FFCP PHASE1:Hg19::chr15:39882095..39882106,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:39882095..39882106,+ | |||
|coexpression_cluster_id=C453 | |||
|description=CAGE_peak_at_chr15:39882095..39882106,+ | |description=CAGE_peak_at_chr15:39882095..39882106,+ | ||
|id=chr15:39882095..39882106,+ | |id=chr15:39882095..39882106,+ | ||
|ontology_enrichment_celltype=CL:0002139!2.31e-12!24;CL:0000057!7.12e-10!75;CL:0000115!7.79e-10!35;CL:0000071!1.10e-07!18;CL:0002546!1.10e-07!18;CL:0002334!1.77e-07!12;CL:0002078!2.01e-07!44;CL:0005020!8.88e-07!6;CL:0002138!8.88e-07!6;CL:0005022!8.88e-07!6 | |ontology_enrichment_celltype=CL:0002139!2.31e-12!24;CL:0000057!7.12e-10!75;CL:0000115!7.79e-10!35;CL:0000071!1.10e-07!18;CL:0002546!1.10e-07!18;CL:0002334!1.77e-07!12;CL:0002078!2.01e-07!44;CL:0005020!8.88e-07!6;CL:0002138!8.88e-07!6;CL:0005022!8.88e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002580;1.38e-12;3!CL:0000197;4.56e-11;6!CL:0000098;4.56e-11;6!CL:0002167;4.56e-11;6!CL:0002334;3.86e-08;12!CL:0002139;4.46e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0002580,6.48e-13,3;CL:0000197,2.22e-11,6;CL:0000098,2.22e-11,6;CL:0002167,2.22e-11,6;CL:0002334,2.88e-08,12;CL:0000057,3.56e-07,76;CL:0002139,6.32e-07,24 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3307;8.15e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,8.19e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0000055!1.38e-10!69;UBERON:0004872!5.32e-10!84;UBERON:0002049!1.76e-08!79;UBERON:0007798!1.76e-08!79;UBERON:0001981!3.42e-08!60;UBERON:0007500!3.42e-08!60;UBERON:0004537!3.42e-08!60;UBERON:0006965!3.42e-08!60;UBERON:0001986!1.10e-07!18;UBERON:0004638!1.10e-07!18;UBERON:0004852!1.10e-07!18;UBERON:0004535!2.76e-07!110;UBERON:0003914!3.48e-07!118;UBERON:0001009!8.68e-07!113;UBERON:0003688!8.70e-07!6;UBERON:0002358!8.70e-07!6;UBERON:0003684!8.70e-07!6;UBERON:0001178!8.70e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0005406;4.45e-09;2!UBERON:0003688;9.83e-07;6!UBERON:0002358;9.83e-07;6!UBERON:0003684;9.83e-07;6!UBERON:0001178;9.83e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005406,3.37e-09,2 | |||
|phase1_expression=0.726713517082227,1.71280419112787,0.563817616383885,3.00219895059391,1.34088328328186,2.61701557230111,0,0,0,0,0.697801167972428,0.436882744260345,0.527533956456907,0,0.331397375727916,0,0,0.730310090387373,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0.369754010166788,0,0,0,0,0.401088894940283,0,0,0,0,0,0,0,0.232429036905685,0,0,0.575384784644301,0,0,0,0,0,0,0,0.224723484445085,1.22433556948361,0.320929027076094,0,0.659702600373432,0,0,1.16083695451434,0,0,0.502497330513487,0,0,0.605399502633369,0,0,0,0,0,0.112328631146495,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0.361439152384566,1.00267582127178,0,0,1.45990461090791,0,0,0,0,0,0,0,0,0,0,0,0,0.39752481473341,0.860234595106124,1.04142150482278,2.26123176769604,0.838998872419812,0,0.208994966536811,0.258416759169329,0.71153252537342,0.66944122552934,0.402829317109147,0,0.24406205754817,0,1.62028389576352,0.267899184852239,1.12264686313085,1.0135033243499,0,0,0.549605231791222,0,0,0.436094052142534,5.4666914686485,0.25326102332916,0.397227542439656,0.573673241497627,0,0,0,0.49333509683432,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,1.48360157567134,0,0,0,0,0,2.19488810440419,0.919463387397059,1.50238058906597,0.113432183160021,2.15267562826634,1.70845911054854,0.847727604638247,0,0.92747276314595,1.03056216018252,0.37223371266318,0.843881661206331,0.389748020644795,1.00973509697646,0.460249493211497,0.646584227275248,0,0.302256294682921,0.339121184620975,0,0.272746120590835,0.286804595389004,0,0,0.116193942869518,0,0,0,0,1.28648187638577,0,0.464367928031979,0,0.118306800039844,0,0.241011029883482,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.219500570817251,0,0,0,0,0,0,0,0.117408694235822,0.721832238805369,1.38895653772983,1.14152491340759,0,0,0,0,0,0,0.671928512795438,0.425325291727159,0.0895585227028483,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0.531876233169741,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0.289562613335158,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66376689224646,3.21172179834891,1.73472656537328,2.34282829985426,0.601892199455438,0,0,0,0.184369168541703,0.173767228936166,0,0,0,0,0,0,1.66435439510497,0.604780586659361,1.48864684691266,2.60885354589706,1.68396056659844,0.256278298511402,2.04682899626681,0.321707842287215,1.48418066444991,0.154209693802656,0.355123450626254,0.164254312027618,0,0,0,0.40101294060657,0,0,0,0,0,0,0,0,0.105551628892876,0,0.510281115829547,0.647747748306418,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0,1.15314040419064,0.510450849978337,0.2023155617111,0,1.5740617341532,0.6970372701606,0,0,0,0.37064843820784,0,0,0,0,0,0,0,0,0,0,0.235624804691373,0,0,0,0,0,2.11300293513511,0,0,0,0,0.66343897524122,0,0,0,0.405820753925408,0.30982349809975,0,0.286822704408103,0.0982490410131212,0.35667105148125,0,0,0,0,0,0,0.670302275535787,0,0,0.43050537267123,0,0,0.459446800413919,0,0,0,0,0.411362273086194,0,0,0,0,3.84991942105343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19372242368845,0,2.76444631889309,0,0,0.111308705022906,0,0,0,0,0,0,0,1.24415835064723,0.898683511473268,0,0,0.197286811273867,0,1.11136990144637,0,0,0,0,0,0,0.1137934482855,0,0.236387681767936,0,0,0,0,0,0,0.110579259931225,0,0,0.10893846351899,0.139423744278603,0,0.113942055847001,0,0,0,0,0.457987967009312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0.330991955875499,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0.320635281006135,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,1.71906176567983,0,0.279282401272254,0,0,0,0,0,0.0671834724867263,9.00749708856009,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0.714695326373367,0.662091970365432,0,0,0,0,0,0,3.06698439213759,0,0,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0.15543720058278,0.147855149989634,0.159296767163702,0,0,0,0,0.521745061811734,0,0,0,0,0,0.464033759878494,0.398095888698616,0.400027764663154,0,0.336749488765919,0,0,0,0.260994291965212,0.680117776536817,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,1.13503190713367,0,0,0,0,0,0,0,0,0,0,0,0.954013051960256,0,0,0.705351887381368,0.6124909547064,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,1.1441462864015,0,0,0.0752103283492573,0.20170506870352,0,0,0.818859587550484,0.147856086217045,0,0,0,0,0,0,0.496211178389294,0,0.127762427639595,0,0,0,0,0,0,0.514464028312255,0,0,0,0.111231401892069,0,0,0.280272163313789,0,0.215927591218621,0,0,0,0,0.173858272302579,4.00855682365126,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0,0,0,5.94744901407359,0.0939839179798536,0.128915775947154,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0.462175628631418,0.865253124247578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0.0673520530145875,0,0,0,0,5.7921684686082,0,0,0,0,0,0,0 | |phase1_expression=0.726713517082227,1.71280419112787,0.563817616383885,3.00219895059391,1.34088328328186,2.61701557230111,0,0,0,0,0.697801167972428,0.436882744260345,0.527533956456907,0,0.331397375727916,0,0,0.730310090387373,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0.369754010166788,0,0,0,0,0.401088894940283,0,0,0,0,0,0,0,0.232429036905685,0,0,0.575384784644301,0,0,0,0,0,0,0,0.224723484445085,1.22433556948361,0.320929027076094,0,0.659702600373432,0,0,1.16083695451434,0,0,0.502497330513487,0,0,0.605399502633369,0,0,0,0,0,0.112328631146495,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0.361439152384566,1.00267582127178,0,0,1.45990461090791,0,0,0,0,0,0,0,0,0,0,0,0,0.39752481473341,0.860234595106124,1.04142150482278,2.26123176769604,0.838998872419812,0,0.208994966536811,0.258416759169329,0.71153252537342,0.66944122552934,0.402829317109147,0,0.24406205754817,0,1.62028389576352,0.267899184852239,1.12264686313085,1.0135033243499,0,0,0.549605231791222,0,0,0.436094052142534,5.4666914686485,0.25326102332916,0.397227542439656,0.573673241497627,0,0,0,0.49333509683432,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,1.48360157567134,0,0,0,0,0,2.19488810440419,0.919463387397059,1.50238058906597,0.113432183160021,2.15267562826634,1.70845911054854,0.847727604638247,0,0.92747276314595,1.03056216018252,0.37223371266318,0.843881661206331,0.389748020644795,1.00973509697646,0.460249493211497,0.646584227275248,0,0.302256294682921,0.339121184620975,0,0.272746120590835,0.286804595389004,0,0,0.116193942869518,0,0,0,0,1.28648187638577,0,0.464367928031979,0,0.118306800039844,0,0.241011029883482,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.219500570817251,0,0,0,0,0,0,0,0.117408694235822,0.721832238805369,1.38895653772983,1.14152491340759,0,0,0,0,0,0,0.671928512795438,0.425325291727159,0.0895585227028483,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0.531876233169741,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0.289562613335158,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66376689224646,3.21172179834891,1.73472656537328,2.34282829985426,0.601892199455438,0,0,0,0.184369168541703,0.173767228936166,0,0,0,0,0,0,1.66435439510497,0.604780586659361,1.48864684691266,2.60885354589706,1.68396056659844,0.256278298511402,2.04682899626681,0.321707842287215,1.48418066444991,0.154209693802656,0.355123450626254,0.164254312027618,0,0,0,0.40101294060657,0,0,0,0,0,0,0,0,0.105551628892876,0,0.510281115829547,0.647747748306418,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0,1.15314040419064,0.510450849978337,0.2023155617111,0,1.5740617341532,0.6970372701606,0,0,0,0.37064843820784,0,0,0,0,0,0,0,0,0,0,0.235624804691373,0,0,0,0,0,2.11300293513511,0,0,0,0,0.66343897524122,0,0,0,0.405820753925408,0.30982349809975,0,0.286822704408103,0.0982490410131212,0.35667105148125,0,0,0,0,0,0,0.670302275535787,0,0,0.43050537267123,0,0,0.459446800413919,0,0,0,0,0.411362273086194,0,0,0,0,3.84991942105343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19372242368845,0,2.76444631889309,0,0,0.111308705022906,0,0,0,0,0,0,0,1.24415835064723,0.898683511473268,0,0,0.197286811273867,0,1.11136990144637,0,0,0,0,0,0,0.1137934482855,0,0.236387681767936,0,0,0,0,0,0,0.110579259931225,0,0,0.10893846351899,0.139423744278603,0,0.113942055847001,0,0,0,0,0.457987967009312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0.330991955875499,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0.320635281006135,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,1.71906176567983,0,0.279282401272254,0,0,0,0,0,0.0671834724867263,9.00749708856009,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0.714695326373367,0.662091970365432,0,0,0,0,0,0,3.06698439213759,0,0,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0.15543720058278,0.147855149989634,0.159296767163702,0,0,0,0,0.521745061811734,0,0,0,0,0,0.464033759878494,0.398095888698616,0.400027764663154,0,0.336749488765919,0,0,0,0.260994291965212,0.680117776536817,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,1.13503190713367,0,0,0,0,0,0,0,0,0,0,0,0.954013051960256,0,0,0.705351887381368,0.6124909547064,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,1.1441462864015,0,0,0.0752103283492573,0.20170506870352,0,0,0.818859587550484,0.147856086217045,0,0,0,0,0,0,0.496211178389294,0,0.127762427639595,0,0,0,0,0,0,0.514464028312255,0,0,0,0.111231401892069,0,0,0.280272163313789,0,0.215927591218621,0,0,0,0,0.173858272302579,4.00855682365126,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0,0,0,5.94744901407359,0.0939839179798536,0.128915775947154,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0.462175628631418,0.865253124247578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0.0673520530145875,0,0,0,0,5.7921684686082,0,0,0,0,0,0,0 | ||
|short_description=p@chr15:39882095..39882106,+ | |short_description=p@chr15:39882095..39882106,+ | ||
}} | }} |
Latest revision as of 01:17, 25 July 2015
Short description: | p@chr15:39882095..39882106, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:39882095..39882106, + |
Coexpression cluster: | C453_hepatic_Ewing_neurofibroma_spindle_tridermal_Olfactory_bone |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte of the breast | 6.48e-13 | 3 |
receptor cell | 2.22e-11 | 6 |
sensory epithelial cell | 2.22e-11 | 6 |
olfactory epithelial cell | 2.22e-11 | 6 |
preadipocyte | 2.88e-08 | 12 |
fibroblast | 3.56e-07 | 76 |
endothelial cell of vascular tree | 6.32e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
perirenal fat | 3.37e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
teratoma | 8.19e-10 | 2 |