e-21!53;CL:0000051!5.03e-21!53;CL:0000838!5.45e-20!52;CL:0002057!5.98e-12!42;CL:0000763!3.41e-11!112;CL:0000049!3.41e-11!112;CL:0000945!5.84e-11!24;CL:0000826!5.84e-11!24;CL:0000860!9.82e-11!45;CL:0000766!2.13e-09!76;CL:0000839!4.74e-09!70;CL:0000084!4.76e-09!25;CL:0000827!4.76e-09!25;CL:0000080!5.61e-09!6;CL:0000557!8.01e-09!71;CL:0002194!2.78e-08!63;CL:0000576!2.78e-08!63;CL:0000040!2.78e-08!63;CL:0000559!2.78e-08!63;CL:0002009!7.79e-08!65;CL:0000134!3.68e-07!358;CL:0000236!5.64e-07!14;CL:0000791!6.04e-07!18;CL:0000789!6.04e-07!18;CL:0002420!6.04e-07!18;CL:0002419!6.04e-07!18;CL:0000790!6.04e-07!18 | |ontology_enrichment_celltype=CL:0000988!1.13e-32!182;CL:0000037!1.52e-32!172;CL:0000566!1.52e-32!172;CL:0002087!4.70e-30!119;CL:0002032!1.17e-29!165;CL:0000837!1.17e-29!165;CL:0000738!1.53e-29!140;CL:0002031!3.40e-26!124;CL:0000542!5.03e-21!53;CL:0000051!5.03e-21!53;CL:0000838!5.45e-20!52;CL:0002057!5.98e-12!42;CL:0000763!3.41e-11!112;CL:0000049!3.41e-11!112;CL:0000945!5.84e-11!24;CL:0000826!5.84e-11!24;CL:0000860!9.82e-11!45;CL:0000766!2.13e-09!76;CL:0000839!4.74e-09!70;CL:0000084!4.76e-09!25;CL:0000827!4.76e-09!25;CL:0000080!5.61e-09!6;CL:0000557!8.01e-09!71;CL:0002194!2.78e-08!63;CL:0000576!2.78e-08!63;CL:0000040!2.78e-08!63;CL:0000559!2.78e-08!63;CL:0002009!7.79e-08!65;CL:0000134!3.68e-07!358;CL:0000236!5.64e-07!14;CL:0000791!6.04e-07!18;CL:0000789!6.04e-07!18;CL:0002420!6.04e-07!18;CL:0002419!6.04e-07!18;CL:0000790!6.04e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000785;2.16e-26;1!CL:0000819;2.16e-26;1!CL:0000226;1.53e-09;3!CL:0000842;1.53e-09;3!CL:0000236;1.22e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000819,2.16e-26,1;CL:0000785,6.43e-14,2;CL:0000955,6.43e-14,2;CL:0000818,6.43e-14,2;CL:0000954,6.43e-14,2;CL:0000816,6.43e-14,2;CL:0000817,1.01e-09,3;CL:0000226,1.30e-09,3;CL:0000842,1.30e-09,3;CL:0000236,4.19e-08,14 | |||
|ontology_enrichment_development_v019=CL:0000954;6.43e-14;2!UBERON:0006965;1.21e-13;2 | |||
|ontology_enrichment_disease=DOID:2531!2.95e-12!51;DOID:0060083!2.95e-12!51;DOID:1240!1.44e-08!39 | |||
|ontology_enrichment_disease_v019=DOID:0060073;2.16e-26;1!DOID:8675;2.16e-26;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,2.16e-26,1;DOID:8675,2.16e-26,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!3.03e-17!102;UBERON:0003061!3.03e-17!102;UBERON:0002193!1.24e-15!112;UBERON:0000178!6.89e-09!15;UBERON:0000179!6.89e-09!15;UBERON:0000463!6.89e-09!15;UBERON:0002371!1.05e-07!80;UBERON:0004177!1.57e-07!7;UBERON:0002405!5.25e-07!115;UBERON:0002370!6.44e-07!4;UBERON:0005058!6.44e-07!4;UBERON:0009113!6.44e-07!4;UBERON:0003295!6.44e-07!4;UBERON:0005562!6.44e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001723;1.53e-09;3!UBERON:0001033;1.53e-09;3!UBERON:0000178;1.37e-07;15!UBERON:0000179;1.37e-07;15!UBERON:0000463;1.37e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,1.54e-09,3;UBERON:0001033,1.54e-09,3;UBERON:0010056,1.54e-09,3;UBERON:0000178,1.27e-07,15;UBERON:0000179,1.27e-07,15;UBERON:0000463,1.27e-07,15 | |||
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| ||
|short_description=p4@RCSD1 | |short_description=p4@RCSD1 | ||
}} | }} |
Latest revision as of 11:32, 18 September 2015
Short description: | p4@RCSD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RCSD1_5end |
Coexpression cluster: | C138_diffuse_Burkitt_lymphangiectasia_lymphoma_acute_CD19_pineal |
Association with transcript: | 40bp_to_BC013186_5end |
EntrezGene: | RCSD1 |
HGNC: | 28310 |
UniProt: | Q6JBY9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B-1 B cell | 2.16e-26 | 1 |
mature B cell | 6.43e-14 | 2 |
pre-B-II cell | 6.43e-14 | 2 |
transitional stage B cell | 6.43e-14 | 2 |
small pre-B-II cell | 6.43e-14 | 2 |
immature B cell | 6.43e-14 | 2 |
precursor B cell | 1.01e-09 | 3 |
single nucleate cell | 1.30e-09 | 3 |
mononuclear cell | 1.30e-09 | 3 |
B cell | 4.19e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
tongue | 1.54e-09 | 3 |
gustatory system | 1.54e-09 | 3 |
future tongue | 1.54e-09 | 3 |
blood | 1.27e-07 | 15 |
haemolymphatic fluid | 1.27e-07 | 15 |
organism substance | 1.27e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 2.16e-26 | 1 |
lymphosarcoma | 2.16e-26 | 1 |