FFCP PHASE1:Hg19::chr1:164528975..164528998,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5087 | |EntrezGene=5087 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8632 | |HGNC=8632 | ||
|TSSclassifier=strong | |||
|UniProt=F5H4U9 | |UniProt=F5H4U9 | ||
|association_with_transcript=-61bp_to_ENST00000367897,ENST00000401534,ENST00000498497,ENST00000540236,ENST00000559240_5end | |association_with_transcript=-61bp_to_ENST00000367897,ENST00000401534,ENST00000498497,ENST00000540236,ENST00000559240_5end | ||
|cluster_id=chr1:164528975..164528998,+ | |||
|coexpression_cluster_id=C2537 | |||
|description=CAGE_peak_13_at_PBX1_5end | |description=CAGE_peak_13_at_PBX1_5end | ||
|id=chr1:164528975..164528998,+ | |id=chr1:164528975..164528998,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!9.19e-21!86;UBERON:0001017!2.45e-20!82;UBERON:0000073!5.69e-20!94;UBERON:0001016!5.69e-20!94;UBERON:0002346!2.46e-18!90;UBERON:0003075!1.91e-17!86;UBERON:0007284!1.91e-17!86;UBERON:0001049!1.32e-15!57;UBERON:0005068!1.32e-15!57;UBERON:0006241!1.32e-15!57;UBERON:0007135!1.32e-15!57;UBERON:0000955!4.58e-15!69;UBERON:0006238!4.58e-15!69;UBERON:0007023!4.77e-15!115;UBERON:0003056!2.89e-14!61;UBERON:0000924!1.39e-13!173;UBERON:0006601!1.39e-13!173;UBERON:0002616!2.82e-13!59;UBERON:0000956!3.81e-13!25;UBERON:0000203!3.81e-13!25;UBERON:0002780!4.93e-13!41;UBERON:0001890!4.93e-13!41;UBERON:0006240!4.93e-13!41;UBERON:0001869!7.17e-13!32;UBERON:0004121!8.43e-13!169;UBERON:0001893!1.33e-12!34;UBERON:0003080!2.05e-12!42;UBERON:0000481!2.85e-12!347;UBERON:0002020!4.92e-12!34;UBERON:0003528!4.92e-12!34;UBERON:0000475!5.13e-12!365;UBERON:0002791!5.20e-12!33;UBERON:0000153!5.48e-12!129;UBERON:0007811!5.48e-12!129;UBERON:0000033!6.33e-12!123;UBERON:0002619!1.18e-11!22;UBERON:0001950!4.42e-11!20;UBERON:0000483!8.58e-10!309;UBERON:0000477!1.17e-09!286;UBERON:0000062!1.32e-09!511;UBERON:0000468!1.57e-09!659;UBERON:0000119!2.48e-09!312;UBERON:0000064!4.84e-09!219;UBERON:0000922!2.00e-08!612;UBERON:0004111!6.31e-08!241;UBERON:0003101!1.60e-07!22;UBERON:0000079!1.60e-07!22;UBERON:0003135!5.61e-07!11;UBERON:0000025!5.65e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0003135;1.04e-11;11!UBERON:0000922;1.12e-10;49!UBERON:0003101;5.96e-10;22!UBERON:0000079;5.96e-10;22!UBERON:0005904;3.54e-09;4!UBERON:0001869;6.88e-08;32!UBERON:0006947;2.17e-07;3!UBERON:0004054;2.17e-07;3!UBERON:0001950;5.32e-07;20!UBERON:0002791;7.31e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003135,6.39e-12,11;UBERON:0003101,4.66e-10,22;UBERON:0000079,4.66e-10,22;UBERON:0005904,1.04e-09,4;UBERON:0001869,2.44e-08,32;UBERON:0001017,3.87e-08,81;UBERON:0006947,9.49e-08,3;UBERON:0004054,9.49e-08,3;UBERON:0001893,1.07e-07,34;UBERON:0001016,1.47e-07,89;UBERON:0001950,4.59e-07,20;UBERON:0002791,4.65e-07,32;UBERON:0007023,5.60e-07,114;UBERON:0002780,6.14e-07,41;UBERON:0001890,6.14e-07,41;UBERON:0003080,6.14e-07,41;UBERON:0006240,6.14e-07,41;UBERON:0000956,9.69e-07,25;UBERON:0000203,9.69e-07,25 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0.791300934685361,0.123766352960047,0.331397375727916,0,0,0,0,0.61560529038394,0.408001382488506,0.626909442956176,2.0036519099174,0.958120975510189,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.255725123687061,0,0,0.144846518960824,0.795285947051099,0,0.945348171640679,0,0.87834785693126,1.44076983047484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0.44905874525234,0,0,0,0.183201743930407,0,0,0,0,0.506522046658319,0.132409180813219,0.860509862246441,0.354668382198357,1.12135520028461,0,0,1.8672662123986,0,0.490385709340376,0.454072282934794,0,0.468642863667593,0,0,0.298897361103602,0.117434498643765,0,0,0.204154171254893,0.245668634623536,0.309977343527296,1.18800285728205,0,0,0,0,0,0,0,0,0.300476117813194,0.113432183160021,0,0.427114777637135,0,0.600182192168805,0.721367704669072,0,0.18611685633159,0,0.0974370051611986,0.504867548488229,0.184099797284599,2.10139873864455,0.710019185033229,0.503760491138201,0,0,0,0,0.853815942907168,1.45782745153634,0.813357600086629,1.86589899027667,1.51392510525377,1.45990943630332,0,0,0,0,0.721879481669586,0.236613600079688,0,0,0.330881918197182,0,0.237270619111097,0.404493924480493,0,0,0,0,0.8231480226628,0,0,0,0,0,0,0.857839051492628,0,0,0,0,0.977424915930974,1.03993478527958,0,0.463721619900307,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.95597942737566,0.088048434013226,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0.531876233169741,0,0,0,0,1.00084595560703,0,0,0,0.355391948742546,0,0.301439377059586,0,0.399891964728228,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27047312111232,0,2.31986643833309,1.34013012267479,1.91381625495949,0,0,0,0.49076596687656,0,0,0.207970861530807,0.535286966391485,0,0.117141414992713,0,0,0,0,0.184369168541703,0.0868836144680828,0.195801157462741,0,0,0,0,0,0,0.30239029332968,0.248107807818777,0,0.280660094433074,0.128139149255701,0,0.160853921143607,0,0.154209693802656,0,0.164254312027618,0,0,0.241718899183244,0,0.0920809889358963,1.03333003348146,0,0.524497659837696,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0.656029291399411,0.325378394664303,0.206082023295445,0,0,0,0,1.6068392984416,0.096670718292122,0.154048617114644,0,0,0,0,0,0.178064071293475,0,0,0,0,0,0,1.3940745403212,0,0,0.869932992075073,0.18532421910392,0.143124886741991,0,0,0.762520775695299,0.255897791311334,2.56763392820352,0,0,0.899362287916574,1.37268514868027,1.29593642580255,0.202182481573316,0,0.421258456238981,1.46290121726877,0,1.05650146756755,0.9554993798559,3.25232493493539,0,0,0.66343897524122,0,0,0.655894752046633,0.202910376962704,0.30982349809975,0,0,0,0,0.354761064070598,0.211107635297664,0.329294892959902,0.75894634753143,2.0996083214699,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540911356951966,0.33307196799782,0,0,0.439524537815682,0,0,0,0,0,0,0,0.984685914873589,0.111308705022906,0,0.844501632511974,0.398495976502139,1.65770349318689,0.251932747854276,0.102268682502155,0,0,0.0898683511473268,0.179021174675609,0,1.479651084554,0,0,0.969332746095218,0.834912883456661,1.99613798001194,1.04171104434093,0.437299999980979,0,0.1137934482855,0,0.236387681767936,0,0.291604613383254,0.520874984799877,0,1.20596438625408,0,0.110579259931225,0,0.219385397153973,0.32681539055697,0.697118721393016,4.69396576873162,0.341826167541004,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0.973033209536731,0.611030144933625,0,0,0,0.808813595768125,0.802577647298789,0.234264445725339,0,0.391329237864179,0,1.57833761139756,1.20990716048664,1.53036380815245,0.884612114798832,0.751617097072463,0.103688191397247,0,0,0,0,0,0,0,0,0.0870592065804026,1.7472666824203,0.51595809741485,0,0.0730893170861856,0.164230914106418,0.872901148395775,0,1.35588444468319,0,0,0.823040347426423,2.54216797555244,0,2.34798294213288,0,0.288180834308212,0.458146384663663,0.171594997861965,0,0,0,0,0,0.101998217636322,1.73370353940911,0,0,0,0,0,0.837847203816763,0.458320848023367,0,0,0,0.446342914883745,0.940568614814168,0,3.49487848582361,0,0,0,0.0984274815147488,0.169346664131569,0.795229689809303,0.272406812223151,0.643012593860077,0.962776056180637,0.83088067605837,0,0,1.15424157650247,0.670869375198532,0.0788057072991982,0.996637174564964,0,0.35857467866569,0,0,0,0,1.62899880526114,0,0.979762080328227,0,0,0,0,0,0,0.775697738169303,0.13223260174269,0.684347351537318,0,0.106787412567695,0.471612915298998,0.828478110694391,0,0,0,0,1.08803560673895,0.2506898940227,0,1.96723578425883,0.157054096250234,1.77213635993397,0.610131324509816,0.625954653532499,0.573409195690071,0.332787154610557,0.993542447062135,7.88587219136516,0,0,0,0,1.40500471742064,0.144921028610825,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| ||
|short_description=p13@PBX1 | |short_description=p13@PBX1 | ||
}} | }} |
Latest revision as of 09:12, 18 September 2015
Short description: | p13@PBX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_PBX1_5end |
Coexpression cluster: | C2537_uterus_occipital_cervix_rectum_mesothelioma_Cardiac_parietal |
Association with transcript: | -61bp_to_ENST00000367897, ENST00000401534, ENST00000498497, ENST00000540236, ENST00000559240_5end |
EntrezGene: | PBX1 |
HGNC: | 8632 |
UniProt: | F5H4U9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
male reproductive organ | 6.39e-12 | 11 |
male organism | 4.66e-10 | 22 |
male reproductive system | 4.66e-10 | 22 |
duct of male reproductive system | 1.04e-09 | 4 |
cerebral hemisphere | 2.44e-08 | 32 |
central nervous system | 3.87e-08 | 81 |
male genital duct | 9.49e-08 | 3 |
internal male genitalia | 9.49e-08 | 3 |
telencephalon | 1.07e-07 | 34 |
nervous system | 1.47e-07 | 89 |
neocortex | 4.59e-07 | 20 |
regional part of telencephalon | 4.65e-07 | 32 |
adult organism | 5.60e-07 | 114 |
regional part of forebrain | 6.14e-07 | 41 |
forebrain | 6.14e-07 | 41 |
anterior neural tube | 6.14e-07 | 41 |
future forebrain | 6.14e-07 | 41 |
cerebral cortex | 9.69e-07 | 25 |
pallium | 9.69e-07 | 25 |