FFCP PHASE1:Hg19::chr15:42185181..42185189,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100289090 | |EntrezGene=100289090 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=190bp_to_ENST00000309874,uc010bcp.1_5end | |association_with_transcript=190bp_to_ENST00000309874,uc010bcp.1_5end | ||
|cluster_id=chr15:42185181..42185189,+ | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_2_at_LOC100289090_5end | |description=CAGE_peak_2_at_LOC100289090_5end | ||
|id=chr15:42185181..42185189,+ | |id=chr15:42185181..42185189,+ | ||
|ontology_enrichment_celltype=CL:0000791!7.92e-41!18;CL:0000789!7.92e-41!18;CL:0002420!7.92e-41!18;CL:0002419!7.92e-41!18;CL:0000790!7.92e-41!18;CL:0000625!1.01e-28!11;CL:0000084!5.55e-28!25;CL:0000827!5.55e-28!25;CL:0000624!2.19e-16!6;CL:0000838!6.20e-16!52;CL:0000542!1.58e-15!53;CL:0000051!1.58e-15!53;CL:0000738!2.75e-13!140;CL:0002087!1.19e-12!119;CL:0000037!3.46e-09!172;CL:0000566!3.46e-09!172;CL:0000623!5.82e-09!3;CL:0000825!5.82e-09!3;CL:0002031!5.92e-09!124;CL:0000898!6.99e-09!3;CL:0000842!7.97e-09!3;CL:0000988!3.18e-08!182;CL:0000767!6.50e-08!3;CL:0002032!1.28e-07!165;CL:0000837!1.28e-07!165 | |ontology_enrichment_celltype=CL:0000791!7.92e-41!18;CL:0000789!7.92e-41!18;CL:0002420!7.92e-41!18;CL:0002419!7.92e-41!18;CL:0000790!7.92e-41!18;CL:0000625!1.01e-28!11;CL:0000084!5.55e-28!25;CL:0000827!5.55e-28!25;CL:0000624!2.19e-16!6;CL:0000838!6.20e-16!52;CL:0000542!1.58e-15!53;CL:0000051!1.58e-15!53;CL:0000738!2.75e-13!140;CL:0002087!1.19e-12!119;CL:0000037!3.46e-09!172;CL:0000566!3.46e-09!172;CL:0000623!5.82e-09!3;CL:0000825!5.82e-09!3;CL:0002031!5.92e-09!124;CL:0000898!6.99e-09!3;CL:0000842!7.97e-09!3;CL:0000988!3.18e-08!182;CL:0000767!6.50e-08!3;CL:0002032!1.28e-07!165;CL:0000837!1.28e-07!165 | ||
|ontology_enrichment_celltype_v019=CL:0000791;8.84e-73;18!CL:0000789;8.84e-73;18!CL:0002419;8.84e-73;18!CL:0000084;2.72e-51;25!CL:0000625;1.06e-50;11!CL:0000624;5.35e-28;6!CL:0000542;5.38e-15;53!CL:0000898;1.19e-14;3!CL:0000815;1.60e-10;2!CL:0000792;1.60e-10;2!CL:0002677;1.60e-10;2!CL:0000623;1.18e-07;3!CL:0000226;2.24e-07;3!CL:0000842;2.24e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,4.27e-73,18;CL:0000789,4.27e-73,18;CL:0002420,4.27e-73,18;CL:0002419,4.27e-73,18;CL:0000790,4.27e-73,18;CL:0000084,1.62e-51,25;CL:0000827,1.62e-51,25;CL:0000625,1.05e-50,11;CL:0000838,5.66e-29,52;CL:0000542,2.43e-28,53;CL:0000051,2.43e-28,53;CL:0000624,2.52e-28,6;CL:0000898,9.23e-15,3;CL:0002087,2.08e-13,115;CL:0000738,6.27e-12,136;CL:0000815,1.72e-10,2;CL:0000792,1.72e-10,2;CL:0002677,1.72e-10,2;CL:0002031,5.91e-10,120;CL:0000037,9.71e-09,168;CL:0000988,4.70e-08,177;CL:0000623,1.22e-07,3;CL:0000825,1.22e-07,3;CL:0000226,1.69e-07,3;CL:0000842,1.69e-07,3;CL:0002032,2.57e-07,161;CL:0000837,2.57e-07,161 | |||
|ontology_enrichment_development_v019=CL:0000790;8.84e-73;18!CL:0000051;5.38e-15;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!8.09e-13!15;UBERON:0000179!8.09e-13!15;UBERON:0000463!8.09e-13!15 | |ontology_enrichment_uberon=UBERON:0000178!8.09e-13!15;UBERON:0000179!8.09e-13!15;UBERON:0000463!8.09e-13!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.76e-18;15!UBERON:0000179;1.76e-18;15!UBERON:0000463;1.76e-18;15!UBERON:0002390;7.55e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.41e-18,15;UBERON:0000179,1.41e-18,15;UBERON:0000463,1.41e-18,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0.383829398097213,0.464448369948228,0,0,0,0,0,0,0.553995408531877,0.601633342410425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0.224723484445085,0,0,0,0,0.199463657621632,0.426224750532694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,2.75393678159366,2.75107533924415,2.46721798799411,1.33749196312542,1.30368906653436,3.31413464014313,1.94826728407911,0.891283655081389,3.24066498222321,0.443067789167242,2.70803863765016,0.768547918354051,1.04047478047903,0.164437904603676,0,0,2.07601188426885,1.60524496853828,3.1360657141493,1.69964014046349,1.91610246800961,5.15441168223945,2.02415753615602,1.59282707162048,1.95325036156926,4.75226022224187,2.40920190524436,2.43174561193395,1.24930726552346,2.60454977248419,2.46338399076314,5.84659555351724,5.34880391567015,2.02754165435919,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.34952292343276,3.01878604803324,0.77005821767849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68798433959754,0.647142602455851,2.77491650288955,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52927441428475,0,1.66762242820452,1.23408681925858,1.29694662238543,1.62009431171434,2.37937552888281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0.221158519862449,0.295547618953547,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250381861413,0,0,0,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785201868921944,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193373663920732,0,0,0,0,0,0,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0.0645889098360061,0.186224142887574,0,0,0.202117188958219,0,0,0.202056159043763,0,0,0,0,0,0,0,0,0,0,1.20764276154616,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0.383829398097213,0.464448369948228,0,0,0,0,0,0,0.553995408531877,0.601633342410425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0.224723484445085,0,0,0,0,0.199463657621632,0.426224750532694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,2.75393678159366,2.75107533924415,2.46721798799411,1.33749196312542,1.30368906653436,3.31413464014313,1.94826728407911,0.891283655081389,3.24066498222321,0.443067789167242,2.70803863765016,0.768547918354051,1.04047478047903,0.164437904603676,0,0,2.07601188426885,1.60524496853828,3.1360657141493,1.69964014046349,1.91610246800961,5.15441168223945,2.02415753615602,1.59282707162048,1.95325036156926,4.75226022224187,2.40920190524436,2.43174561193395,1.24930726552346,2.60454977248419,2.46338399076314,5.84659555351724,5.34880391567015,2.02754165435919,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.34952292343276,3.01878604803324,0.77005821767849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68798433959754,0.647142602455851,2.77491650288955,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52927441428475,0,1.66762242820452,1.23408681925858,1.29694662238543,1.62009431171434,2.37937552888281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0.221158519862449,0.295547618953547,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250381861413,0,0,0,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785201868921944,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193373663920732,0,0,0,0,0,0,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0.0645889098360061,0.186224142887574,0,0,0.202117188958219,0,0,0.202056159043763,0,0,0,0,0,0,0,0,0,0,1.20764276154616,0 | ||
|short_description=p2@LOC100289090 | |short_description=p2@LOC100289090 | ||
}} | }} |
Latest revision as of 15:14, 17 September 2015
Short description: | p2@LOC100289090 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LOC100289090_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 190bp_to_ENST00000309874, uc010bcp.1_5end |
EntrezGene: | LOC100289090 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 4.27e-73 | 18 |
alpha-beta T cell | 4.27e-73 | 18 |
immature T cell | 4.27e-73 | 18 |
mature T cell | 4.27e-73 | 18 |
immature alpha-beta T cell | 4.27e-73 | 18 |
T cell | 1.62e-51 | 25 |
pro-T cell | 1.62e-51 | 25 |
CD8-positive, alpha-beta T cell | 1.05e-50 | 11 |
lymphoid lineage restricted progenitor cell | 5.66e-29 | 52 |
lymphocyte | 2.43e-28 | 53 |
common lymphoid progenitor | 2.43e-28 | 53 |
CD4-positive, alpha-beta T cell | 2.52e-28 | 6 |
naive T cell | 9.23e-15 | 3 |
nongranular leukocyte | 2.08e-13 | 115 |
leukocyte | 6.27e-12 | 136 |
regulatory T cell | 1.72e-10 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.72e-10 | 2 |
naive regulatory T cell | 1.72e-10 | 2 |
hematopoietic lineage restricted progenitor cell | 5.91e-10 | 120 |
hematopoietic stem cell | 9.71e-09 | 168 |
hematopoietic cell | 4.70e-08 | 177 |
natural killer cell | 1.22e-07 | 3 |
pro-NK cell | 1.22e-07 | 3 |
single nucleate cell | 1.69e-07 | 3 |
mononuclear cell | 1.69e-07 | 3 |
hematopoietic oligopotent progenitor cell | 2.57e-07 | 161 |
hematopoietic multipotent progenitor cell | 2.57e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
blood | 1.41e-18 | 15 |
haemolymphatic fluid | 1.41e-18 | 15 |
organism substance | 1.41e-18 | 15 |